Commit Graph

134 Commits

Author SHA1 Message Date
8b93d92f4d Merge pull request 'more fixes for old datasets' (#5) from relacs into master
Reviewed-on: jgrewe/fishBook#5
2020-08-14 17:26:50 +02:00
6e2bfde2dc [database] fix repro run counter ...
sometimes repros do not  put out stimuli for whatever reason.
They are noted in the stimuli.dat but not e.g. in the stimspikes.dat.
This leads to conflicts when fetching the data...
2020-08-14 17:19:02 +02:00
34f0044749 [backend/util] fixing time conversions 2020-08-14 17:17:13 +02:00
e95dd763a4 Merge pull request 'several fixes and improvements for handling old relacs files' (#4) from relacs into master
Reviewed-on: jgrewe/fishBook#4
2020-08-14 17:04:41 +02:00
0da2bfa110 [frontend util] fix trial duration estimation 2020-08-14 13:39:07 +02:00
94221463f2 [backend/util] fix parsing old stimfiles ...
we need to ignore init lines, there is no actual stimulus put out
2020-08-14 13:34:07 +02:00
3d70e31512 [relacs] ignore trials with less than 5 spikes ...
fix run and trial duration info
2020-08-13 15:54:46 +02:00
0881947fd2 [util] Stimspikes stored trial duration and data 2020-08-13 15:53:56 +02:00
8844825c21 [frontend] dataset by id works form parts of id 2020-08-13 15:53:08 +02:00
1cf7530b48 [backend] reconstruct repro run, if not in stimuli.dat 2020-08-13 15:52:19 +02:00
e37d4d5add [frontend] add __repr__ and to dict methods 2020-08-12 18:24:58 +02:00
48acf9edb3 [FileStimData] add settings to classmembers 2020-08-12 18:24:34 +02:00
31bb53fe31 [Dataset] add construtor arg to pull up from dataset_id 2020-08-12 13:44:56 +02:00
7457340dfe [relacs/BaselineData] add baseline rate 2020-08-12 13:43:59 +02:00
29f971b892 [fixes] in docu and frontend 2020-08-10 17:03:07 +02:00
6e26991a85 Merge branch 'master' of https://whale.am28.uni-tuebingen.de/git/jgrewe/fishBook 2020-08-10 13:07:21 +02:00
d4db46bedf [server] and background stuff 2020-08-10 13:06:55 +02:00
24ccadca1d [mkdocs] simplify nav 2020-08-08 13:35:08 +02:00
72fe7e2df8 [setup] improvements 2020-08-08 13:05:18 +02:00
b48b2b1a92 tiny fixes 2020-08-08 12:42:02 +02:00
589286fad1 [server] add server stub and command line clients 2020-08-07 18:48:47 +02:00
3a09e301c0 [dataserver/cmd] add first steps towards a data server 2020-08-07 11:17:52 +02:00
38b73303c0 [frontend] FileStimulus is working for relacsed and nixed files 2020-08-06 19:41:05 +02:00
07b60c6622 [frontend] import filestim data from nix rund, add serveral methods 2020-08-05 19:19:24 +02:00
32f4f23527 [docs] more more more 2020-08-04 14:35:28 +02:00
472f771cb5 [docs] database layout.md 2020-08-03 18:31:27 +02:00
5a4644344a Merge branch 'master' of https://whale.am28.uni-tuebingen.de/git/jgrewe/fishBook 2020-08-03 18:26:50 +02:00
ec88c79e0f [frontend] support date restrictions in dataset, expose data_host to
user
2020-08-03 18:26:07 +02:00
b376edb342 [docs] more docs and getting started 2020-08-03 18:25:47 +02:00
333db5c8f9 [relacs] adaptations of find methods 2020-08-03 18:21:36 +02:00
56b2622383 [docs] add ER schema 2020-08-03 18:20:18 +02:00
05da4e0a89 [cmd] add project initialize script 2020-07-31 23:16:27 +02:00
9d61ca7a1c [backend] a few improvements, user feedback during import 2020-07-31 18:05:24 +02:00
b43aabba6f [frontend] a lot of docstrings 2020-07-31 18:04:40 +02:00
24350c18ac [cmd] profiling 2020-07-31 18:03:09 +02:00
dd8bff586d [util] split mtag feature to yaml routine 2020-07-31 18:02:31 +02:00
67c0b06052 [docs] info on db server configurations 2020-07-31 18:01:59 +02:00
fcb4a48500 [setup.py] inbetween state 2020-07-31 18:01:05 +02:00
548dca769e [cmd] add a data import command 2020-07-31 17:59:50 +02:00
e8a37a326c some edits 2020-07-29 11:51:44 +02:00
d968fdac8c [frontend] add test flag to find methods 2020-07-28 15:33:01 +02:00
1832bae72c backend better output 2020-07-28 15:31:36 +02:00
f4d669f1d6 [dataimport] minor optimizations 2020-07-28 15:30:37 +02:00
4326148b3f fix output 2020-07-28 14:29:57 +02:00
b01270bb9b data import command line tool 2020-07-28 14:29:40 +02:00
fce7f67fa2 [frontend] improve finding, docstrings 2020-07-28 13:36:10 +02:00
76107b3074 [backend/database] fix imports, remove single quotes from settings 2020-07-28 13:34:59 +02:00
885d952e43 [gitignore] add vscode, generated docu folder 2020-07-28 13:34:05 +02:00
fec628034c [backend/util] progress bar, some docstrings 2020-07-28 13:33:29 +02:00
5ba629c1ae [frontend] dataset docstrings, improved searching 2020-07-28 13:32:17 +02:00