cleaned header.tex
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header.tex
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header.tex
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%%%%% title %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
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\title{\textbf{\huge\sffamily\tr{Introduction to\\[1ex] Scientific Computing}%
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{Einf\"uhrung in die\\[1ex] wissenschaftliche Datenverarbeitung}}}
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%%%%% title %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
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\title{\textbf{\huge\sffamily\tr{Introduction to\\[1ex] Scientific Computing}{Einf\"uhrung in die\\[1ex] wissenschaftliche Datenverarbeitung}}}
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\author{{\LARGE Jan Grewe \& Jan Benda}\\[5ex]Abteilung Neuroethologie\\[2ex]\includegraphics[width=0.3\textwidth]{UT_WBMW_Rot_RGB}\vspace{3ex}}
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\date{WS 2017/2018\\\vfill \centerline{\includegraphics[width=0.7\textwidth]{announcements/correlationcartoon}\rotatebox{90}{\footnotesize\url{www.xkcd.com}}}}
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\author{{\LARGE Jan Grewe \& Jan Benda}\\[5ex]Abteilung Neuroethologie\\[2ex]%
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\includegraphics[width=0.3\textwidth]{UT_WBMW_Rot_RGB}\vspace{3ex}}
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%%%% language %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
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% \newcommand{\tr}[2]{#1} % en
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% \usepackage[english]{babel}
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\date{WS 2017/2018\\\vfill%
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\centerline{\includegraphics[width=0.7\textwidth]{announcements/correlationcartoon}%
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\rotatebox{90}{\footnotesize\url{www.xkcd.com}}}}
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%%%% language %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
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\newcommand{\tr}[2]{#1} % en
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% \newcommand{\tr}[2]{#2} % de
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\usepackage[ngerman,english]{babel}
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%%%% encoding %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
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%%%% encoding %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
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\usepackage[T1]{fontenc}
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%%%% layout %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
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\usepackage[left=25mm,right=25mm,top=20mm,bottom=30mm]{geometry}
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%%%% fonts %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
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\usepackage{pslatex} % nice font for pdf file
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%%%% layout %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
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\usepackage[left=25mm,right=25mm,top=20mm,bottom=30mm]{geometry}
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\usepackage[within=chapter]{newfloat}
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\usepackage{tocloft}
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\setlength{\cftfigindent}{1.2em}
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\setlength{\cftfignumwidth}{2.6em}
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%%%%% section style %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
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%%%%% section style %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
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\usepackage[sf,bf,it,big,clearempty]{titlesec}
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\setcounter{secnumdepth}{1}
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\setcounter{tocdepth}{1}
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%%%%% index %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
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%%%%% index %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
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\usepackage[makeindex]{splitidx}
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\makeindex
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\usepackage[totoc]{idxlayout}
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@ -36,14 +42,14 @@
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\newindex[\tr{MATLAB code}{MATLAB Code}]{mcode}
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\newindex[\tr{Python code}{Python Code}]{pcode}
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%%%%% units %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
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%%%%% units %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
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\usepackage[mediumspace,mediumqspace,Gray]{SIunits} % \ohm, \micro
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%%%%% graphics %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
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%%%%% graphics %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
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\usepackage{subcaption}
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\usepackage{graphicx}
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%%%%%%%%%%%%% colors %%%%%%%%%%%%%%%%
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%%%%%%%%%%%%% colors %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
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\usepackage{xcolor}
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\definecolor{myyellow}{HTML}{FFEE00}
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\definecolor{myblue}{HTML}{0055DD}
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@ -60,7 +66,7 @@
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\pagecolor{white}
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%%%%% figures %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
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%%%%% figures %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
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% gnuplot figures:
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\newcommand{\texinputpath}{}
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\newcommand{\texpicture}[1]{{\sffamily\footnotesize\input{\texinputpath#1.tex}}}
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@ -100,7 +106,7 @@
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% put caption on separate float:
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\newcommand{\breakfloat}{\end{figure}\begin{figure}[t]}
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%%%%% figure references %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
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%%%%% figure references %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
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% references to panels of a figure within the caption:
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\newcommand{\figitem}[1]{\textsf{\bfseries\uppercase{#1}}}
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% references to figures:
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@ -128,7 +134,10 @@
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\newcommand{\subfigrefb}[2]{\figb~\subfref{#1}{#2}}
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\newcommand{\subfigsrefb}[2]{\figsb~\subfref{#1}{#2}}
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%%%%% table references %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
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%%%%%%%%%%%%% tables %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
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\usepackage{multirow}
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%%%%% table references %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
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\newcommand{\tref}[1]{\textup{\ref{#1}}}
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% references to tables in normal text:
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\newcommand{\tab}{\tr{Tab.}{Tabelle}}
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@ -150,7 +159,7 @@
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% invisible rule for expanding the height of a row in a table body:
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\newcommand{\erb}{\rule{0pt}{2.5ex}}
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%%%%% equation references %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
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%%%%% equation references %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
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%\newcommand{\eqref}[1]{(\ref{#1})}
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\newcommand{\eqn}{\tr{Eq}{Gl}.}
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\newcommand{\Eqn}{\tr{Eq}{Gl}.}
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@ -161,7 +170,19 @@
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\newcommand{\eqnsref}[1]{\eqns~\eqref{#1}}
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\newcommand{\Eqnsref}[1]{\Eqns~\eqref{#1}}
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%%%%% listings %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
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%%%%% math stuff: %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
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\usepackage{amsmath}
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\usepackage{bm}
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\usepackage{dsfont}
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\newcommand{\naZ}{\mathds{N}}
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\newcommand{\gaZ}{\mathds{Z}}
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\newcommand{\raZ}{\mathds{Q}}
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\newcommand{\reZ}{\mathds{R}}
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\newcommand{\reZp}{\mathds{R^+}}
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\newcommand{\reZpN}{\mathds{R^+_0}}
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\newcommand{\koZ}{\mathds{C}}
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%%%%% listings %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
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\usepackage{listings}
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\lstset{
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basicstyle=\ttfamily\footnotesize,
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\let\l@lstlisting\l@figure
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\makeatother
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%%%%%%%%%%%%% Table stuff %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
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\usepackage{multirow}
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%%%%% math stuff: %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
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\usepackage{amsmath}
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\usepackage{bm}
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\usepackage{dsfont}
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\newcommand{\naZ}{\mathds{N}}
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\newcommand{\gaZ}{\mathds{Z}}
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\newcommand{\raZ}{\mathds{Q}}
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\newcommand{\reZ}{\mathds{R}}
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\newcommand{\reZp}{\mathds{R^+}}
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\newcommand{\reZpN}{\mathds{R^+_0}}
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\newcommand{\koZ}{\mathds{C}}
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%%%%% english, german, code and file terms: %%%%%%%%%%%%%%%
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%%%%% english, german, code and file terms: %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
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\usepackage{ifthen}
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\newcommand{\enterm}[2][]{\tr{\textit{#2}}{``#2''}\ifthenelse{\equal{#1}{}}{\tr{\protect\sindex[term]{#2}}{\protect\sindex[enterm]{#2}}}{\tr{\protect\sindex[term]{#1}}{\protect\sindex[enterm]{#1}}}}
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\newcommand{\determ}[2][]{\tr{``#2''}{\textit{#2}}\ifthenelse{\equal{#1}{}}{\tr{\protect\sindex[determ]{#2}}{\protect\sindex[term]{#2}}}{\tr{\protect\sindex[determ]{#1}}{\protect\sindex[term]{#1}}}}
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% for escaping special characters into the index:
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\newcommand{\scor}{"|}
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%%%%% key-shortcuts %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
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%%%%% key-shortcuts %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
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\usepackage{tikz}
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\usetikzlibrary{shapes}
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\tikzstyle{keybox} = [draw=blue!50!black,fill=white,thick,rectangle,rounded corners,inner sep=3pt,inner ysep=2pt]
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\newcommand{\keycode}[1]{\begin{tikzpicture}[baseline=(box.base)]\node[keybox](box){\texttt{#1}};\end{tikzpicture}}
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%%%%% code/matlab commands: %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
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%%%%% code/matlab commands: %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
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\usepackage{textcomp}
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% typeset code inline:
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\newcommand{\matlabfun}[1]{(\tr{\matlab-function}{\matlab-Funktion} \varcode{#1})\protect\sindex[mcode]{#1}}
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%%%%% shortquote and widequote commands: %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
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%%%%% shortquote and widequote commands: %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
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% \shortquote{Something to be quoted}{Source}
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\newcommand{\shortquote}[2]{\begin{list}{}{\rightmargin\leftmargin}\item\relax\itshape #1 \hfill \upshape #2\end{list}}
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% \widequote{Something to be quoted}{Source}
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\newcommand{\widequote}[2]{{\itshape #1} \hfill #2}
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%%%%% exercises environment: %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
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%%%%% exercises environment: %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
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% usage:
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%
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% \begin{exercise}{somecode.m}{someoutput.out}
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% Output:
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% content of someoutput.out
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%
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% Innerhalb der exercise Umgebung ist enumerate umdefiniert, um (a), (b), (c), .. zu erzeugen.
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% Within the exercise environment enumerate is redefined to generate (a), (b), (c), ...
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\usepackage{mdframed}
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\usepackage{xstring}
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\newlistof{exercisef}{loe}{\tr{Exercises}{\"Ubungen}}
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\newboolean{showexercisesolutions}
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\setboolean{showexercisesolutions}{true}
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\newenvironment{exercise}[2]%
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{\newcommand{\exercisesource}{#1}%
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{ \newcommand{\exercisesource}{#1}%
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\newcommand{\exercisefile}{\protect\StrSubstitute{#1}{_}{\_}}%
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\newcommand{\exerciseoutput}{#2}%
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\setlength{\fboxsep}{2mm}%
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\newcommand{\saveenumi}{\theenumi}\renewcommand{\labelenumi}{(\alph{enumi})}%
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\captionsetup{singlelinecheck=off,hypcap=false,labelfont={large,sf,it,bf},font={large,sf,it,bf},skip={0.5ex}}%
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\captionsetup{singlelinecheck=off,hypcap=false,labelfont={large,sf,it,bf},%
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font={large,sf,it,bf},skip={0.5ex}}%
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\begin{mdframed}[linewidth=0pt,backgroundcolor=exerciseback]%
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\captionof{exercisef}[\exercisefile]{}%
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\captionsetup{font={normal,sf,it}}%
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}%
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{\hypersetup{hypertexnames=false}%
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{ \renewcommand{\theenumi}{\saveenumi}%
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\ifthenelse{\boolean{showexercisesolutions}}%
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{ \hypersetup{hypertexnames=false}%
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\ifthenelse{\equal{\exercisesource}{}}{}%
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{\ifthenelse{\boolean{showexercisesolutions}}%
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{\addtocounter{lstlisting}{-1}%
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\lstinputlisting[belowskip=0pt,aboveskip=1ex,nolol=true,title={\textbf{\tr{Solution}{L\"osung}:} \exercisefile}]{\codepath\exercisesource}%
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{ \addtocounter{lstlisting}{-1}%
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\lstinputlisting[belowskip=0pt,aboveskip=1ex,nolol=true,%
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title={\textbf{\tr{Solution}{L\"osung}:} \exercisefile}]%
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{\codepath\exercisesource}%
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\ifthenelse{\equal{\exerciseoutput}{}}{}%
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{\addtocounter{lstlisting}{-1}%
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\lstinputlisting[language={},title={\textbf{\tr{Output}{Ausgabe}:}},nolol=true,belowskip=0pt]{\codepath\exerciseoutput}}}{}}%
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{ \addtocounter{lstlisting}{-1}%
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\lstinputlisting[language={},title={\textbf{\tr{Output}{Ausgabe}:}},%
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nolol=true,belowskip=0pt]%
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{\codepath\exerciseoutput}%
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}%
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}%
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\hypersetup{hypertexnames=true}%
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}{}%
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\end{mdframed}%
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\renewcommand{\theenumi}{\saveenumi}}
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}
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\setlength{\cftexercisefindent}{1.2em}
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\setlength{\cftexercisefnumwidth}{2.6em}
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%%%%% info box environment: %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
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%%%%% info box environment: %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
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% usage:
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%
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% \begin{ibox}[tp]{Python}
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\setlength{\cftiboxfnumwidth}{2.6em}
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%%%%% important environment: %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
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%%%%% important environment: %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
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% usage:
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%
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% \begin{important}[Apples are important]
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% chapterlistsgaps=on,
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% ]{importantf}
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\newenvironment{important}[1][]%
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{\captionsetup{singlelinecheck=off,hypcap=false,labelformat={empty},labelfont={large,sf,it,bf},font={large,sf,it,bf}}
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{ \captionsetup{singlelinecheck=off,hypcap=false,labelformat={empty},%
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labelfont={large,sf,it,bf},font={large,sf,it,bf}}
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\ifthenelse{\equal{#1}{}}%
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{\begin{mdframed}[linecolor=importantline,linewidth=1ex,%
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{ \begin{mdframed}[linecolor=importantline,linewidth=1ex,%
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backgroundcolor=importantback,font={\sffamily}]%
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\setlength{\parindent}{0pt}\setlength{\parskip}{1ex}}%
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{\begin{mdframed}[linecolor=importantline,linewidth=1ex,%
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\setlength{\parindent}{0pt}%
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\setlength{\parskip}{1ex}%
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}%
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{ \begin{mdframed}[linecolor=importantline,linewidth=1ex,%
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backgroundcolor=importantback,font={\sffamily},%
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frametitle={\captionof{iboxf}{#1}},frametitleaboveskip=-1ex,%
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frametitlebackgroundcolor=importantline]%
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\setlength{\parindent}{0pt}\setlength{\parskip}{1ex}}%
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}%
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{\end{mdframed}}
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\setlength{\parindent}{0pt}%
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\setlength{\parskip}{1ex}%
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}%
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}%
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{\end{mdframed}}
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%%%%% hyperref %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
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%%%%% hyperref %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
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\usepackage[bookmarks=true,bookmarksopen=true,%
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pdfpagemode=UseNone,pdfstartview=FitH,%
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plainpages=false,pdfpagelabels,%
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function m = mymedian( x )
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function m = mymedian(x)
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% returns the median of the vector x
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xs = sort( x );
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if ( length( xs ) == 0 ) % empty input vector
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xs = sort(x);
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if length(xs) == 0 % empty input vector
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m = NaN;
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elseif ( rem( length( xs ), 2 ) == 0 ) % even number of data values
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index = length( xs )/2;
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m = (xs( index ) + xs( index+1 ))/2; % average the two central elements
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elseif rem(length(xs), 2) == 0 % even number of data values
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index = length(xs)/2;
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m = (xs(index) + xs(index+1))/2; % average the two central elements
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else % odd number of data values
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index = (length( xs ) + 1)/2; % take the middle element
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m = xs( index );
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index = (length(xs) + 1)/2; % take the middle element
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m = xs(index);
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end
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end
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