| data | ||
| doc | ||
| removed | ||
| removed2 | ||
| .gitignore | ||
| ~$ench_Zitate.docx | ||
| ampullary.pdf | ||
| ampullary.py | ||
| cells_suscept_high_CV.pdf | ||
| cells_suscept_high_CV.py | ||
| cells_suscept.pdf | ||
| cells_suscept.py | ||
| data_overview_mod.pdf | ||
| data_overview_mod.py | ||
| desktop.ini | ||
| flowchart.pdf | ||
| flowchart.py | ||
| French_Zitate.docx | ||
| gwn50Hz10s0.3.dat | ||
| gwn150Hz10s0.3.dat | ||
| gwn150Hz10s0.3short.dat | ||
| gwn300Hz10s0.3.dat | ||
| gwn300Hz10s0.3short.dat | ||
| gwn300Hz50s0.3.dat | ||
| iscience.bst | ||
| iscience.dbj | ||
| journalsabbrv.bib | ||
| journalsabbrv.bib.bak | ||
| Makefile | ||
| model_and_data.pdf | ||
| model_and_data.py | ||
| model_full.pdf | ||
| model_full.py | ||
| motivation-calc_auc_three_core-spikes_core_AUCI_multsorted2__psdEOD_all.pkl | ||
| motivation.pdf | ||
| motivation.py | ||
| nonlin_regime_afe_0.01_nfft_400000_len_100_psd.npy | ||
| nonlin_regime_afe_0.01_nfft_400000_len_100_psdf.npy | ||
| nonlin_regime_psd.npy | ||
| nonlin_regime_psdf.npy | ||
| nonlin_regime.pdf | ||
| nonlin_regime.py | ||
| plos2015.bst | ||
| plot_chi2.pdf | ||
| plot_chi2.py | ||
| plotstyle.py | ||
| README.md | ||
| references_bibertool.bib | ||
| references.bib | ||
| Settup.pptx | ||
| susceptibility1.tex | ||
| trialnr.pdf | ||
| trialnr.py | ||
Tabele with all cell information considering RAM overview analysis is saved in data/ as data_overview_mod.csv
frame = pd.read_csv('data_overview_mod.csv')
see data_overview_mod.py for loading and filtering.
The susceptibility model is calculated in threefish\threefish\RAM\calc_model with calc_RAM_model() The data single cell suceptiblity matrices are calculated in threefish\threefish\RAM\calc_model with calc_RAM_model() and the overview for data_overview_mod are calculated with calc_RAM_overview()
You cannot use the develop folder (e.g. to change the cells chosen) from the susceptiblity folder. But all data and the folder structure is on anaconda in /home/rudnaya/Desktop/Masterarbeit/work/code There you can rerun all scripts (the code is in there) and the data is saved automatically, and can be then retrieved in the susceptibility or twobeat folder by runing the redo paramter if defining yourself as the develop folder See README in /home/rudnaya/Desktop/Masterarbeit/work/code