48 lines
2.3 KiB
YAML
Executable File
48 lines
2.3 KiB
YAML
Executable File
# Path setup ------------------------------------------------------------------
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dataroot: "../data/" # path to data
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outputdir: "../output/" # path to save plots to
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# Rolling window parameters ---------------------------------------------------
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window: 5 # rolling window length in seconds
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overlap: 1 # window overlap in seconds
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edge: 0.25 # window edge cufoffs to mitigate filter edge effects
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# Electrode iteration parameters ----------------------------------------------
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number_electrodes: 2 # number of electrodes to go over
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minimum_electrodes: 1 # mimumun number of electrodes a chirp must be on
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# Feature extraction parameters -----------------------------------------------
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search_df_lower: 20 # start searching this far above the baseline
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search_df_upper: 100 # stop searching this far above the baseline
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search_res: 1 # search window resolution
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default_search_freq: 60 # search here if no need for a search frequency
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minimal_bandwidth: 10 # minimal bandpass filter width for baseline
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search_bandwidth: 10 # minimal bandpass filter width for search frequency
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baseline_frequency_smoothing: 3 # instantaneous frequency smoothing
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# Feature processing parameters -----------------------------------------------
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baseline_frequency_peakheight: 5 # the min peak height of the baseline instfreq
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baseline_min_amplitude: 0.0001 # the minimal value of the baseline envelope
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baseline_envelope_cutoff: 25 # envelope estimation cutoff
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baseline_envelope_bandpass_lowf: 2 # envelope badpass lower cutoff
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baseline_envelope_bandpass_highf: 100 # envelope bandbass higher cutoff
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search_envelope_cutoff: 10 # search envelope estimation cufoff
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# Peak detecion parameters ----------------------------------------------------
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# baseline_prominence: 0.00005 # peak prominence threshold for baseline envelope
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# search_prominence: 0.000004 # peak prominence threshold for search envelope
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# frequency_prominence: 2 # peak prominence threshold for baseline freq
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baseline_prominence: 0.3 # peak prominence threshold for baseline envelope
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search_prominence: 0.3 # peak prominence threshold for search envelope
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frequency_prominence: 0.3 # peak prominence threshold for baseline freq
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# Classify events as chirps if they are less than this time apart
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chirp_window_threshold: 0.02
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