This repository has been archived on 2021-05-17. You can view files and clone it, but cannot push or open issues or pull requests.
scientificComputing/scientificcomputing-script.tex

124 lines
2.4 KiB
TeX

\documentclass[12pt]{book}
\input{header}
\newcommand{\includechapter}[1]{%
\graphicspath{{#1/lecture/}{#1/lecture/figures/}{#1/images/}}%
\setcodepath{#1/code}%
\renewcommand{\texinputpath}{#1/lecture/}%
\include{#1/lecture/#1}%
}
%\includeonly{regression/lecture/regression}
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
\begin{document}
\selectlanguage{english}
\hypersetup{pageanchor=false}
\maketitle
\hypersetup{pageanchor=true}
\frontmatter
\clearpage
\tableofcontents
\clearpage
\listoffigures
\clearpage
\lstlistoflistings
\clearpage
\listofexercisefs
\clearpage
\listofiboxfs
\mainmatter
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
\part{Programming basics}
\includechapter{programming}
\includechapter{debugging}
\includechapter{plotting}
\includechapter{codestyle}
\includechapter{designpattern}
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
\part{Data analysis}
% add chapter on simulations (euler forward, odeint)
\includechapter{statistics}
\includechapter{bootstrap}
\includechapter{regression}
% add chapter on generalized linear models (versus ANOVA)
% add chapter on nonlinear fitting (methods, initial values, local minima)
\includechapter{likelihood}
\includechapter{pointprocesses}
%\includechapter{spectral}
% add chapter on ROC curves
% add chapter on digital filtering
% add chapter on event detection
% add chapter on mutual information
% add chapters on linear algebra, PCA, clustering
% add chapter on simple machine learning
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
%\part{Tools}
% Latex
% markdown
% Makefile
% version control (git and github) only put source files into repository!
% distributed computing (ssh and grid engines)
% data handling (structure, data bases, storage (rsync), backup)
% data annotation, meta data
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
\appendix
\addtocontents{toc}{\setcounter{tocdepth}{0}}
%\chapter{Cheat-Sheet}
%%%% solutions: %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
\printallsolutions
%%%% indices: %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
\backmatter
\printindex[enterm]
\printindex[determ]
%\setindexprenote{Some explanations.}
%\printindex[pcode]
\printindex[mcode]
\end{document}