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scientificComputing/projects/project_fano_slope/lifboltzmanspikes.m
2014-11-02 13:35:52 +01:00

52 lines
1.4 KiB
Matlab

function spikes = lifboltzmanspikes( trials, input, tmaxdt, D, imax, ithresh, slope )
% Generate spike times of a leaky integrate-and-fire neuron
% trials: the number of trials to be generated
% input: the stimulus either as a single value or as a vector
% tmaxdt: in case of a single value stimulus the duration of a trial
% in case of a vector as a stimulus the time step
% D: the strength of additive white noise
% imax: maximum output of boltzman
% ithresh: threshold of boltzman input
% slope: slope factor of boltzman input
tau = 0.01;
if nargin < 4
D = 1e0;
end
if nargin < 5
imax = 20;
end
if nargin < 6
ithresh = 10;
end
if nargin < 7
slope = 1;
end
vreset = 0.0;
vthresh = 10.0;
dt = 1e-4;
if length( input ) == 1
input = input * ones( ceil( tmaxdt/dt ), 1 );
else
dt = tmaxdt;
end
inb = imax./(1.0+exp(-slope.*(input - ithresh)));
spikes = cell( trials, 1 );
for k=1:trials
times = [];
j = 1;
v = vreset;
noise = sqrt(2.0*D)*randn( length( input ), 1 )/sqrt(dt);
for i=1:length( noise )
v = v + ( - v + noise(i) + inb(i))*dt/tau;
if v >= vthresh
v = vreset;
times(j) = i*dt;
j = j + 1;
end
end
spikes{k} = times;
end
end