Alexander/P-unit_model
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fit without ref period and dend tau

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alexanderott 2020-09-13 08:29:25 +02:00
parent 5cb0ee435e
commit 41fb56d616
1 changed files with 4 additions and 4 deletions
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8
run_Fitter.py
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@ -14,8 +14,8 @@ from helperFunctions import plot_errors
import multiprocessing as mp
SAVE_DIRECTORY = "./results/ref_and_tau/no_dend_tau/"
SAVE_DIRECTORY_BEST = "./results/ref_and_tau/ndt_best"
SAVE_DIRECTORY = "./results/ref_and_tau/with_out_both/"
SAVE_DIRECTORY_BEST = "./results/ref_and_tau/wob_best/"
# [vs, sc, cv, isi_hist, bursty, f_inf, f_inf_slope, f_zero, f_zero_slope, f0_curve]
ERROR_WEIGHTS = (1, 1, 1, 1, 1, 1, 1, 1, 0, 1)
@ -45,7 +45,7 @@ def test_single_cell(path):
for i, p in enumerate(start_parameters):
fitter = Fitter()
fitter.set_data_reference_values(cell_data)
fmin, res_par = fitter.fit_routine_no_dend_tau(p, ERROR_WEIGHTS)
fmin, res_par = fitter.fit_routine_no_dend_tau_and_no_ref_period(p, ERROR_WEIGHTS)
cell_path = os.path.split(cell_data.get_data_path())[-1]
@ -60,7 +60,7 @@ def fit_cell_base(parameters):
time1 = time.time()
fitter = Fitter()
fitter.set_data_reference_values(parameters[0])
fmin, res_par = fitter.fit_routine_no_dend_tau(parameters[2], ERROR_WEIGHTS)
fmin, res_par = fitter.fit_routine_no_dend_tau_and_no_ref_period(parameters[2], ERROR_WEIGHTS)
cell_data = parameters[0]
cell_name = os.path.split(cell_data.get_data_path())[-1]