[updating to read phy]

oephys2nix/sorting.py

@@ -4,6 +4,8 @@ import pathlib
 import nixio
 import numpy as np
 import spikeinterface.core as si
+import spikeinterface.extractors as extractors
+from IPython import embed
 from nixio.exceptions import DuplicateName
 from rich.console import Console
 
@@ -28,7 +30,7 @@ class AppendSorting:
     def __init__(self, sorter_path: pathlib.Path, recording_path: pathlib.Path):
         self.sorter_path = sorter_path
         self.recording_path = recording_path
-        self.sorting = si.load_sorting_analyzer(self.sorter_path)
+        self.sorting = extractors.read_phy(self.sorter_path)
         self.nixfile = nixio.File.open(str(self.recording_path), nixio.FileMode.ReadWrite)
         self.block = self.nixfile.blocks[0]
         self.das = self.block.data_arrays