Alexander/P-unit_model
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  • 12c21cb740 reduce start parameters master alexanderott 2021-06-07 09:48:02 +0200
  • 4a6eda070a add rectified stimulus array to the power of 3 alexanderott 2021-06-07 09:27:04 +0200
  • 9d68799c63 stuff alexanderott 2021-06-07 09:26:21 +0200
  • ccca6e030b tau calculation and more alexanderott 2021-05-22 13:10:15 +0200
  • 2a351795ad base support and visuals for repros alexanderott 2021-02-13 21:30:29 +0100
  • 00843beb05 improve analysis alexanderott 2021-02-13 11:36:17 +0100
  • f7926e02f5 gui testing alexanderott 2021-02-13 11:34:09 +0100
  • bfaaa2a580 start spike redetect gui script alexanderott 2021-02-13 11:31:38 +0100
  • e5af50def8 prepare for fit on kraken alexanderott 2021-02-03 14:17:15 +0100
  • 919a63b36a change noise term back to the output alexanderott 2021-02-03 13:02:27 +0100
  • 24bed729c3 add noise to the dendrite not the outputcd PycharmProjects/neuronModel/ alexanderott 2021-02-03 12:38:53 +0100
  • b51cdbfaaf change hardcoded folders for local analysis alexanderott 2021-01-30 15:53:18 +0100
  • 8b45d75afa add function to get sam traces alexanderott 2021-01-30 15:52:21 +0100
  • 9eadffee84 add eod freq to fi-curve in masterplot alexanderott 2021-01-30 15:51:34 +0100
  • 365b108daf add additional penalty for freqs above the eod_freq in f_zero error alexanderott 2021-01-30 15:50:29 +0100
  • ad7a8bcfd3 increase f_zero points weight alexanderott 2021-01-10 00:08:40 +0100
  • ea580863b1 restructure project alexanderott 2021-01-09 23:59:34 +0100
  • 309b30b9fa prepare for 'sam fitting' alexanderott 2021-01-03 13:23:22 +0100
  • 8a806334bd Merge branch 'master' of https://github.com/Nyxas/neuronModel alexanderott 2021-01-03 13:13:51 +0100
  • ba2c43c69e another source alexanderott 2021-01-03 13:13:37 +0100
  • 804f94ad0b stuff a.ott 2021-01-03 13:11:05 +0100
  • 40bb5ddd2b axon delay fit + presentation a.ott 2020-12-07 18:29:52 +0100
  • b6a7bfabe2 solved conflict updated figure in masterthesis to the correct one a.ott 2020-12-07 14:22:44 +0100
  • f08f962bf3 various a.ott 2020-12-07 10:19:26 +0100
  • cb9a16aa47 abstract alexanderott 2020-09-21 07:57:49 +0200
  • 0a3bd5966d corrected with help of Vanessa and Elias alexanderott 2020-09-21 00:05:45 +0200
  • 5d009b29d7 add sources a.ott 2020-09-20 13:36:23 +0200
  • 44174e608f version 1 results a.ott 2020-09-20 13:35:28 +0200
  • 64d696935e rescale images, correct discussion a.ott 2020-09-18 22:01:21 +0200
  • fe34966e6a discussion a.ott 2020-09-17 22:34:22 +0200
  • dc6adfbd1c start of discussion a.ott 2020-09-17 12:11:52 +0200
  • b4e1a8663e figuresgit push origin master ! and fiigure descriptions of results a.ott 2020-09-16 22:36:47 +0200
  • 63d1547f97 fit final dataset again (3) add skipping already fitted ones alexanderott 2020-09-13 18:49:59 +0200
  • d0cfd795d1 remove tau test from abstract model alexanderott 2020-09-13 09:54:13 +0200
  • 41fb56d616 fit without ref period and dend tau alexanderott 2020-09-13 08:29:25 +0200
  • 5cb0ee435e fit no dend_tau increased v_offset baseline sim 6 alexanderott 2020-09-12 20:18:40 +0200
  • 52e6fea5f8 fit no dend_tau increased v_offset baseline sim to 9 from 5 alexanderott 2020-09-12 19:27:55 +0200
  • f1268b291c fit without ref period a.ott 2020-09-12 14:35:17 +0200
  • f8a8e87f04 remove non significant colors from plots, add filtering of fits for cv a.ott 2020-09-11 17:55:44 +0200
  • f5141a0760 fiddle with figures a.ott 2020-09-11 17:22:39 +0200
  • 3c06be9917 test labrotation freq phenomenon a.ott 2020-09-11 17:22:18 +0200
  • 5af4117d4c add option to fit without dendTau or ref_period a.ott 2020-09-11 17:21:47 +0200
  • 4c0bde5833 add convolve freq calculation a.ott 2020-09-11 17:20:50 +0200
  • 3577b86cbb result images a.ott 2020-09-10 17:24:28 +0200
  • 6ac778e84a introduction base of population coding alexanderott 2020-09-09 23:32:55 +0200
  • 4a4703894c introduction update figures a.ott 2020-09-09 18:52:01 +0200
  • 9ed748e479 continue introduction alexanderott 2020-09-08 23:28:14 +0200
  • 72b61cc5f7 update weights, and to new fits final_2 a.ott 2020-09-08 18:32:07 +0200
  • 7914d00978 consolidate f_zero curve weighting include 0 when rejecting invalid parameter values a.ott 2020-09-08 18:30:57 +0200
  • da3295fba7 update to new fits a.ott 2020-09-08 18:28:06 +0200
  • d15f48b174 add warning print a.ott 2020-09-08 18:27:39 +0200
  • fde58b319d test plottools a.ott 2020-09-08 18:27:09 +0200
  • 69de5ecf59 add plottools option of labeling figures update colors a.ott 2020-09-08 18:26:24 +0200
  • aacdac9aad save more info for lab rotation a.ott 2020-09-08 18:25:51 +0200
  • 24e91a5601 continue intro a.ott 2020-09-08 18:25:09 +0200
  • b887b23c9f update thesis figures a.ott 2020-09-08 18:24:06 +0200
  • 840a83ac15 correct mat&met 1 a.ott 2020-09-05 16:45:38 +0200
  • 944cdd6b6f remove unneded latex files a.ott 2020-09-05 11:27:59 +0200
  • ad1ddbb041 update stimulus development figur + fix Bug in sinusoidalStepStim class a.ott 2020-09-05 11:25:05 +0200
  • 6f83f3b171 remove unneeded sentence a.ott 2020-09-04 17:56:45 +0200
  • ad016b169b a lot a.ott 2020-09-04 17:54:29 +0200
  • be35a13226 first proofread of mat&met v1 a.ott 2020-09-01 15:12:56 +0200
  • b3297fd963 v1 mat met finished alexanderott 2020-08-31 19:20:47 +0200
  • 0bc3324fb4 write mat&met, improve images a.ott 2020-08-28 17:40:47 +0200
  • 659c71673a matmet update, analysis fig a.ott 2020-08-25 11:25:03 +0200
  • 96e9d744bb metadata analysis and fi_curve testing a.ott 2020-08-22 15:53:00 +0200
  • cb74838326 state final 1 fitting a.ott 2020-08-22 11:29:26 +0200
  • 2431842caa improved figures a.ott 2020-08-22 11:29:03 +0200
  • b3f5016326 mat met in works a.ott 2020-08-22 11:28:47 +0200
  • 5ef0594dd4 use fitting error to choose best fit a.ott 2020-08-19 17:18:16 +0200
  • 5f5afd68a9 test sorting out 'bad' fits a.ott 2020-08-19 17:17:32 +0200
  • 68e7b75768 better figures a.ott 2020-08-19 17:16:57 +0200
  • a8ce30d92b changes in notes thesis a.ott 2020-08-19 17:16:13 +0200
  • 45aa212b8a many changes a.ott 2020-08-15 17:16:39 +0200
  • f176a7db4f move read papers add notes file a.ott 2020-08-08 15:44:42 +0200
  • 463fcb5997 improve starting parameters and weighting a.ott 2020-08-08 15:44:16 +0200
  • 5f2597381c formatting changes in used directories a.ott 2020-08-01 12:06:39 +0200
  • eeb43fd7fc add error of mean-square with the isi bins a.ott 2020-08-01 12:05:50 +0200
  • e9c414dab5 make some options global a.ott 2020-08-01 12:04:53 +0200
  • d8911da92f add function to recalculate saved values a.ott 2020-08-01 12:04:10 +0200
  • f973882e62 mirror mirrored cells for plot a.ott 2020-08-01 12:03:08 +0200
  • b1be741042 add option to recalculate saved values a.ott 2020-08-01 12:02:06 +0200
  • c5b72bec26 code clean up a.ott 2020-07-28 10:54:02 +0200
  • 90ccb4459d change start parameters, clean up old code a.ott 2020-07-28 09:35:29 +0200
  • 05c808e90b fit bursties and tests a.ott 2020-07-28 09:34:35 +0200
  • d100524e84 print medians of percent errors a.ott 2020-07-28 09:34:05 +0200
  • 2f76cefd3c correct spiketimes if timestart != 0 a.ott 2020-07-28 09:32:57 +0200
  • 3d8dea561e correct error plot a.ott 2020-07-28 09:32:03 +0200
  • d265449d75 recalculate the baseline variables a.ott 2020-07-28 09:31:19 +0200
  • 51d8f72c06 add f_0_curve error image to master plot a.ott 2020-07-28 09:30:38 +0200
  • 3803628749 correct f_zero_curve error a.ott 2020-07-28 09:28:58 +0200
  • 5fda783dfd mergin master a.ott 2020-07-23 10:50:23 +0200
  • d395e0b15f change normal run to single threaded for tests a.ott 2020-07-23 10:36:23 +0200
  • 2e6a4af7fd adapt for ModelFit a.ott 2020-07-23 10:35:06 +0200
  • 6992698323 add read of sampling rates a.ott 2020-07-23 10:34:04 +0200
  • 4b406f033a finish sensitivity analysis a.ott 2020-07-23 10:33:01 +0200
  • 16a8da2dfc correct th mean square error for not equal sampling rates a.ott 2020-07-23 10:32:31 +0200
  • ab8948ec41 save and plot all error values that occured during fitting, delete unused fit routines alexanderott 2020-07-22 18:07:00 +0200
  • 302aee34d6 add Function to plot histograms of error values alexanderott 2020-07-22 18:06:12 +0200
  • 365c6ae825 add f zero freq curve error a.ott 2020-07-17 13:39:02 +0200