merge

projects/README

@@ -1,94 +1,104 @@
+For new projects:
+Copy project_template/ and adapt according to your needs
+
 All projects:
 
 check for time information
 
 
+1) project_activation_curve
+medium
+Write questions
 
-project_adaptation_fit
+2) project_adaptation_fit
 OK, medium
 Add plotting of cost function
 
-project_eod
+3) project_eod
 OK, medium - difficult
 b_0 is not defined
 
-project_eyetracker
+4) project_eyetracker
 OK, difficult
 no statistics, but kmeans
 
-project_fano_slope
+5) project_face_selectivity
+medium-difficult
+(Marius monkey data)
+
+6) project_fano_slope
 OK, difficult
 
-project_fano_test
+7) project_fano_test
 OK -
 
-project_fano_time
+8) project_fano_time
 OK, medium-difficult
 
-project_ficurves
+9) project_ficurves
 OK, medium
 Maybe add correlation test or fit statistics
 
-project_input_resistance
+10) project_input_resistance
 medium
 What is the problem with this project? --> No difference between segments
 Improve questions
 
-project_isicorrelations
+11) project_isicorrelations
 medium-difficult
 Need to finish solution
 
-project_isipdffit
+12) project_isipdffit
 Too technical
 
-project_lif
+13) project_lif
 OK, difficult
 no statistics
 
-project_mutualinfo
+14) project_mutualinfo
 OK, medium
 
-project_noiseficurves
+15) project_noiseficurves
 OK, simple-medium
 no statistics
 
-project_numbers
+16) project_numbers
 simple
 We might add some more involved statistical analysis
 
-project_pca_natural_images
+17) project_pca_natural_images
 medium
 Make a solution (->Lukas)
 
-project_photoreceptor
+18) project_photoreceptor
 OK, simple
 
-project_populationvector
+19) project_populationvector
 difficult
 OK
 
-project_qvalues
+20) project_power_analysis
+medium
+
+21) project_qvalues
 -
 Interesting! But needs solution.
 
-project_random_walk
+22) project_random_walk
 simple-medium
 
-project_serialcorrelation
+23) project_serialcorrelation
 OK, simple-medium
 
-project_spectra
+24) project_shorttermpotentiation
+Write questions
+
+25) project_spectra
 -
 Needs improvements and a solution
 
-project_stimulus_reconstruction
+26) project_stimulus_reconstruction
 OK, difficult
 
-project_vector_strength
+27) project_vector_strength
 OK, medium-difficult
-
-project_power_analysis
-medium
-
-Marius monkey data:
-medium-difficult

projects/project_activation_curve/activation_curve.tex

@@ -14,7 +14,7 @@
 \section{Estimation of the activation curve}
 Mutations in genes, encoding for ion channels, can result in a variety of neurological diseases like epilepsy, autism and intellectual disability. One way to find a possible treatment is to compare the voltage dependent kinetics of the mutated channel with its corresponding wild-type. These kinetics are described in voltage-clamp experiments and the subsequent data analysis. 
 
-In this task you will compute and compare the activation curves of the Nav1.6 wild-type channel and one with a mutation named A1622D (the amino acid Alanine (A) at the 1622nd position is replaced by Aspartic acid (D)) that causes intellectual disability in humans.
+In this task you will compute and compare the activation curves of the Nav1.6 wild-type channel and a variation named A1622D (the amino acid Alanine (A) at the 1622nd position is replaced by Aspartic acid (D)) that causes intellectual disability in humans.