nicer nice plot with data and script
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30
plotting/code/automatic_plot.m
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30
plotting/code/automatic_plot.m
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clear all
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close all
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load('pyramidal_response.mat')
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threshold = 20; % mV
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figure()
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hold on
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plot(time, neuronal_data, 'color', [0.2 0.5 0.7], 'linewidth', 1., ...
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'displayname', 'membrane voltage')
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plot(spikes, ones(size(spikes)) .* threshold, 'ro', 'markersize', 5, ...
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'displayname', 'spike times')
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line([time(1) time(end)], [threshold threshold], 'linestyle', '--', ...
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'linewidth', 0.75, 'color', [0.5 0.5 0.9], 'displayname', 'threshold')
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xlabel('time [s]', 'fontname', 'Times', 'fontsize', 11)
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ylabel('potential [mV]', 'fontname', 'Times', 'fontsize', 11)
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title('ELL pyramidal neuron', 'fontname', 'Times', 'fontsize', 12)
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ylim([0 35])
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xlim([0 2.25])
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box('off')
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l = legend(gca,'show');
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set(l,'Location','northwest', 'Fontsize', 7, 'LineWidth', 1.);
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set(gca, 'XMinorTick','on','yMinorTick','on')
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set(gca, 'TickDir','out', 'linewidth', 1.5, 'fontname', 'Times', ...
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'fontsize', 11)
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set(gcf, 'PaperUnits', 'centimeters', 'PaperSize', [15 7.5]);
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set(gcf, 'PaperPosition',[0.0 0.0 15, 7.5], 'Color', 'white')
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saveas(gcf, [pwd '/../lecture/images/spike_detection.pdf'], 'pdf')
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BIN
plotting/code/pyramidal_response.mat
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BIN
plotting/code/pyramidal_response.mat
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