1.1 KiB
1.1 KiB
How to use the fishbook
Requirements & Installation
- Python 3.5+ only, no python 2
- datajoint to connect to the database and to map python objects to table entries.
- nixio to read the relacs-flavored nix files during import or later during data retrieval.
Clone the repository
>> git clone https://whale.am28.uni-tuebingen.de/git/jgrewe/fishbook.git
Install
When installing for development: install for the current user, install as "editable":
>> cd fishbook
>> pip3 install -e fishbook --user
When installing for use:
>> pip3 install fishbook --user
# or, for system-wide installation
>> sudo pip3 install fishbook
Running fishbook
To run fishbook you need access to a database server. If you have access to one proceed with configuring the project. Otherwise, if you want to run it using a local database server see these instructions.
import fishbook as fb