Alexander/P-unit_model
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alexanderott c6e07207f3 add and change functions to run parrelal fitting of cells with const refractory period
2020-06-01 12:19:31 +02:00
introduction
renaming of functions
2020-05-20 16:19:36 +02:00
models
add refractory time
2020-05-27 09:12:28 +02:00
stimuli
allow non int indexes as simulation time may not be a multiple of the sampling time (TODO fix the simulation time?)
2020-04-02 10:03:48 +02:00
tests
add refratory period to fitting, add burstiness error
2020-05-27 13:36:14 +02:00
unittests
add test for bustiness
2020-06-01 12:17:25 +02:00
.gitignore
add test_routines folder
2020-05-26 18:13:14 +02:00
AdaptionCurrent.py
adapt for new FiCurve class
2020-05-20 16:19:36 +02:00
Baseline.py
add option for test plot in get_bustiness
2020-06-01 12:17:04 +02:00
CellData.py
add refratory period to fitting, add burstiness error
2020-05-27 13:36:14 +02:00
DataParserFactory.py
add functions to read SAM behaviour of data cells
2020-05-27 09:11:57 +02:00
FiCurve.py
add refratory period to fitting, add burstiness error
2020-05-27 13:36:14 +02:00
Fitter.py
add routine for fitting with const refractory period
2020-06-01 12:18:42 +02:00
functions.py
add tests for sinusoidalStep, add FiCurve plot possibilities (temp), add initial simplex generation
2020-03-16 17:17:05 +01:00
helperFunctions.py
change detect spikes approach
2020-05-20 16:19:36 +02:00
main.py
commit all..
2020-05-10 13:55:48 +02:00
README.md
Initial commit
2019-12-20 13:23:17 +01:00
RelationAdaptionVariables.py
tests, correct stimulus-type for fi-curve, general changes
2020-03-11 18:03:21 +01:00
run_Fitter.py
add and change functions to run parrelal fitting of cells with const refractory period
2020-06-01 12:19:31 +02:00
sam_experiments.py
plot cell reaction to SAM stimulus
2020-05-27 09:13:39 +02:00
Sam.py
add file to play with SAM behaviour
2020-05-27 09:11:23 +02:00
Sounds.py
to test remotely
2020-04-16 15:48:42 +02:00
variableEffect.py
add second set of parameters add additional variable to check
2020-05-20 16:19:36 +02:00

README.md

neuronModel

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Description
A leaky integrate-and-fire model with adaption current for P-units.
Readme 52 MiB
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Python 83%
TeX 16.9%