nkoch/model_mutations_2022
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nkoch1 a0f64fd365 Changed firing_characterization-jb.py to firing_characterization.py 
and old firing_characterization file to firing_characterization_old.py
 also renamed ramp_examples.py as ramp_firing.py; cleaned up comments
 and code for rheobase_correlation.py, AUC_correlation.py, diversity_in_firing.py,
 ramp_firing.py, simulation_model_comparison.py
2022-06-11 20:28:22 -04:00
Figure_org Initial updated figures with emacs .org files in ./Figure_org/ 2022-02-16 15:48:34 -05:00
Figures Changed firing_characterization-jb.py to firing_characterization.py 2022-06-11 20:28:22 -04:00
eNeuro_title_page.docx Needed to add files to git 2022-04-03 19:36:07 -04:00
eneuro.bst add some references in intro and created bibliography style 2022-05-16 22:50:15 -04:00
g_table.tex Changes with Jan's comments, altered tables and added plotstyle.py 2022-05-18 10:38:26 -04:00
gating_table.tex Changes with Jan's comments, altered tables and added plotstyle.py 2022-05-18 10:38:26 -04:00
Makefile little fixes and removed some comments 2022-05-23 12:20:43 +02:00
manuscript.tex updated figure legends for fig 3 and 4 for new figure versions 2022-05-23 22:16:35 -04:00
plotstyle.py Update figures to be correct widths (17.6 and 8.5 cm) 2022-03-13 22:51:10 -04:00
README.md updated readme.md to include gating_table.tex 2022-04-13 00:23:36 -04:00
ref.bib small changes in manuscript 2022-05-19 10:11:02 -04:00

README.md

Manuscript repository for paper from Nils' Master Thesis

Manuscript for the modelling on the effects of ion current property changes on firing behaviour in diverse neuronal models and in with Kv1.1 mutations that cause episodic ataxia type 1.

./Figure_org

  • Contains org mode files for the create of a pdf report and a beamer presentation of the figure
  • Figure_update.org is the report
  • Figure_update_Beamer.org is the presentation

./Figures

Figures and python files for generating them

plotstyle.py

Styles for figures

manuscript.tex

Latex manuscript file

ref.bib

References for manuscript.tex

g_table.tex

Latex file for table of conductance values in models

gating_table.tex

Latex file for table of gating values fit

eNeuro_title_page.docx

Required word title page file