From 31cb4a74aea5570247ca4339e0141c3f48c7471e Mon Sep 17 00:00:00 2001
From: Jan Benda <jan.benda@uni-tuebingen.de>
Date: Tue, 17 Dec 2019 09:41:50 +0100
Subject: [PATCH] [simulations] initialized new chapter

---
 .gitignore                                  |  5 +--
 scientificcomputing-script.tex              |  1 +
 simulations/lecture/Makefile                | 12 +++++++
 simulations/lecture/simulations-chapter.tex | 29 ++++++++++++++++
 simulations/lecture/simulations.tex         | 37 +++++++++++++++++++++
 5 files changed, 82 insertions(+), 2 deletions(-)
 create mode 100644 simulations/lecture/Makefile
 create mode 100644 simulations/lecture/simulations-chapter.tex
 create mode 100644 simulations/lecture/simulations.tex

diff --git a/.gitignore b/.gitignore
index f203447..a3fc3ea 100644
--- a/.gitignore
+++ b/.gitignore
@@ -8,6 +8,7 @@
 *.log
 *.loi
 *.loiboxf
+*.efexercisef
 *.aux
 *.nav
 *.out
@@ -16,10 +17,10 @@
 *.mat
 *.pdf
 *.eps
+*-solutions.tex
 .#*
 #*#
-*.~
-*.*~
+*~
 *.zip
 *.vrb
 pointprocesses/lecture/pointprocessscetch*.tex
diff --git a/scientificcomputing-script.tex b/scientificcomputing-script.tex
index 7c9af5d..e2d9334 100644
--- a/scientificcomputing-script.tex
+++ b/scientificcomputing-script.tex
@@ -61,6 +61,7 @@
 % add chapter on simulations (draw random numbers, draw random functions, euler forward, odeint)
 % !!! this would be a nice and simple starter !!!
 % introduces derivatives which are also needed for fitting
+%\includechapter{simulations}
 
 \includechapter{statistics}
 
diff --git a/simulations/lecture/Makefile b/simulations/lecture/Makefile
new file mode 100644
index 0000000..fad03bc
--- /dev/null
+++ b/simulations/lecture/Makefile
@@ -0,0 +1,12 @@
+BASENAME=simulations
+
+all : pdf 
+
+include ../../chapter.mk
+
+# script:
+pdf : chapter
+
+clean : cleanchapter
+
+cleanall : cleanallchapter
diff --git a/simulations/lecture/simulations-chapter.tex b/simulations/lecture/simulations-chapter.tex
new file mode 100644
index 0000000..d5d2ed8
--- /dev/null
+++ b/simulations/lecture/simulations-chapter.tex
@@ -0,0 +1,29 @@
+\documentclass[12pt]{book}
+
+\input{../../header}
+
+\renewcommand{\exercisesolutions}{here}  % 0: here, 1: chapter, 2: end
+
+\lstset{inputpath=../code}
+\graphicspath{{figures/}}
+
+\typein[\pagenumber]{Number of first page}
+\typein[\chapternumber]{Chapter number}
+\setcounter{page}{\pagenumber}
+\setcounter{chapter}{\chapternumber}
+
+%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+\begin{document} 
+
+\include{simulations}
+
+\section{TODO}
+\begin{itemize}
+\item draw (and plot) random numbers
+\item draw (and plot) random functions
+\item euler forward, odeint
+\item introduce derivatives which are also needed for fitting (move box from there here)
+\end{itemize}
+
+\end{document}
diff --git a/simulations/lecture/simulations.tex b/simulations/lecture/simulations.tex
new file mode 100644
index 0000000..e19b324
--- /dev/null
+++ b/simulations/lecture/simulations.tex
@@ -0,0 +1,37 @@
+%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+\chapter{Simulations}
+\label{simulationschapter}
+\exercisechapter{Simulations}
+
+Why simulations?
+
+- Understand basic concepts (as we do in the following chapters)
+- Test your data analysis algorithms
+- Explore
+- Dynamical systems
+
+%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+\section{Univariate data}
+draw (and plot) random numbers
+
+%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+\section{Static nonlinearities}
+draw (and plot) random functions
+
+%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+\section{Dynamical systems}
+
+\begin{itemize}
+\item euler forward, odeint
+\item introduce derivatives which are also needed for fitting (move box from there here)
+\end{itemize}
+
+%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+\section{Summary}
+with outook to other simulations (cellular automata, monte carlo, etc.)
+
+
+
+%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+\printsolutions