From 751d977f37969ab3cdcd0cfbc41bb0badf76cbdc Mon Sep 17 00:00:00 2001 From: Jan Grewe Date: Thu, 17 Jan 2019 10:47:18 +0100 Subject: [PATCH] [stim_reconstruction] slightly different explanaition of sta --- projects/README | 1 + .../auto/face_selectivity.el | 15 --------------- .../stimulus_reconstruction.tex | 15 +++++++++------ 3 files changed, 10 insertions(+), 21 deletions(-) delete mode 100644 projects/project_face_selectivity/auto/face_selectivity.el diff --git a/projects/README b/projects/README index c8d8b7c..2ac849d 100644 --- a/projects/README +++ b/projects/README @@ -4,6 +4,7 @@ Add plotting of cost function project_eod OK, medium - difficult +b_0 is not defined project_eyetracker OK, difficult diff --git a/projects/project_face_selectivity/auto/face_selectivity.el b/projects/project_face_selectivity/auto/face_selectivity.el deleted file mode 100644 index 0e5be37..0000000 --- a/projects/project_face_selectivity/auto/face_selectivity.el +++ /dev/null @@ -1,15 +0,0 @@ -(TeX-add-style-hook - "face_selectivity" - (lambda () - (TeX-add-to-alist 'LaTeX-provided-class-options - '(("exam" "a4paper" "12pt" "pdftex"))) - (TeX-run-style-hooks - "latex2e" - "../header" - "../instructions" - "exam" - "exam12") - (TeX-add-symbols - "ptitle")) - :latex) - diff --git a/projects/project_stimulus_reconstruction/stimulus_reconstruction.tex b/projects/project_stimulus_reconstruction/stimulus_reconstruction.tex index 54fe252..c2c45be 100644 --- a/projects/project_stimulus_reconstruction/stimulus_reconstruction.tex +++ b/projects/project_stimulus_reconstruction/stimulus_reconstruction.tex @@ -13,13 +13,16 @@ \section*{Reverse reconstruction of the stimulus that evoked a neuronal response.} To analyse encoding properties of a neuron one often calculates the Spike-Triggered-Average (STA). The STA is the average stimulus that -led to a spike in the neuron and is calculated by cutting out snippets -form the stimulus centered on the respective spike time: +led to a spike in the neuron: \[ STA(\tau) = \frac{1}{n} \displaystyle\sum_{i=1}^{n}{s(t_i - \tau)} \] -where $n$ is the number of trials and $t_i$ is the time of the -$i_{th}$ spike. The Spike-Triggered-Average can be used to reconstruct -the stimulus from the neuronal response. The reconstructed stimulus -can then be compared to the original stimulus. +where $n$ is the number of spikes and $t_i$ is the time of the +$i_{th}$ spike. $\tau$ is a temporal shift relative to the spike +time. For the beginning let $\tau$ assume values in the range +$\pm50$\,ms. It can be estimated by cutting out snippets form the +stimulus centered on the respective spike time and averaging them. The +Spike-Triggered-Average can be used to reconstruct the stimulus from +the neuronal response. The reconstructed stimulus can then be compared +to the original stimulus. \begin{questions} \question In the accompanying data files you find the spike responses of