raab/competition_experiments
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  • 09d1ed2c57 added figures ... could kill the whale :D master Till Raab 2024-01-19 11:52:03 +01:00
  • 69190eb6db stuff with figures and videos Till Raab 2023-12-05 15:15:09 +01:00
  • 35dc062164 plotting and video stuff Till Raab 2023-12-04 12:21:18 +01:00
  • a00823b161 Merge branch 'master' of https://whale.am28.uni-tuebingen.de/git/raab/competition_experiments Till Raab 2023-12-04 11:24:47 +01:00
  • 55de424247 example trials reworked Till Raab 2023-12-04 11:23:33 +01:00
  • 054998b728 i dont know Till Raab 2023-12-01 13:56:54 +01:00
  • 1414625567 added figures Till Raab 2023-12-01 09:45:24 +01:00
  • 8fe91dc7ff event videos now take rises and chirps from nns Till Raab 2023-11-30 15:18:28 +01:00
  • 2c4465eae4 reworked code to make nice plots for my presentation Till Raab 2023-11-28 14:50:57 +01:00
  • 284d30ad18 created tex file and moved code and figures to different folder Till Raab 2023-08-14 07:29:57 +02:00
  • 7cda7755af agonistic categories done. only adapt time axis Till Raab 2023-08-10 15:41:28 +02:00
  • 7e55ba3b09 illustation of agonistic categories nearly completed. cleaned up associated code Till Raab 2023-08-09 15:26:03 +02:00
  • 48314b363f examples are nice... make a function, clean it up Till Raab 2023-08-09 13:05:00 +02:00
  • 4c3bd818b9 worked on categorization of agonistic interactions Till Raab 2023-08-08 16:06:54 +02:00
  • dca11a7860 get to know my code again XD Till Raab 2023-08-07 14:12:19 +02:00
  • 159c1060bc dada Till Raab 2023-06-29 12:32:53 +02:00
  • 8e3eb7722b burst analysis does not lead to something. adapt existing figures extend before/past agonistic for the corresponding subplots. Complete categorical analysis to complement ethogram stuff Till Raab 2023-06-28 12:50:10 +02:00
  • 8cc5d5e087 started chirp burst analysis Till Raab 2023-06-27 15:15:56 +02:00
  • 49c071e820 chirp distribution in chasing events are not so clear. maybe detect chirp bursts and calculate time correlations with their on/offsets Till Raab 2023-06-26 14:34:44 +02:00
  • ea9d5f22f8 fix Nvidia shit and compute event time correlations that have been added. event time analysis now include analysis on chirpt times/quantity during or relative to chasings. this about this again. Till Raab 2023-06-23 14:21:28 +02:00
  • fa6ed5b3b3 included temporal correlation of chirps cented on rises win/lose. Till Raab 2023-06-23 10:37:48 +02:00
  • a038c2f696 markov models and iei interval analysis completed Till Raab 2023-06-19 15:28:53 +02:00
  • 3a4ece9902 savety Till Raab 2023-06-19 14:33:32 +02:00
  • 988d80f7bd work in progress Till Raab 2023-06-16 15:37:54 +02:00
  • d11c83b46f savety commit Till Raab 2023-06-16 11:14:59 +02:00
  • cabb3bd2c9 savety commit Till Raab 2023-06-16 11:12:35 +02:00
  • e22108cdd7 add void to ethogram. ethogram is now colorful :D Till Raab 2023-06-16 10:52:09 +02:00
  • 725c0b426a make chirp-chrip cross correlation. marcov model works but requires refinement. arrows from each node should sum up to 100pct ?! Till Raab 2023-06-14 15:05:49 +02:00
  • 8af8c92b27 abs dEODf correlation with lose chrips and med chase duration. chirps look like mexwell distribution. Till Raab 2023-06-14 10:09:20 +02:00
  • 96cb4b607c dada Till Raab 2023-06-13 14:28:04 +02:00
  • e2c284ea76 adapted code in a way that rise analysis include more recordings. chirp analysis skip those marked as bad by patrick Till Raab 2023-06-13 09:22:33 +02:00
  • 50c762ab8d adapted code to compute statistics correctly: trial_mask. done for trial_summary_eval.py. The rest is missing. DO IT. Next and last script: marcov model Till Raab 2023-06-12 15:28:32 +02:00
  • 3122cb10dc trial summary now includes information about agonistic counts and competition duratin ala ana silva. started to adapt trial_summary_eval.py accordingly to evaluate this Till Raab 2023-06-09 13:23:43 +02:00
  • 47a1ac1058 forgot the commit and push on wednesday Till Raab 2023-06-09 07:58:56 +02:00
  • 07daf7457c alot of statistics Till Raab 2023-06-06 16:56:16 +02:00
  • bb45677bd1 analysis almost complete Till Raab 2023-06-05 15:40:46 +02:00
  • 11b58dda36 event vs. time pir charts done Till Raab 2023-06-02 11:04:08 +02:00
  • 14c7538cb9 event time analysis continued... not much left Till Raab 2023-06-01 14:53:05 +02:00
  • f096e9ba4f inter event interval analysis done. make function more universial. relative rate progresion of ecent evaluated Till Raab 2023-06-01 10:46:13 +02:00
  • 4c013ab869 time series analysis... excluded chirps in event time correlations. maybe check plots again Till Raab 2023-05-31 10:49:29 +02:00
  • aa200cf049 changed name of time correlation script to event_time_correlations.py Till Raab 2023-05-31 09:25:38 +02:00
  • 32bcb3aeea temporal correlations for all logical combinations?! Till Raab 2023-05-31 08:06:16 +02:00
  • e3a5cadc0c works nice... adapt loop and clean up the code. Till Raab 2023-05-30 15:03:48 +02:00
  • fbad4ffa4b plot looks nice. Till Raab 2023-05-30 13:15:45 +02:00
  • 4d045d6ed0 cross correlations now work... alter code in a way that time axis can be defined out of functions. inlude raster. adapt code for other event combinations Till Raab 2023-05-30 11:45:02 +02:00
  • 90424c2c46 added meta files for convinience Till Raab 2023-05-30 07:07:29 +02:00
  • 7a5c5cfd0e bf. Monday I need to look into the norming of the kde curves... ToDo comment in one section Till Raab 2023-05-26 15:34:41 +02:00
  • aec5e298bc plot Till Raab 2023-05-26 15:33:23 +02:00
  • 8a9ec1beed bf Till Raab 2023-05-26 15:20:12 +02:00
  • cb37108220 bf Till Raab 2023-05-26 15:17:58 +02:00
  • caa01a3005 bf Till Raab 2023-05-26 10:42:25 +02:00
  • 0e36d12419 bug fix Till Raab 2023-05-26 10:33:16 +02:00
  • d6448209e0 bug fix Till Raab 2023-05-26 10:32:06 +02:00
  • b80a2c8de9 print statement to assess bootstrap speed Till Raab 2023-05-26 10:30:35 +02:00
  • 11c015b1c2 bug fix Till Raab 2023-05-26 10:26:29 +02:00
  • 9cc35819a0 bug fix Till Raab 2023-05-26 10:24:48 +02:00
  • 399197d2b1 bug fix Till Raab 2023-05-26 10:09:26 +02:00
  • 6d7e58ef80 boot implementations using cupy Till Raab 2023-05-26 10:06:02 +02:00
  • d8d28df2ea test Till Raab 2023-05-26 08:40:14 +02:00
  • 4f64aa6668 event time ananlysis started. tried to implement bootstrap with cupy ... memory issues ... resolve on monday Till Raab 2023-05-25 15:39:04 +02:00
  • d9d9982635 meta analysis continues... next step would be to load the time series data and calculate cross correlations Till Raab 2023-05-23 14:53:46 +02:00
  • 8c1f85f89e cleaned code Till Raab 2023-05-23 11:01:59 +02:00
  • 5af9a25dfd continued meta analysis Till Raab 2023-05-22 15:15:16 +02:00
  • 42640c17d9 evaluation of the trial_summary initiated. Now the fun beginns Till Raab 2023-05-19 13:17:26 +02:00
  • 3c9bbb6a91 bf Till Raab 2023-05-19 08:17:31 +02:00
  • 83d5e3164b include mean shelter power (which denfines winner) to plot. Till Raab 2023-05-19 08:15:47 +02:00
  • 922c938fb6 save ids in trial analysis Till Raab 2023-05-19 07:57:34 +02:00
  • 38b4b6800c sex assignment works. maybe rewrite trial analyis in a way that everything is saved with reference to ids not winner/loser... seems to be fishy. Till Raab 2023-05-17 15:15:15 +02:00
  • c7725c4e01 meta data collection nearly finished. Need to assign sexes based on EODf25 mean of each fish at the end. I got issues with winner detection in the trial_analyis.py --> results inconcurrent with csv values. plot mean/median shelter power used for winner assignment Till Raab 2023-05-17 14:32:34 +02:00
  • 8517014571 created DataFrame containing trail data for corrections. Next would be to get to know sexes: load baseline -> q10 comp freqs -> > 749 == f Till Raab 2023-05-16 15:12:24 +02:00
  • fdd5e1cc01 continued on analysis ... included the calculus of mean_l and w and detected all LED_frames Till Raab 2023-05-15 15:20:07 +02:00
  • c6254eac59 LED_detect.py needs to be done for all recordings. next we need to check if trial_analysis.py does everything we need. Till Raab 2023-04-27 15:40:44 +02:00
  • 4c7a26c5fc recalculate boris times correctly ... and then start analysis ... thats why only group 5 and 6 can be used Till Raab 2023-04-26 16:09:42 +02:00
  • 21c2992067 idk Till Raab 2023-04-26 09:21:09 +02:00
  • 92275cfab9 files to analyse competition experiments tillraab 2022-07-11 16:29:58 +02:00
  • a70ba50037 all files for init commit added tillraab 2022-06-02 13:51:21 +02:00