bf and cfg atdaptation
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@ -362,7 +362,7 @@ def main():
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ylim = (yspan[0] - np.abs(np.diff(yspan)) * 0.2, yspan[1] + np.abs(np.diff(yspan)) * 0.2)
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for ch in channel_array:
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h, = Plot.axs[ch].plot(np.arange(250)[:len(channel_data[ch])] / rate, channel_data[ch], color='k')
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h, = Plot.axs[ch].plot(np.arange(250)[:len(channel_data[ch])] / rate, channel_data[ch] / 1000, color='k')
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Plot.axs[ch].set_ylim(ylim)
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Plot.channel_handle.append(h)
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@ -373,7 +373,7 @@ def main():
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yspan = [np.min(channel_data[power_channel]), np.max(channel_data[power_channel])]
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ylim = [yspan[0] - np.abs(np.diff(yspan)) * 0.2, yspan[1] + np.abs(np.diff(yspan)) * 0.2]
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for ch in channel_array:
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Plot.channel_handle[ch].set_data(np.arange(250)[:len(channel_data[ch])] / rate, channel_data[ch])
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Plot.channel_handle[ch].set_data(np.arange(250)[:len(channel_data[ch])] / rate, channel_data[ch] / 1000)
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Plot.axs[ch].set_ylim(ylim)
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Plot.fig.canvas.draw()
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@ -382,14 +382,14 @@ def main():
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index = transfer_status.current_index
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if (last_idx > index) and (index != -1):
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np.array(data[last_idx:], dtype=np.float32).tofile(f)
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np.array(data[:index], dtype=np.float32).tofile(f)
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(np.array(data[last_idx:], dtype=np.float32) / 1000).tofile(f)
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(np.array(data[:index], dtype=np.float32) / 1000).tofile(f)
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f.flush()
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if index == -1:
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pass
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else:
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np.array(data[last_idx:index], dtype=np.float32).tofile(f)
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(np.array(data[last_idx:index], dtype=np.float32) / 1000).tofile(f)
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if index == -1:
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last_idx= len(data)
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115
rasp_grid_cfg.py
115
rasp_grid_cfg.py
@ -10,7 +10,7 @@ from PyQt5.QtCore import *
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class Grid_tab(QWidget):
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def __init__(self):
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super().__init__()
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self.gird_no_val = 1
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self.columns_val = 8
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self.rows_val = 8
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self.col_dist_val = 50
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@ -32,40 +32,45 @@ class Grid_tab(QWidget):
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self.setLayout(self.gridlayout)
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def get_widgets(self):
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grid_noL = QLabel('Grid no:', self)
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self.grid_no = QLineEdit(str(self.gird_no_val), self)
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self.gridlayout.addWidget(grid_noL, 0, 0)
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self.gridlayout.addWidget(self.grid_no, 0, 1)
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col_elecsU =QLabel('n', self)
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col_elecsL =QLabel('Electrod Columns:', self)
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self.col_elecs = QLineEdit(str(self.columns_val), self)
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self.gridlayout.addWidget(col_elecsL, 0, 0)
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self.gridlayout.addWidget(self.col_elecs, 0, 1)
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self.gridlayout.addWidget(col_elecsU, 0, 2)
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self.gridlayout.addWidget(col_elecsL, 1, 0)
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self.gridlayout.addWidget(self.col_elecs, 1, 1)
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self.gridlayout.addWidget(col_elecsU, 1, 2)
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row_elecsU = QLabel('n', self)
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row_elecsL = QLabel('Electrod Rows:', self)
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self.row_elecs = QLineEdit(str(self.rows_val), self)
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self.gridlayout.addWidget(row_elecsL, 1, 0)
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self.gridlayout.addWidget(self.row_elecs, 1, 1)
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self.gridlayout.addWidget(row_elecsU, 1, 2)
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self.gridlayout.addWidget(row_elecsL, 2, 0)
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self.gridlayout.addWidget(self.row_elecs, 2, 1)
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self.gridlayout.addWidget(row_elecsU, 2, 2)
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col_spaceU = QLabel('cm', self)
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col_spaceL = QLabel('Column spacing:', self)
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self.col_space = QLineEdit(str(self.col_dist_val), self)
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self.gridlayout.addWidget(col_spaceL, 2, 0)
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self.gridlayout.addWidget(self.col_space, 2, 1)
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self.gridlayout.addWidget(col_spaceU, 2, 2)
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self.gridlayout.addWidget(col_spaceL, 3, 0)
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self.gridlayout.addWidget(self.col_space, 3, 1)
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self.gridlayout.addWidget(col_spaceU, 3, 2)
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row_spaceU = QLabel('cm', self)
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row_spaceL = QLabel('Row spacing:', self)
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self.row_space = QLineEdit(str(self.row_dist_val), self)
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self.gridlayout.addWidget(row_spaceL, 3, 0)
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self.gridlayout.addWidget(self.row_space, 3, 1)
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self.gridlayout.addWidget(row_spaceU, 3, 2)
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self.gridlayout.addWidget(row_spaceL, 4, 0)
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self.gridlayout.addWidget(self.row_space, 4, 1)
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self.gridlayout.addWidget(row_spaceU, 4, 2)
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channel_offsetU = QLabel('n', self)
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channel_offsetL = QLabel('Channel offset:', self)
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self.channel_offset = QLineEdit(str(self.channel_offset_val), self)
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self.gridlayout.addWidget(channel_offsetL, 4, 0)
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self.gridlayout.addWidget(self.channel_offset, 4, 1)
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self.gridlayout.addWidget(channel_offsetU, 4, 2)
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# channel_offsetU = QLabel('n', self)
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# channel_offsetL = QLabel('Channel offset:', self)
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# self.channel_offset = QLineEdit(str(self.channel_offset_val), self)
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# self.gridlayout.addWidget(channel_offsetL, 4, 0)
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# self.gridlayout.addWidget(self.channel_offset, 4, 1)
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# self.gridlayout.addWidget(channel_offsetU, 4, 2)
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elec_typeL = QLabel('Electrode Type:', self)
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self.elec_type = QLineEdit(self.elec_type_val, self)
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@ -99,7 +104,7 @@ class Grid_tab(QWidget):
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self.gridlayout.addWidget(water_depthU, 9, 2)
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space = QLabel('', self)
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self.gridlayout.addWidget(space, 10, 0)
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self.gridlayout.addWidget(space, 9, 0)
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class Hardware_settings_tab(QWidget):
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def __init__(self):
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@ -271,29 +276,29 @@ class Recording_settings(QWidget):
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self.gridlayout.addWidget(experimenterL, 10, 0)
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self.gridlayout.addWidget(self.experimenter, 10, 1)
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DataTimeU = QLabel('ms', self)
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DataTimeL = QLabel('Data Time:', self)
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self.datatime = QLineEdit(str(self.datatime_val), self)
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self.gridlayout.addWidget(DataTimeL, 11, 0)
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self.gridlayout.addWidget(self.datatime, 11, 1)
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self.gridlayout.addWidget(DataTimeU, 11, 2)
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DataIntervalU = QLabel('ms', self)
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DataIntervalL = QLabel('Data Interval:', self)
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self.datainterval = QLineEdit(str(self.datainterval_val), self)
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self.gridlayout.addWidget(DataIntervalL, 12, 0)
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self.gridlayout.addWidget(self.datainterval, 12, 1)
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self.gridlayout.addWidget(DataIntervalU, 12, 2)
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BufferTimeU = QLabel('s', self)
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BufferTimeL = QLabel('Buffer Time:', self)
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self.buffertime = QLineEdit(str(self.buffertime_val), self)
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self.gridlayout.addWidget(BufferTimeL, 13, 0)
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self.gridlayout.addWidget(self.buffertime, 13, 1)
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self.gridlayout.addWidget(BufferTimeU, 13, 2)
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# DataTimeU = QLabel('ms', self)
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# DataTimeL = QLabel('Data Time:', self)
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# self.datatime = QLineEdit(str(self.datatime_val), self)
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# self.gridlayout.addWidget(DataTimeL, 11, 0)
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# self.gridlayout.addWidget(self.datatime, 11, 1)
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# self.gridlayout.addWidget(DataTimeU, 11, 2)
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#
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# DataIntervalU = QLabel('ms', self)
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# DataIntervalL = QLabel('Data Interval:', self)
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# self.datainterval = QLineEdit(str(self.datainterval_val), self)
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# self.gridlayout.addWidget(DataIntervalL, 12, 0)
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# self.gridlayout.addWidget(self.datainterval, 12, 1)
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# self.gridlayout.addWidget(DataIntervalU, 12, 2)
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#
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# BufferTimeU = QLabel('s', self)
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# BufferTimeL = QLabel('Buffer Time:', self)
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# self.buffertime = QLineEdit(str(self.buffertime_val), self)
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# self.gridlayout.addWidget(BufferTimeL, 13, 0)
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# self.gridlayout.addWidget(self.buffertime, 13, 1)
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# self.gridlayout.addWidget(BufferTimeU, 13, 2)
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space = QLabel('', self)
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self.gridlayout.addWidget(space, 14, 0)
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self.gridlayout.addWidget(space, 11, 0)
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class MainWindow(QTabWidget):
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@ -346,6 +351,7 @@ class MainWindow(QTabWidget):
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self.show()
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def init_vars(self):
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self.Grid.grid_no_val = 1
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self.Grid.columns_val = 8
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self.Grid.rows_val = 8
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self.Grid.col_dist_val = 50
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@ -377,9 +383,9 @@ class MainWindow(QTabWidget):
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self.Recording.water_oxy_val = 0
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self.Recording.comment_val = '~'
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self.Recording.experimenter_val = 'T. Raab et al. :)'
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self.Recording.datatime_val = 100
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self.Recording.datainterval_val = 1000
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self.Recording.buffertime_val = 60
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# self.Recording.datatime_val = 100
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# self.Recording.datainterval_val = 1000
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# self.Recording.buffertime_val = 60
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def closeMe(self):
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quit()
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@ -389,8 +395,9 @@ class MainWindow(QTabWidget):
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cfg = f.readlines()
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for line in cfg:
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if 'Columns1' in line:
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if 'Gridno' in line:
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self.Grid.grid_no_val = int(line.split(':')[1].strip())
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elif 'Columns1' in line:
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self.Grid.columns_val = int(line.split(':')[1].strip())
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elif 'Rows1' in line:
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self.Grid.rows_val = int(line.split(':')[1].strip())
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@ -398,8 +405,8 @@ class MainWindow(QTabWidget):
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self.Grid.col_dist_val = float(line.split(':')[-1].strip().replace('cm', ''))
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elif "RowDistance1" in line:
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self.Grid.row_dist_val = float(line.split(':')[-1].strip().replace('cm', ''))
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elif "ChannelOffset1" in line:
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self.Grid.channel_offset_val = int(line.split(':')[-1].strip())
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# elif "ChannelOffset1" in line:
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# self.Grid.channel_offset_val = int(line.split(':')[-1].strip())
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elif "ElectrodeType1" in line:
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self.Grid.elec_type_val = line.split(':')[-1].strip()
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elif "RefElectrodeType1" in line:
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@ -450,12 +457,12 @@ class MainWindow(QTabWidget):
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self.Recording.comment_val = ':'.join(line.split(':')[1:]).strip()
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elif "Experimenter" in line:
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self.Recording.experimenter_val = ':'.join(line.split(':')[1:]).strip()
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elif "DataTime" in line:
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self.Recording.datatime_val = int(line.split(':')[-1].strip().replace('ms', ''))
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elif "DataInterval" in line:
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self.Recording.datainterval_val = int(line.split(':')[-1].strip().replace('ms', ''))
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elif "BufferTime" in line:
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self.Recording.buffertime_val = int(line.split(':')[-1].strip().replace('s', ''))
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# elif "DataTime" in line:
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# self.Recording.datatime_val = int(line.split(':')[-1].strip().replace('ms', ''))
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# elif "DataInterval" in line:
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# self.Recording.datainterval_val = int(line.split(':')[-1].strip().replace('ms', ''))
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# elif "BufferTime" in line:
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# self.Recording.buffertime_val = int(line.split(':')[-1].strip().replace('s', ''))
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else:
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continue
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