30 lines
663 B
Markdown
30 lines
663 B
Markdown
# How to use the fish book
|
|
|
|
## Requirements
|
|
* Python3.5+ only
|
|
* [datajoint](https://datajoint.io) to connect to the database and to map python objects to table entries.
|
|
* [nixio](https://github.com/g-node/nixpy) to read the relacs-flavored nix files
|
|
|
|
|
|
## Installation
|
|
|
|
1) clone the repository
|
|
|
|
```
|
|
git clone https://whale.am28.uni-tuebingen.de/git/jgrewe/fishbook.git .
|
|
```
|
|
|
|
2) installation
|
|
..a) for development, install for the current user, install as "editable"
|
|
```Shell
|
|
cd fishbook
|
|
pip3 install fishbook -e --user
|
|
```
|
|
b) just for usage
|
|
```
|
|
pip3 install fishbook --user
|
|
# or
|
|
sudo pip3 install fishbook
|
|
```
|
|
|
|
3) connecting to the database |