Alexander/P-unit_model
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renaming of functions

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This commit is contained in:
a.ott 2020-05-20 15:20:22 +02:00
parent 869923a2be
commit e92197d0ba
2 changed files with 5 additions and 5 deletions
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6
CellData.py
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@ -100,14 +100,14 @@ class CellData:
return contrast return contrast
def get_mean_isi_frequencies(self): def get_mean_fi_curve_isi_frequencies(self):
if self.mean_isi_frequencies is None: if self.mean_isi_frequencies is None:
self.time_axes, self.mean_isi_frequencies = hf.all_calculate_mean_isi_frequency_traces( self.time_axes, self.mean_isi_frequencies = hf.all_calculate_mean_isi_frequency_traces(
self.get_fi_spiketimes(), self.get_sampling_interval()) self.get_fi_spiketimes(), self.get_sampling_interval())
return self.mean_isi_frequencies return self.mean_isi_frequencies
def get_time_axes_mean_frequencies(self): def get_time_axes_fi_curve_mean_frequencies(self):
if self.time_axes is None: if self.time_axes is None:
self.time_axes, self.mean_isi_frequencies = hf.all_calculate_mean_isi_frequency_traces( self.time_axes, self.mean_isi_frequencies = hf.all_calculate_mean_isi_frequency_traces(
self.get_fi_spiketimes(), self.get_sampling_interval()) self.get_fi_spiketimes(), self.get_sampling_interval())
@ -116,7 +116,7 @@ class CellData:
def get_base_frequency(self): def get_base_frequency(self):
base_freqs = [] base_freqs = []
for freq in self.get_mean_isi_frequencies(): for freq in self.get_mean_fi_curve_isi_frequencies():
delay = self.get_delay() delay = self.get_delay()
sampling_interval = self.get_sampling_interval() sampling_interval = self.get_sampling_interval()
if delay < 0.1: if delay < 0.1:

4
introduction/old_helper_functions.py
View File

@ -84,8 +84,8 @@ def crappy_smoothing(signal:list, window_size:int = 5) -> list:
def plot_frequency_curve(cell_data, save_path: str = None, indices: list = None): def plot_frequency_curve(cell_data, save_path: str = None, indices: list = None):
contrast = cell_data.get_fi_contrasts() contrast = cell_data.get_fi_contrasts()
time_axes = cell_data.get_time_axes_mean_frequencies() time_axes = cell_data.get_time_axes_fi_curve_mean_frequencies()
mean_freqs = cell_data.get_mean_isi_frequencies() mean_freqs = cell_data.get_mean_fi_curve_isi_frequencies()
if indices is None: if indices is None:
indices = np.arange(len(contrast)) indices = np.arange(len(contrast))