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added a few more general notes

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Jan Benda 2021-01-02 12:02:11 +01:00
parent 16aa2b8f4b
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2 changed files with 10 additions and 5 deletions
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regression/lecture/regression-chapter.tex
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@ -21,6 +21,8 @@
\subsection{Notes} \subsection{Notes}
\begin{itemize} \begin{itemize}
\item Fig 8.2 right: this should be a chi-squared distribution with one degree of freedom! \item Fig 8.2 right: this should be a chi-squared distribution with one degree of freedom!
\item Gradient ascent is used by bacteria and worms (and others) to
approach food sources along chemical and temperature gradients (using biased random walks).
\end{itemize} \end{itemize}
\subsection{New chapter: non-linear fits} \subsection{New chapter: non-linear fits}

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scientificcomputing-script.tex
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@ -51,9 +51,10 @@
% We therefore expose you to some mathematical equations % We therefore expose you to some mathematical equations
% that do not go beyond what you learned at school. % that do not go beyond what you learned at school.
% - most concepts are also quite relevant for the brain itself! % - most concepts are also quite relevant for the brain itself!
% The brain also needs to analyse the data coming in from the senses.
% - modern approaches: % - modern approaches:
% * open source science (open data, open code, open algorithmns in contrast % * open source science (open data, open code, open algorithmns in contrast
% to closed source license models) % to closed source license models), FAIR
% * knowledge is freedom ... % * knowledge is freedom ...
% * do not consume what companies offer you but know what you want and implement it % * do not consume what companies offer you but know what you want and implement it
% * python as a modern and popular programming language in modern science % * python as a modern and popular programming language in modern science
@ -75,7 +76,7 @@
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
\part{Data analysis} \part{Data analysis}
%\part{Basic statistics} %\subpart{Basic statistics}
% With an intro saying statistical tests are overrated! % With an intro saying statistical tests are overrated!
% add chapter on stochastic simulations (draw random numbers, draw random functions) % add chapter on stochastic simulations (draw random numbers, draw random functions)
@ -97,7 +98,7 @@
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
%\part{Time series} %\subpart{Time series}
% add chapter on simulations of dynamical systems/time series (euler % add chapter on simulations of dynamical systems/time series (euler
% forward, odeint, iterated maps, dynamical system, bifurcations?) % forward, odeint, iterated maps, dynamical system, bifurcations?)
@ -124,7 +125,7 @@
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
%\part{Machine learning} %\subpart{Machine learning}
% add chapters on linear algebra, PCA, clustering, see linearalgebra/ % add chapters on linear algebra, PCA, clustering, see linearalgebra/
@ -135,6 +136,7 @@
% add chapter on Markup and LaTeX -> see latex/ % add chapter on Markup and LaTeX -> see latex/
% with an introduction on mark-up in general, an outlook to markdown, html, xml, jason, yaml % with an introduction on mark-up in general, an outlook to markdown, html, xml, jason, yaml
% make notes, data, and texts understandable by computers!
% Makefile % Makefile
% distributed computing (ssh and grid engines) % distributed computing (ssh and grid engines)
@ -142,7 +144,8 @@
% see replicability/ : % see replicability/ :
% version control (git and github) only put source files into repository! % version control (git and github) only put source files into repository!
% data handling (structure, storage (rsync), backup, data bases) % data handling (structure, storage (rsync), backup, data bases)
% data annotation, meta data % data annotation, meta data, FAIR
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%% %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
\appendix \appendix