Commit Graph

210 Commits

Author SHA1 Message Date
weygoldt
13b63f4670 added kde functions 2023-01-23 09:47:15 +01:00
b755fe8bf3 Merge branch 'master' into plot_event_timeline 2023-01-23 09:45:48 +01:00
db3157ff73 Merge branch 'master' into behaviour 2023-01-23 09:41:37 +01:00
039a027108 adding plots 2023-01-23 09:33:47 +01:00
c6340e5a4d Fish loop needs debugging 2023-01-22 21:19:14 +01:00
weygoldt
cc96501f5e even better bufferplot 2023-01-22 19:29:00 +01:00
weygoldt
943de7c023 inroplot in intro 2023-01-22 16:22:32 +01:00
weygoldt
fa6456bae4 inroplot finished 2023-01-22 15:59:27 +01:00
weygoldt
e838185d8a gapfinder should work now, need data for testing 2023-01-22 12:23:35 +01:00
16e6003958 adding logger for csv file readout 2023-01-22 11:29:23 +01:00
weygoldt
9a7ac66f4a plot looks better now 2023-01-22 00:52:22 +01:00
333bb045a6 wrong folder 2023-01-21 21:32:40 +01:00
da3d7b83a4 removing, wrong branch 2023-01-21 21:31:41 +01:00
cd3cbf8856 adding unfinshed timeline plot 2023-01-21 21:29:58 +01:00
b2a4d80d17 setup 2023-01-21 17:36:05 +01:00
d425b8dafa adding plot with chirps in chasing 2023-01-21 10:03:57 +01:00
weygoldt
2dec8fd508 reformatted 2023-01-20 17:54:51 +01:00
weygoldt
16751a7006 changed wrong variable names 2023-01-20 17:46:22 +01:00
weygoldt
9f46b969a5 added gridspec plot layout 2023-01-20 17:09:48 +01:00
7a86d53574 Merge branch 'master' into behaviour 2023-01-20 13:59:33 +01:00
weygoldt
ddf7bd545a refactoring finished for now 2023-01-20 13:56:26 +01:00
2da26f9702 started trying the chirps in chasing part 2023-01-20 13:41:08 +01:00
4a29cdf84d Merge branch 'master' into behaviour 2023-01-20 11:40:50 +01:00
f89225c66a Check for wrong double events 2023-01-20 11:40:21 +01:00
weygoldt
9985686d53 new variable names 2023-01-19 18:21:59 +01:00
7bf39da31c added To Dos 2023-01-19 17:30:04 +01:00
9bc13294d8 sort chirps and chirp ids in time 2023-01-19 16:14:00 +01:00
8d790ad89c adding behaviour plot 2023-01-19 15:56:42 +01:00
90c6a15433 tryingen to get behaviour data 2023-01-19 15:13:30 +01:00
weygoldt
e972d6e8bc added saving arrays 2023-01-19 13:49:23 +01:00
weygoldt
c2de6c7060 plot works 2023-01-19 13:47:18 +01:00
ef0c92bb61 changing plotstyle 2023-01-19 10:52:02 +01:00
7eb81eb99d Merge branch 'master' into behaviour 2023-01-18 18:02:37 +01:00
da153f36e9 adding comments 2023-01-18 18:02:12 +01:00
a79fc86ab9 removing logger output and adding tqdm 2023-01-18 17:58:33 +01:00
weygoldt
501172f30d plot works 2023-01-18 17:02:57 +01:00
weygoldt
9422af9fb0 purge duplicates 2023-01-18 12:42:41 +01:00
ba3803bb56 patrick übernimmt 2023-01-18 11:43:11 +01:00
76b8042619 Merge branch 'peakdetection' of https://whale.am28.uni-tuebingen.de/git/raab/GP2023_chirp_detection into peakdetection 2023-01-18 11:25:16 +01:00
weygoldt
06c1878947 added whitspace to make prettier 2023-01-18 11:24:44 +01:00
1cdf813b6d adding final plot to script 2023-01-18 11:23:47 +01:00
weygoldt
741349514a resolved merge conflict 2023-01-18 11:17:35 +01:00
weygoldt
5dc98d6163 chatgpt alternative functions tested 2023-01-18 11:13:24 +01:00
weygoldt
22608627e0 chatgpt alternative functions tested 2023-01-18 11:08:43 +01:00
ef61cec695 adding plot with multiple windows 2023-01-18 11:04:58 +01:00
ad888734dd saved chirps 2023-01-18 10:25:48 +01:00
844f65e24e final peak version with bool 2023-01-18 09:38:23 +01:00
7034e9421b Merge branch 'peakdetection' of https://whale.am28.uni-tuebingen.de/git/raab/GP2023_chirp_detection into peakdetection 2023-01-18 09:17:40 +01:00
00d6fed161 adding with ittertools the combinations 2023-01-18 09:16:34 +01:00
weygoldt
d3bcef5b79 added chatgpt solution 2023-01-18 09:14:33 +01:00
0a9e1b1fb2 adding shifts in behaviour data 2023-01-17 21:29:46 +01:00
363f2dd14c adding boolien vector to reduce duplicates 2023-01-17 20:19:26 +01:00
8138e3107f adding boolien to peak detection 2023-01-17 19:00:13 +01:00
2ac769da9b adding best electrode to peak detection 2023-01-17 14:33:28 +01:00
c42c1f3ce5 finishing the peakdetection algorythm 2023-01-17 14:29:23 +01:00
weygoldt
8d11e5ff7a ugly 2023-01-17 12:15:03 +01:00
ff8c270c3f key problems 2023-01-17 10:08:21 +01:00
d2eb169490 adding peak lists 2023-01-17 09:54:40 +01:00
weygoldt
fded125f5d new data structure 2023-01-17 09:42:25 +01:00
0ade3b101a plotting true zeros 2023-01-17 09:07:50 +01:00
3c5ab4381e Merge branch 'master' into chirp_simulation 2023-01-16 20:10:12 +01:00
990e858d02 checking the instantaneos_frequency 2023-01-16 20:07:38 +01:00
weygoldt
b41e03c681 cleaned up a bit 2023-01-16 19:31:13 +01:00
weygoldt
12d1c3c1af export data to subsubsublists 2023-01-16 18:53:45 +01:00
weygoldt
812122f4f8 added saving arrays 2023-01-16 17:22:16 +01:00
weygoldt
dec57f9b9b dynamic frequency works 2023-01-16 16:36:44 +01:00
weygoldt
4b8658fdde gapfinder works 2023-01-16 16:06:22 +01:00
weygoldt
e1fdb13787 gapfinder works 2023-01-16 16:00:18 +01:00
9896926a3e adding frequencys from all fish 2023-01-16 13:40:30 +01:00
weygoldt
adfb6dded8 Merge branch 'normalize' 2023-01-16 11:15:27 +01:00
weygoldt
06eefa169e normalization works 2023-01-16 11:13:40 +01:00
b2c94fbb79 adding tills code 2023-01-16 10:47:34 +01:00
weygoldt
a825e3dee4 changed conf 2023-01-16 09:49:41 +01:00
weygoldt
0f1fca8b18 added unfiltered envelope in main plot 2023-01-16 09:49:41 +01:00
weygoldt
658b5011fd added plotstyle and poster template 2023-01-16 09:49:41 +01:00
weygoldt
5c48efb2e9 changed to class 2023-01-16 09:49:41 +01:00
98d98818cb adding attributes from the pandas datafram to clas 2023-01-15 16:39:32 +01:00
133aff26a1 adding thunderfish chirp simulation 2023-01-15 16:12:45 +01:00
83dbd2feed adding question how many windows to be displayed 2023-01-15 15:11:05 +01:00
3ee30f96f0 Merge pull request 'added real overlap' (#3) from patrick into master
Reviewed-on: #3
2023-01-13 16:06:27 +01:00
41b75f1a68 Merge branch 'master' into alex 2023-01-13 16:04:13 +01:00
weygoldt
3a103a24a8 added real overlap 2023-01-13 15:59:16 +01:00
weygoldt
feb48211fc started new overlap 2023-01-13 15:37:52 +01:00
6cc1dc7708 Merge branch 'master' into alex 2023-01-13 15:07:24 +01:00
8a83800242 adding comments to the pull request 2023-01-13 15:07:10 +01:00
c7934680f9 removing embed 2023-01-13 14:03:04 +01:00
weygoldt
23e028ce43 added config file 2023-01-13 14:02:40 +01:00
5ccf6b8d79 adding clases for behavioral readout 2023-01-13 13:59:36 +01:00
6fb5dd560a adjusted blank space 2023-01-13 11:06:17 +01:00
73c9269b76 added xlabel 2023-01-13 10:58:09 +01:00
weygoldt
ee6bf94139 sorted plots 2023-01-13 10:38:56 +01:00
02b204c7d4 adding comments 2023-01-12 18:22:32 +01:00
weygoldt
96933c0532 sorted plots 2023-01-12 17:52:19 +01:00
weygoldt
41ffe7ecce Merge branch 'master' of https://whale.am28.uni-tuebingen.de/git/raab/GP2023_chirp_detection 2023-01-12 14:41:51 +01:00
weygoldt
5a8643d8a0 saved file changed something 2023-01-12 14:41:26 +01:00
1077558868 Merge branch 'master' of https://whale.am28.uni-tuebingen.de/git/raab/GP2023_chirp_detection 2023-01-12 14:39:14 +01:00
a8f6c69fef prominance in peak detection 2023-01-12 14:35:55 +01:00
weygoldt
9821aea62e implemented rolling window 2023-01-12 14:33:46 +01:00
weygoldt
3af4426a26 added more docstrings and moved chirpsim 2023-01-12 09:04:51 +01:00
weygoldt
ce1c0fa319 added more docstrings and moved chirpsim 2023-01-12 08:50:28 +01:00
weygoldt
21ff35c6ac added docstrings 2023-01-11 22:38:11 +01:00
weygoldt
e174979e9c reformatted 2023-01-11 17:15:21 +01:00
9c2b4d0634 adding peak detection 2023-01-11 15:49:42 +01:00
98dee7a6ae adding simulated chirps 2023-01-11 15:49:07 +01:00
weygoldt
3db4b1dfe1 Merge branch 'master' of https://whale.am28.uni-tuebingen.de/git/raab/GP2023_chirp_detection 2023-01-11 14:14:52 +01:00
440bb78afc refactor analysis 2023-01-11 14:11:46 +01:00
weygoldt
ba116aaffe switched chirpdetection 2023-01-11 14:11:38 +01:00
ed3791bc0d adding first script 2023-01-11 13:58:25 +01:00
eb957d0be9 adding filtes and gitignore 2023-01-11 13:54:07 +01:00
77ff6aa8d1 adding chirpdetection 2023-01-11 13:47:02 +01:00