new poster template

code/extract_chirps.py

@@ -4,11 +4,13 @@ import numpy as np
 from chirpdetection import chirpdetection
 from IPython import embed
 
+# check rec ../data/mount_data/2020-03-25-10_00/ starting at 3175
+
 
 def main(datapaths):
 
     for path in datapaths:
-        chirpdetection(path, plot='show')
+        chirpdetection(path, plot='false')
 
 
 if __name__ == '__main__':

poster/main.tex

@@ -1,4 +1,4 @@
-\documentclass[25pt, a0paper, landscape, margin=0mm, innermargin=20mm,
+\documentclass[25pt, a0paper, portrait, margin=0mm, innermargin=20mm,
 blockverticalspace=2mm, colspace=20mm, subcolspace=0mm]{tikzposter} %Default values for poster format options.
 
 \input{packages}
@@ -7,113 +7,86 @@ blockverticalspace=2mm, colspace=20mm, subcolspace=0mm]{tikzposter} %Default val
 \begin{document}
 
 \renewcommand{\baselinestretch}{1}
-\title{\parbox{1900pt}{Pushing the limits of time-frequency uncertainty in the
+\title{\parbox{1500pt}{Poster}}
-detection of transient communication signals in weakly electric fish}}
+\author{Sina Prause, Alexander Wendt, and Patrick Weygoldt}
-\author{Sina Prause, Alexander Wendt, Patrick Weygoldt}
+\institute{Supervised by Till Raab \& Jan Benda, Neuroethology Lab, University of Tuebingen}
-\institute{Supervised by Till Raab \& Jan Benda, Neurothology Group,
-University of Tübingen}
 \usetitlestyle[]{sampletitle}
 \maketitle
 \renewcommand{\baselinestretch}{1.4}
 
 \begin{columns}
-\column{0.5}
+\column{0.4}
 \myblock[TranspBlock]{Introduction}{
-    \begin{minipage}[t]{0.55\linewidth}
     The time-frequency tradeoff makes reliable signal detecion and simultaneous
     sender identification of freely interacting individuals impossible.
     This profoundly limits our current understanding of chirps to experiments
     with single - or physically separated - individuals.
-    \end{minipage} \hfill
+    \vspace{0.6cm}
-    \begin{minipage}[t]{0.40\linewidth}
-    \vspace{-1.5cm}
     \begin{tikzfigure}[]
-        \label{tradeoff}
+        \label{griddrawing}
-        \includegraphics[width=\linewidth]{figs/introplot}
+        \includegraphics[width=0.5\linewidth]{example-image-a}
     \end{tikzfigure}
-    \end{minipage}
 }
 
-\myblock[TranspBlock]{A chirp detection algorithm}{
+\myblock[TranspBlock]{Chirp detection}{
     \begin{tikzfigure}[]
-            \label{modulations}
+        \label{fig:example_a}
-            \includegraphics[width=\linewidth]{figs/algorithm}
+        \includegraphics[width=0.5\linewidth]{example-image-a}
     \end{tikzfigure}
+    \vspace{0cm}
 }
 
-\column{0.5}
+\column{0.6}
-\myblock[TranspBlock]{Chirps and diadic competitions}{
+\myblock[TranspBlock]{Chirps during competition}{
-    \begin{minipage}[t]{0.7\linewidth}
     \begin{tikzfigure}[]
-        \label{modulations}
+        \label{fig:example_b}
-        \includegraphics[width=\linewidth]{figs/placeholder1}
+        \includegraphics[width=0.5\linewidth]{example-image-b}
     \end{tikzfigure}
-    \end{minipage} \hfill
+    \noindent
-    \begin{minipage}[t]{0.25\linewidth}
+}
-        \lipsum[3][1-3]
-    \end{minipage}
-
-    \begin{minipage}[t]{0.7\linewidth}
-    \begin{tikzfigure}[]
-        \label{modulations}
-        \includegraphics[width=\linewidth]{figs/placeholder1}
-    \end{tikzfigure}
-    \end{minipage} \hfill
-    \begin{minipage}[t]{0.25\linewidth}
-        \lipsum[3][1-3]
-    \end{minipage}
 
-    \begin{minipage}[t]{0.7\linewidth}
+\myblock[TranspBlock]{Interactions at modulations}{
+    \vspace{-1.2cm}
     \begin{tikzfigure}[]
-        \label{modulations}
+        \label{fig:example_c}
-        \includegraphics[width=\linewidth]{figs/placeholder1}
+        \includegraphics[width=0.5\linewidth]{example-image-c}
     \end{tikzfigure}
-    \end{minipage} \hfill
-    \begin{minipage}[t]{0.25\linewidth}
-        \lipsum[3][1-3]
-    \end{minipage}
-
 
+    \begin{multicols}{2}
+        \begin{itemize}
+            \setlength\itemsep{0.5em}
+            \item $\Delta$EOD$f$ does not appear to decrease during synchronous modulations ().
+            \item Individuals that rise their EOD$f$ first appear to rise their frequency higher compared to reactors (\textbf{B}).
+            \vfill
+            \null
+            \columnbreak
+            \item Synchronized fish keep distances below 1 m (\textbf{C}) but distances over 3 m also occur (see \textbf{movie}).
+            \item Spatial interactions increase \textbf{after} the start of a synchronous modulation (\textbf{D}).
+        \end{itemize}
+    \end{multicols}
+    \vspace{-1cm}
 }
 
 \myblock[TranspBlock]{Conclusion}{
-    \lipsum[3][1-9]
+    \begin{itemize}
-}
+        \setlength\itemsep{0.5em}
-
+        \item Our analysis is the first to indicate that \textit{A. leptorhynchus} uses long, diffuse and synchronized EOD$f$ signals to communicate in addition to chirps and rises.
-% \column{0.3}
+        \item The recorded fish do not exhibit jamming avoidance behavior while close during synchronous modulations.
-% \myblock[TranspBlock]{More Results}{
+        \item Synchronous signals \textbf{initiate} spatio-temporal interactions.
-%     \begin{tikzfigure}[]
+    \end{itemize}
-%         \label{results}
+    \vspace{0.2cm}
-%         \includegraphics[width=\linewidth]{example-image-a}
+    }
-%     \end{tikzfigure}
+    \end{columns}
-
+
-%     \begin{multicols}{2}
+\node [above right,
-%     \lipsum[5][1-8]
-%     \end{multicols}
-%     \vspace{-1cm}
-% }
-
-% \myblock[TranspBlock]{Conclusion}{
-%     \begin{itemize}
-%         \setlength\itemsep{0.5em}
-%         \item \lipsum[1][1]
-%         \item \lipsum[1][1]
-%         \item \lipsum[1][1]
-%     \end{itemize}
-%     \vspace{0.2cm}
-%     }
-\end{columns}
-
-\node[
-    above right,
     text=white,
     outer sep=45pt,
     minimum width=\paperwidth,
     align=center,
     draw,
     fill=boxes,
-    color=boxes,
+    color=boxes] at (-43.6,-61) {
-] at (-0.51\paperwidth,-43.5) {
+        \textcolor{white}{
-\textcolor{text}{\normalsize Contact: \{name\}.\{surname\}@student.uni-tuebingen.de}};
+    \normalsize Contact: \{name\}.\{surname\}@student.uni-tuebingen.de}};
 
 \end{document}

poster/packages.tex

@@ -8,4 +8,3 @@
 \setlength{\columnsep}{1.5cm}
 \usepackage{xspace}
 \usepackage{tikz}
-\usepackage{lipsum}

poster/style.tex

@@ -1,9 +1,9 @@
 \tikzposterlatexaffectionproofoff
 \usetheme{Default}
 
-\definecolor{text}{HTML}{e0e4f7}
+\definecolor{text}{HTML}{ffffff}
-\definecolor{background}{HTML}{111116}
+\definecolor{background}{HTML}{080808}
-\definecolor{boxes}{HTML}{2a2a32}
+\definecolor{boxes}{HTML}{1E1E1E}
 \definecolor{unired}{HTML}{a51e37}
 
 \colorlet{blocktitlefgcolor}{text}
@@ -16,10 +16,11 @@
 \colorlet{notefgcolor}{background}
 \colorlet{notebgcolor}{background}
 
+
 % Title setup
 \settitle{
 % Rearrange the order of the minipages to e.g. center the title between the logos
-\begin{minipage}[c]{0.6\paperwidth}
+\begin{minipage}[c]{0.8\paperwidth}
 %    \centering
     \vspace{2.5cm}\hspace{1.5cm}
     \color{text}{\Huge{\textbf{\@title}} \par}
@@ -30,26 +31,28 @@
     \vspace{2.5cm}
 \end{minipage}
 \begin{minipage}[c]{0.2\paperwidth}
-%    \centering
-    \vspace{1cm}\hspace{1cm}
-    \includegraphics[scale=1]{example-image-a}
-\end{minipage}
-\begin{minipage}[c]{0.2\paperwidth}
-%    \vspace{1cm}\hspace{1cm}
     \centering
-    \includegraphics[scale=1]{example-image-a}
+    % \vspace{1cm}
+    \hspace{-10cm}
+    \includegraphics[width=\linewidth]{example-image-a}
 \end{minipage}}
+% \begin{minipage}[c]{0.2\paperwidth}
+%     \vspace{1cm}\hspace{1cm}
+%     \centering
+%     \includegraphics[width=\linewidth]{example-image-a}
+% \end{minipage}}
 
-% definie title style with background box
+% define title style with background box (currently white)
 \definetitlestyle{sampletitle}{
-    width=1189mm,
+    width=841mm,
     roundedcorners=0,
     linewidth=0pt,
     innersep=15pt,
     titletotopverticalspace=0mm,
     titletoblockverticalspace=5pt
 }{
-    \begin{scope}[line width=\titlelinewidth, rounded corners=\titleroundedcorners]
+    \begin{scope}[line width=\titlelinewidth,
+        rounded corners=\titleroundedcorners]
     \draw[fill=text, color=boxes]
     (\titleposleft,\titleposbottom)
     rectangle

poster_old/main.tex

@@ -0,0 +1,119 @@
+\documentclass[25pt, a0paper, landscape, margin=0mm, innermargin=20mm,
+blockverticalspace=2mm, colspace=20mm, subcolspace=0mm]{tikzposter} %Default values for poster format options.
+
+\input{packages}
+\input{style}
+
+\begin{document}
+
+\renewcommand{\baselinestretch}{1}
+\title{\parbox{1900pt}{Pushing the limits of time-frequency uncertainty in the
+detection of transient communication signals in weakly electric fish}}
+\author{Sina Prause, Alexander Wendt, Patrick Weygoldt}
+\institute{Supervised by Till Raab \& Jan Benda, Neurothology Group,
+University of Tübingen}
+\usetitlestyle[]{sampletitle}
+\maketitle
+\renewcommand{\baselinestretch}{1.4}
+
+\begin{columns}
+\column{0.5}
+\myblock[TranspBlock]{Introduction}{
+    \begin{minipage}[t]{0.55\linewidth}
+        The time-frequency tradeoff makes reliable signal detecion and simultaneous
+        sender identification of freely interacting individuals impossible.
+        This profoundly limits our current understanding of chirps to experiments
+        with single - or physically separated - individuals.
+    \end{minipage} \hfill
+    \begin{minipage}[t]{0.40\linewidth}
+    \vspace{-1.5cm}
+    \begin{tikzfigure}[]
+        \label{tradeoff}
+        \includegraphics[width=\linewidth]{figs/introplot}
+    \end{tikzfigure}
+    \end{minipage}
+}
+
+\myblock[TranspBlock]{A chirp detection algorithm}{
+        \begin{tikzfigure}[]
+            \label{modulations}
+            \includegraphics[width=\linewidth]{figs/algorithm}
+        \end{tikzfigure}
+}
+
+\column{0.5}
+\myblock[TranspBlock]{Chirps and diadic competitions}{
+    \begin{minipage}[t]{0.7\linewidth}
+    \begin{tikzfigure}[]
+        \label{modulations}
+        \includegraphics[width=\linewidth]{figs/placeholder1}
+    \end{tikzfigure}
+    \end{minipage} \hfill
+    \begin{minipage}[t]{0.25\linewidth}
+        \lipsum[3][1-3]
+    \end{minipage}
+
+    \begin{minipage}[t]{0.7\linewidth}
+    \begin{tikzfigure}[]
+        \label{modulations}
+        \includegraphics[width=\linewidth]{figs/placeholder1}
+    \end{tikzfigure}
+    \end{minipage} \hfill
+    \begin{minipage}[t]{0.25\linewidth}
+        \lipsum[3][1-3]
+    \end{minipage}
+
+    \begin{minipage}[t]{0.7\linewidth}
+    \begin{tikzfigure}[]
+        \label{modulations}
+        \includegraphics[width=\linewidth]{figs/placeholder1}
+    \end{tikzfigure}
+    \end{minipage} \hfill
+    \begin{minipage}[t]{0.25\linewidth}
+        \lipsum[3][1-3]
+    \end{minipage}
+
+
+}
+
+\myblock[TranspBlock]{Conclusion}{
+    \lipsum[3][1-9]
+}
+
+% \column{0.3}
+% \myblock[TranspBlock]{More Results}{
+%     \begin{tikzfigure}[]
+%         \label{results}
+%         \includegraphics[width=\linewidth]{example-image-a}
+%     \end{tikzfigure}
+
+%     \begin{multicols}{2}
+%     \lipsum[5][1-8]
+%     \end{multicols}
+%     \vspace{-1cm}
+% }
+
+% \myblock[TranspBlock]{Conclusion}{
+%     \begin{itemize}
+%         \setlength\itemsep{0.5em}
+%         \item \lipsum[1][1]
+%         \item \lipsum[1][1]
+%         \item \lipsum[1][1]
+%     \end{itemize}
+%     \vspace{0.2cm}
+%     }
+\end{columns}
+
+\node[
+    above right,
+    text=white,
+    outer sep=45pt,
+    minimum width=\paperwidth,
+    align=center,
+    draw,
+    fill=boxes,
+    color=boxes,
+] at (-0.51\paperwidth,-43.5) {
+\textcolor{text}{\normalsize Contact: \{name\}.\{surname\}@student.uni-tuebingen.de}};
+
+\end{document}

poster_old/packages.tex

@@ -0,0 +1,11 @@
+\usepackage[utf8]{inputenc}
+\usepackage[scaled]{helvet}
+\renewcommand\familydefault{\sfdefault}
+\usepackage[T1]{fontenc}
+\usepackage{wrapfig}
+\usepackage{setspace}
+\usepackage{multicol}
+\setlength{\columnsep}{1.5cm}
+\usepackage{xspace}
+\usepackage{tikz}
+\usepackage{lipsum}

poster_old/style.tex

@@ -0,0 +1,119 @@
+\tikzposterlatexaffectionproofoff
+\usetheme{Default}
+
+\definecolor{text}{HTML}{e0e4f7}
+\definecolor{background}{HTML}{111116}
+\definecolor{boxes}{HTML}{2a2a32}
+\definecolor{unired}{HTML}{a51e37}
+
+\colorlet{blocktitlefgcolor}{text}
+\colorlet{backgroundcolor}{background}
+\colorlet{blocktitlebgcolor}{background}
+\colorlet{blockbodyfgcolor}{text}
+\colorlet{innerblocktitlebgcolor}{background}
+\colorlet{innerblocktitlefgcolor}{text}
+\colorlet{notefrcolor}{text}
+\colorlet{notefgcolor}{background}
+\colorlet{notebgcolor}{background}
+
+% Title setup
+\settitle{
+% Rearrange the order of the minipages to e.g. center the title between the logos
+\begin{minipage}[c]{0.6\paperwidth}
+%    \centering
+    \vspace{2.5cm}\hspace{1.5cm}
+    \color{text}{\Huge{\textbf{\@title}} \par}
+    \vspace*{2em}\hspace{1.5cm}
+    \color{text}{\LARGE \@author \par}
+    \vspace*{2em}\hspace{1.5cm}
+    \color{text}{\Large \@institute}
+    \vspace{2.5cm}
+\end{minipage}
+\begin{minipage}[c]{0.2\paperwidth}
+%    \centering
+    \vspace{1cm}\hspace{1cm}
+    \includegraphics[scale=1]{example-image-a}
+\end{minipage}
+\begin{minipage}[c]{0.2\paperwidth}
+%    \vspace{1cm}\hspace{1cm}
+    \centering
+    \includegraphics[scale=1]{example-image-a}
+\end{minipage}}
+
+% definie title style with background box
+\definetitlestyle{sampletitle}{
+    width=1189mm,
+    roundedcorners=0,
+    linewidth=0pt,
+    innersep=15pt,
+    titletotopverticalspace=0mm,
+    titletoblockverticalspace=5pt
+}{
+    \begin{scope}[line width=\titlelinewidth, rounded corners=\titleroundedcorners]
+    \draw[fill=text, color=boxes]
+    (\titleposleft,\titleposbottom)
+    rectangle
+    (\titleposright,\titlepostop);
+    \end{scope}
+}
+
+% define coustom block style for visible blocks
+\defineblockstyle{GrayBlock}{
+    titlewidthscale=1,
+    bodywidthscale=1,
+    % titlecenter,
+    titleleft,
+    titleoffsetx=0pt,
+    titleoffsety=-30pt,
+    bodyoffsetx=0pt,
+    bodyoffsety=-40pt,
+    bodyverticalshift=0mm,
+    roundedcorners=25,
+    linewidth=1pt,
+    titleinnersep=20pt,
+    bodyinnersep=38pt
+}{
+    \draw[rounded corners=\blockroundedcorners, inner sep=\blockbodyinnersep,
+          line width=\blocklinewidth, color=background,
+          top color=boxes, bottom color=boxes,
+          ]
+      (blockbody.south west) rectangle (blockbody.north east); %
+    \ifBlockHasTitle%
+        \draw[rounded corners=\blockroundedcorners, inner sep=\blocktitleinnersep,
+          top color=background, bottom color=background,
+          line width=2, color=background, %fill=blocktitlebgcolor
+          ]
+      (blocktitle.south west) rectangle (blocktitle.north east); %
+    \fi%
+}
+\newcommand\myblock[3][GrayBlock]{\useblockstyle{#1}\block{#2}{#3}\useblockstyle{Default}}
+
+% Define blockstyle for tranparent block
+\defineblockstyle{TranspBlock}{
+    titlewidthscale=0.99,
+    bodywidthscale=0.99,
+    titleleft,
+    titleoffsetx=15pt,
+    titleoffsety=-40pt,
+    bodyoffsetx=0pt,
+    bodyoffsety=-40pt,
+    bodyverticalshift=0mm,
+    roundedcorners=25,
+    linewidth=1pt,
+    titleinnersep=20pt,
+    bodyinnersep=38pt
+}{
+    \draw[rounded corners=\blockroundedcorners, inner sep=\blockbodyinnersep,
+          line width=\blocklinewidth, color=background,
+          top color=background, bottom color=background,
+          ]
+      (blockbody.south west) rectangle (blockbody.north east); %
+    \ifBlockHasTitle%
+        \draw[rounded corners=\blockroundedcorners, inner sep=\blocktitleinnersep,
+          top color=background, bottom color=background,
+          line width=2, color=background, %fill=blocktitlebgcolor
+          ]
+      (blocktitle.south west) rectangle (blocktitle.north east); %
+    \fi%
+}
+\renewcommand\myblock[3][TranspBlock]{\useblockstyle{#1}\block{#2}{#3}\useblockstyle{Default}}