[projects] photoreceptor project update, add Makefile
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projects/project_photoreceptor/Makefile
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projects/project_photoreceptor/Makefile
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latex:
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pdflatex *.tex > /dev/null
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pdflatex *.tex > /dev/null
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clean:
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rm -rf *.log *.aux *.zip *.out auto
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rm -f `basename *.tex .tex`.pdf
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zip: latex
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zip `basename *.tex .tex`.zip *.pdf *.dat *.mat
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%%%%%%%%%%%%%% Questions %%%%%%%%%%%%%%%%%%%%%%%%%
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%%%%%%%%%%%%%% Questions %%%%%%%%%%%%%%%%%%%%%%%%%
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\section*{Analysis of insect photoreceptor data.}
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\section*{Analysis of insect photoreceptor data.}
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In this project you will analyse data from intracellular recordings of
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In this project you will analyse data from intracellular recordings of
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a fly photoreceptor. A R~1--6 photoreceptor was intracellularly
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a fly R\.1--6 photoreceptor. The membrane potential of the
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recorded and was stimulated with a light stimulus.
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photoreceptor was recorded while the cell was stimulated with a
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light stimulus.
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\begin{questions}
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\begin{questions}
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\question{} The accompanying dataset (photoreceptor\_data.zip)
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\question{} The accompanying dataset (photoreceptor\_data.zip)
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@ -50,10 +51,12 @@ recorded and was stimulated with a light stimulus.
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a function of time. This plot should also show the
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a function of time. This plot should also show the
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across-trial variability.\\[0.5ex]
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across-trial variability.\\[0.5ex]
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\part{} You will notice that the responses have three main parts, a
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\part{} You will notice that the responses have three main parts, a
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pre-stimulus phase, the phase in which the light was on, and finally a
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pre-stimulus phase, the phase in which the light was on, and
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post-stimulus time. Create an characteristic curve that plots the
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finally a post-stimulus phase. Create an characteristic curve that
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response strength as a function of the stimulus intensity for the ``onset''
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plots the response strength as a function of the stimulus
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and the ``steady state'' phases.\\[0.5ex]
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intensity for the ``onset'' and the ``steady state''
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phases.\\[0.5ex]
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\part{} The light switches on at time zero. Estimate the delay between stimulus.\\[0.5ex]
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\part{} You may also decide to analyze the post-stimulus response in some
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\part{} You may also decide to analyze the post-stimulus response in some
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more detail.
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more detail.
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\end{parts}
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\end{parts}
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