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c967a4e5a9
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save plot
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2023-01-24 08:14:31 +01:00 |
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weygoldt
|
87d66dfc2f
|
searchf works and debug mode
|
2023-01-23 20:27:16 +01:00 |
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b44a346097
|
Merge branch 'master' into eventtriggeredchirps
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2023-01-23 18:06:58 +01:00 |
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782fb60e7a
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something weird
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2023-01-23 18:03:01 +01:00 |
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1bdb7e721a
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winner vs loser plot, winner physical strange
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2023-01-23 17:49:07 +01:00 |
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weygoldt
|
6159121d76
|
Merge branch 'master' of https://whale.am28.uni-tuebingen.de/git/raab/GP2023_chirp_detection
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2023-01-23 16:09:43 +01:00 |
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weygoldt
|
a3ddd49040
|
all broken
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2023-01-23 16:09:16 +01:00 |
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e7b9d239d2
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implemented bootstrapping, q5 of physical still weird
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2023-01-23 15:58:22 +01:00 |
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c6facd6f0c
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adding mask for bodylength
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2023-01-23 14:51:36 +01:00 |
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9bfbe8df5e
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Merge branch 'master' into plot_event_timeline
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2023-01-23 13:53:40 +01:00 |
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9fcdcfe019
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adding coment of spectogramm
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2023-01-23 13:52:22 +01:00 |
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7fd98743b0
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all event triggered chirps + chirprate with gaussian kernel
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2023-01-23 13:48:40 +01:00 |
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d754013aba
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finishing event_time
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2023-01-23 12:04:33 +01:00 |
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b4bc49e366
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start implementing gammakernel
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2023-01-23 10:01:24 +01:00 |
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e19ddcb391
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merge master
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2023-01-23 09:58:48 +01:00 |
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c5b9d648e8
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new plotfile for CTC and PTC
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2023-01-23 09:49:19 +01:00 |
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weygoldt
|
369f26123a
|
Merge branch 'master' of https://whale.am28.uni-tuebingen.de/git/raab/GP2023_chirp_detection
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2023-01-23 09:47:19 +01:00 |
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weygoldt
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13b63f4670
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added kde functions
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2023-01-23 09:47:15 +01:00 |
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b755fe8bf3
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Merge branch 'master' into plot_event_timeline
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2023-01-23 09:45:48 +01:00 |
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db3157ff73
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Merge branch 'master' into behaviour
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2023-01-23 09:41:37 +01:00 |
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039a027108
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adding plots
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2023-01-23 09:33:47 +01:00 |
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c6340e5a4d
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Fish loop needs debugging
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2023-01-22 21:19:14 +01:00 |
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weygoldt
|
cc96501f5e
|
even better bufferplot
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2023-01-22 19:29:00 +01:00 |
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weygoldt
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943de7c023
|
inroplot in intro
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2023-01-22 16:22:32 +01:00 |
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weygoldt
|
fa6456bae4
|
inroplot finished
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2023-01-22 15:59:27 +01:00 |
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weygoldt
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e838185d8a
|
gapfinder should work now, need data for testing
|
2023-01-22 12:23:35 +01:00 |
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16e6003958
|
adding logger for csv file readout
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2023-01-22 11:29:23 +01:00 |
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weygoldt
|
9a7ac66f4a
|
plot looks better now
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2023-01-22 00:52:22 +01:00 |
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333bb045a6
|
wrong folder
|
2023-01-21 21:32:40 +01:00 |
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da3d7b83a4
|
removing, wrong branch
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2023-01-21 21:31:41 +01:00 |
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cd3cbf8856
|
adding unfinshed timeline plot
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2023-01-21 21:29:58 +01:00 |
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b2a4d80d17
|
setup
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2023-01-21 17:36:05 +01:00 |
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d425b8dafa
|
adding plot with chirps in chasing
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2023-01-21 10:03:57 +01:00 |
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weygoldt
|
2dec8fd508
|
reformatted
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2023-01-20 17:54:51 +01:00 |
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weygoldt
|
16751a7006
|
changed wrong variable names
|
2023-01-20 17:46:22 +01:00 |
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weygoldt
|
9f46b969a5
|
added gridspec plot layout
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2023-01-20 17:09:48 +01:00 |
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7a86d53574
|
Merge branch 'master' into behaviour
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2023-01-20 13:59:33 +01:00 |
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weygoldt
|
ddf7bd545a
|
refactoring finished for now
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2023-01-20 13:56:26 +01:00 |
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2da26f9702
|
started trying the chirps in chasing part
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2023-01-20 13:41:08 +01:00 |
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4a29cdf84d
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Merge branch 'master' into behaviour
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2023-01-20 11:40:50 +01:00 |
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f89225c66a
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Check for wrong double events
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2023-01-20 11:40:21 +01:00 |
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weygoldt
|
9985686d53
|
new variable names
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2023-01-19 18:21:59 +01:00 |
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7bf39da31c
|
added To Dos
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2023-01-19 17:30:04 +01:00 |
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9bc13294d8
|
sort chirps and chirp ids in time
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2023-01-19 16:14:00 +01:00 |
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8d790ad89c
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adding behaviour plot
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2023-01-19 15:56:42 +01:00 |
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90c6a15433
|
tryingen to get behaviour data
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2023-01-19 15:13:30 +01:00 |
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weygoldt
|
e972d6e8bc
|
added saving arrays
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2023-01-19 13:49:23 +01:00 |
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weygoldt
|
c2de6c7060
|
plot works
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2023-01-19 13:47:18 +01:00 |
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ef0c92bb61
|
changing plotstyle
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2023-01-19 10:52:02 +01:00 |
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7eb81eb99d
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Merge branch 'master' into behaviour
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2023-01-18 18:02:37 +01:00 |
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da153f36e9
|
adding comments
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2023-01-18 18:02:12 +01:00 |
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a79fc86ab9
|
removing logger output and adding tqdm
|
2023-01-18 17:58:33 +01:00 |
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weygoldt
|
501172f30d
|
plot works
|
2023-01-18 17:02:57 +01:00 |
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weygoldt
|
9422af9fb0
|
purge duplicates
|
2023-01-18 12:42:41 +01:00 |
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ba3803bb56
|
patrick übernimmt
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2023-01-18 11:43:11 +01:00 |
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76b8042619
|
Merge branch 'peakdetection' of https://whale.am28.uni-tuebingen.de/git/raab/GP2023_chirp_detection into peakdetection
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2023-01-18 11:25:16 +01:00 |
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weygoldt
|
06c1878947
|
added whitspace to make prettier
|
2023-01-18 11:24:44 +01:00 |
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1cdf813b6d
|
adding final plot to script
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2023-01-18 11:23:47 +01:00 |
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weygoldt
|
741349514a
|
resolved merge conflict
|
2023-01-18 11:17:35 +01:00 |
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weygoldt
|
5dc98d6163
|
chatgpt alternative functions tested
|
2023-01-18 11:13:24 +01:00 |
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weygoldt
|
22608627e0
|
chatgpt alternative functions tested
|
2023-01-18 11:08:43 +01:00 |
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ef61cec695
|
adding plot with multiple windows
|
2023-01-18 11:04:58 +01:00 |
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ad888734dd
|
saved chirps
|
2023-01-18 10:25:48 +01:00 |
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844f65e24e
|
final peak version with bool
|
2023-01-18 09:38:23 +01:00 |
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7034e9421b
|
Merge branch 'peakdetection' of https://whale.am28.uni-tuebingen.de/git/raab/GP2023_chirp_detection into peakdetection
|
2023-01-18 09:17:40 +01:00 |
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00d6fed161
|
adding with ittertools the combinations
|
2023-01-18 09:16:34 +01:00 |
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weygoldt
|
d3bcef5b79
|
added chatgpt solution
|
2023-01-18 09:14:33 +01:00 |
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0a9e1b1fb2
|
adding shifts in behaviour data
|
2023-01-17 21:29:46 +01:00 |
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363f2dd14c
|
adding boolien vector to reduce duplicates
|
2023-01-17 20:19:26 +01:00 |
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8138e3107f
|
adding boolien to peak detection
|
2023-01-17 19:00:13 +01:00 |
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2ac769da9b
|
adding best electrode to peak detection
|
2023-01-17 14:33:28 +01:00 |
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c42c1f3ce5
|
finishing the peakdetection algorythm
|
2023-01-17 14:29:23 +01:00 |
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weygoldt
|
8d11e5ff7a
|
ugly
|
2023-01-17 12:15:03 +01:00 |
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ff8c270c3f
|
key problems
|
2023-01-17 10:08:21 +01:00 |
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d2eb169490
|
adding peak lists
|
2023-01-17 09:54:40 +01:00 |
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weygoldt
|
fded125f5d
|
new data structure
|
2023-01-17 09:42:25 +01:00 |
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0ade3b101a
|
plotting true zeros
|
2023-01-17 09:07:50 +01:00 |
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3c5ab4381e
|
Merge branch 'master' into chirp_simulation
|
2023-01-16 20:10:12 +01:00 |
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990e858d02
|
checking the instantaneos_frequency
|
2023-01-16 20:07:38 +01:00 |
|
weygoldt
|
b41e03c681
|
cleaned up a bit
|
2023-01-16 19:31:13 +01:00 |
|
weygoldt
|
12d1c3c1af
|
export data to subsubsublists
|
2023-01-16 18:53:45 +01:00 |
|
weygoldt
|
812122f4f8
|
added saving arrays
|
2023-01-16 17:22:16 +01:00 |
|
weygoldt
|
dec57f9b9b
|
dynamic frequency works
|
2023-01-16 16:36:44 +01:00 |
|
weygoldt
|
4b8658fdde
|
gapfinder works
|
2023-01-16 16:06:22 +01:00 |
|
weygoldt
|
e1fdb13787
|
gapfinder works
|
2023-01-16 16:00:18 +01:00 |
|
|
|
9896926a3e
|
adding frequencys from all fish
|
2023-01-16 13:40:30 +01:00 |
|
weygoldt
|
adfb6dded8
|
Merge branch 'normalize'
|
2023-01-16 11:15:27 +01:00 |
|
weygoldt
|
06eefa169e
|
normalization works
|
2023-01-16 11:13:40 +01:00 |
|
|
|
b2c94fbb79
|
adding tills code
|
2023-01-16 10:47:34 +01:00 |
|
weygoldt
|
a825e3dee4
|
changed conf
|
2023-01-16 09:49:41 +01:00 |
|
weygoldt
|
0f1fca8b18
|
added unfiltered envelope in main plot
|
2023-01-16 09:49:41 +01:00 |
|
weygoldt
|
658b5011fd
|
added plotstyle and poster template
|
2023-01-16 09:49:41 +01:00 |
|
weygoldt
|
5c48efb2e9
|
changed to class
|
2023-01-16 09:49:41 +01:00 |
|
|
|
98d98818cb
|
adding attributes from the pandas datafram to clas
|
2023-01-15 16:39:32 +01:00 |
|
|
|
133aff26a1
|
adding thunderfish chirp simulation
|
2023-01-15 16:12:45 +01:00 |
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|
|
83dbd2feed
|
adding question how many windows to be displayed
|
2023-01-15 15:11:05 +01:00 |
|
|
|
3ee30f96f0
|
Merge pull request 'added real overlap' (#3) from patrick into master
Reviewed-on: #3
|
2023-01-13 16:06:27 +01:00 |
|
|
|
41b75f1a68
|
Merge branch 'master' into alex
|
2023-01-13 16:04:13 +01:00 |
|
weygoldt
|
3a103a24a8
|
added real overlap
|
2023-01-13 15:59:16 +01:00 |
|
weygoldt
|
feb48211fc
|
started new overlap
|
2023-01-13 15:37:52 +01:00 |
|
|
|
6cc1dc7708
|
Merge branch 'master' into alex
|
2023-01-13 15:07:24 +01:00 |
|
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|
8a83800242
|
adding comments to the pull request
|
2023-01-13 15:07:10 +01:00 |
|
|
|
c7934680f9
|
removing embed
|
2023-01-13 14:03:04 +01:00 |
|
weygoldt
|
23e028ce43
|
added config file
|
2023-01-13 14:02:40 +01:00 |
|
|
|
5ccf6b8d79
|
adding clases for behavioral readout
|
2023-01-13 13:59:36 +01:00 |
|
|
|
6fb5dd560a
|
adjusted blank space
|
2023-01-13 11:06:17 +01:00 |
|
|
|
73c9269b76
|
added xlabel
|
2023-01-13 10:58:09 +01:00 |
|
weygoldt
|
ee6bf94139
|
sorted plots
|
2023-01-13 10:38:56 +01:00 |
|
|
|
02b204c7d4
|
adding comments
|
2023-01-12 18:22:32 +01:00 |
|
weygoldt
|
96933c0532
|
sorted plots
|
2023-01-12 17:52:19 +01:00 |
|
weygoldt
|
41ffe7ecce
|
Merge branch 'master' of https://whale.am28.uni-tuebingen.de/git/raab/GP2023_chirp_detection
|
2023-01-12 14:41:51 +01:00 |
|
weygoldt
|
5a8643d8a0
|
saved file changed something
|
2023-01-12 14:41:26 +01:00 |
|
|
|
1077558868
|
Merge branch 'master' of https://whale.am28.uni-tuebingen.de/git/raab/GP2023_chirp_detection
|
2023-01-12 14:39:14 +01:00 |
|
|
|
a8f6c69fef
|
prominance in peak detection
|
2023-01-12 14:35:55 +01:00 |
|
weygoldt
|
9821aea62e
|
implemented rolling window
|
2023-01-12 14:33:46 +01:00 |
|
weygoldt
|
3af4426a26
|
added more docstrings and moved chirpsim
|
2023-01-12 09:04:51 +01:00 |
|
weygoldt
|
ce1c0fa319
|
added more docstrings and moved chirpsim
|
2023-01-12 08:50:28 +01:00 |
|
weygoldt
|
21ff35c6ac
|
added docstrings
|
2023-01-11 22:38:11 +01:00 |
|
weygoldt
|
e174979e9c
|
reformatted
|
2023-01-11 17:15:21 +01:00 |
|
|
|
9c2b4d0634
|
adding peak detection
|
2023-01-11 15:49:42 +01:00 |
|
|
|
98dee7a6ae
|
adding simulated chirps
|
2023-01-11 15:49:07 +01:00 |
|
weygoldt
|
3db4b1dfe1
|
Merge branch 'master' of https://whale.am28.uni-tuebingen.de/git/raab/GP2023_chirp_detection
|
2023-01-11 14:14:52 +01:00 |
|
|
|
440bb78afc
|
refactor analysis
|
2023-01-11 14:11:46 +01:00 |
|
weygoldt
|
ba116aaffe
|
switched chirpdetection
|
2023-01-11 14:11:38 +01:00 |
|
|
|
ed3791bc0d
|
adding first script
|
2023-01-11 13:58:25 +01:00 |
|
|
|
eb957d0be9
|
adding filtes and gitignore
|
2023-01-11 13:54:07 +01:00 |
|
|
|
77ff6aa8d1
|
adding chirpdetection
|
2023-01-11 13:47:02 +01:00 |
|
