fix broken repo
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4f3f2f071b
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b098e5083a
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.gitignore
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1
.gitignore
vendored
@ -6,6 +6,7 @@ data
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env
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output
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trash
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.vscode
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# Mac Stuff
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*.DS_Store
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6
.vscode/settings.json
vendored
6
.vscode/settings.json
vendored
@ -1,6 +0,0 @@
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{
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"[python]": {
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"editor.defaultFormatter": "ms-python.black-formatter"
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},
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"python.formatting.provider": "none"
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}
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@ -726,8 +726,8 @@ def chirpdetection(datapath: str, plot: str, debug: str = "false") -> None:
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raw_time = np.arange(data.raw.shape[0]) / data.raw_rate
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# good chirp times for data: 2022-06-02-10_00
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# window_start_index = (3 * 60 * 60 + 6 * 60 + 43.5) * data.raw_rate
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# window_duration_index = 60 * data.raw_rate
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window_start_index = (3 * 60 * 60 + 6 * 60 + 43.5) * data.raw_rate
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window_duration_index = 60 * data.raw_rate
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# t0 = 0
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# dt = data.raw.shape[0]
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@ -1185,4 +1185,4 @@ if __name__ == "__main__":
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# datapath = "/home/weygoldt/Data/uni/efishdata/2016-colombia/fishgrid/2016-04-09-22_25/"
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# datapath = "/home/weygoldt/Data/uni/chirpdetection/GP2023_chirp_detection/data/mount_data/2020-03-13-10_00/"
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datapath = "../data/2022-06-02-10_00/"
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chirpdetection(datapath, plot="show", debug="false")
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chirpdetection(datapath, plot="save", debug="false")
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@ -15,8 +15,8 @@ def PlotStyle() -> None:
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# colors
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black = "#111116"
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white = "#111116"
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gray = "#111116"
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white = "#e0e4f7"
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gray = "#6c6e7d"
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blue = "#89b4fa"
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sapphire = "#74c7ec"
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sky = "#89dceb"
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@ -217,10 +217,10 @@ def PlotStyle() -> None:
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SMALL_SIZE = 12
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MEDIUM_SIZE = 14
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BIGGER_SIZE = 16
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black = "#e0e4f7"
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white = "#111116"
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# gray = "#6c6e7d"
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# dark_gray = "#2a2a32"
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black = "#111116"
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white = "#e0e4f7"
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gray = "#6c6e7d"
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dark_gray = "#2a2a32"
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# rcparams
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plt.rc("font", size=MEDIUM_SIZE) # controls default text sizes
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@ -231,7 +231,7 @@ def PlotStyle() -> None:
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plt.rc("legend", fontsize=SMALL_SIZE) # legend fontsize
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plt.rc("figure", titlesize=BIGGER_SIZE) # fontsize of the figure title
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plt.rcParams["image.cmap"] = "cmo.haline"
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plt.rcParams["image.cmap"] = "cmo.thermal"
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plt.rcParams["axes.xmargin"] = 0.05
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plt.rcParams["axes.ymargin"] = 0.1
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plt.rcParams["axes.titlelocation"] = "left"
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@ -251,46 +251,46 @@ def PlotStyle() -> None:
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# plt.rcParams["font.sans-serif"] = "Helvetica Now Text"
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# dark mode modifications
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# plt.rcParams["boxplot.flierprops.color"] = white
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# plt.rcParams["boxplot.flierprops.markeredgecolor"] = gray
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# plt.rcParams["boxplot.boxprops.color"] = gray
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# plt.rcParams["boxplot.whiskerprops.color"] = gray
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# plt.rcParams["boxplot.capprops.color"] = gray
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# plt.rcParams["boxplot.medianprops.color"] = black
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# plt.rcParams["text.color"] = white
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# plt.rcParams["axes.facecolor"] = black # axes background color
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# plt.rcParams["axes.edgecolor"] = white # axes edge color
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# # plt.rcParams["axes.grid"] = True # display grid or not
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# # plt.rcParams["axes.grid.axis"] = "y" # which axis the grid is applied to
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# plt.rcParams["axes.labelcolor"] = white
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# plt.rcParams["axes.axisbelow"] = True # draw axis gridlines and ticks:
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# plt.rcParams["axes.spines.left"] = True # display axis spines
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# plt.rcParams["axes.spines.bottom"] = True
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# plt.rcParams["axes.spines.top"] = False
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# plt.rcParams["axes.spines.right"] = False
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# plt.rcParams["axes.prop_cycle"] = cycler(
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# "color",
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# [
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# "#b4befe",
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# "#89b4fa",
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# "#74c7ec",
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# "#89dceb",
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# "#94e2d5",
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# "#a6e3a1",
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# "#f9e2af",
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# "#fab387",
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# "#eba0ac",
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# "#f38ba8",
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# "#cba6f7",
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# "#f5c2e7",
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# ],
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# )
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# plt.rcParams["xtick.color"] = white # color of the ticks
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# plt.rcParams["ytick.color"] = white # color of the ticks
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# plt.rcParams["grid.color"] = white # grid color
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# plt.rcParams["figure.facecolor"] = black # figure face color
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# plt.rcParams["figure.edgecolor"] = black # figure edge color
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# plt.rcParams["savefig.facecolor"] = black # figure face color when saving
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plt.rcParams["boxplot.flierprops.color"] = white
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plt.rcParams["boxplot.flierprops.markeredgecolor"] = gray
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plt.rcParams["boxplot.boxprops.color"] = gray
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plt.rcParams["boxplot.whiskerprops.color"] = gray
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plt.rcParams["boxplot.capprops.color"] = gray
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plt.rcParams["boxplot.medianprops.color"] = black
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plt.rcParams["text.color"] = white
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plt.rcParams["axes.facecolor"] = black # axes background color
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plt.rcParams["axes.edgecolor"] = white # axes edge color
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# plt.rcParams["axes.grid"] = True # display grid or not
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# plt.rcParams["axes.grid.axis"] = "y" # which axis the grid is applied to
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plt.rcParams["axes.labelcolor"] = white
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plt.rcParams["axes.axisbelow"] = True # draw axis gridlines and ticks:
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plt.rcParams["axes.spines.left"] = True # display axis spines
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plt.rcParams["axes.spines.bottom"] = True
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plt.rcParams["axes.spines.top"] = False
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plt.rcParams["axes.spines.right"] = False
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plt.rcParams["axes.prop_cycle"] = cycler(
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"color",
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[
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"#b4befe",
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"#89b4fa",
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"#74c7ec",
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"#89dceb",
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"#94e2d5",
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"#a6e3a1",
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"#f9e2af",
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"#fab387",
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"#eba0ac",
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"#f38ba8",
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"#cba6f7",
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"#f5c2e7",
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],
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)
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plt.rcParams["xtick.color"] = white # color of the ticks
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plt.rcParams["ytick.color"] = white # color of the ticks
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plt.rcParams["grid.color"] = white # grid color
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plt.rcParams["figure.facecolor"] = black # figure face color
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plt.rcParams["figure.edgecolor"] = black # figure edge color
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plt.rcParams["savefig.facecolor"] = black # figure face color when saving
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return style
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@ -15,8 +15,8 @@ def PlotStyle() -> None:
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# colors
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black = "#111116"
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white = "#e0e4f7"
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gray = "#6c6e7d"
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white = "#111116"
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gray = "#111116"
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blue = "#89b4fa"
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sapphire = "#74c7ec"
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sky = "#89dceb"
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@ -217,10 +217,10 @@ def PlotStyle() -> None:
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SMALL_SIZE = 12
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MEDIUM_SIZE = 14
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BIGGER_SIZE = 16
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black = "#111116"
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white = "#e0e4f7"
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gray = "#6c6e7d"
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dark_gray = "#2a2a32"
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black = "#e0e4f7"
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white = "#111116"
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# gray = "#6c6e7d"
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# dark_gray = "#2a2a32"
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# rcparams
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plt.rc("font", size=MEDIUM_SIZE) # controls default text sizes
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@ -231,7 +231,7 @@ def PlotStyle() -> None:
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plt.rc("legend", fontsize=SMALL_SIZE) # legend fontsize
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plt.rc("figure", titlesize=BIGGER_SIZE) # fontsize of the figure title
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plt.rcParams["image.cmap"] = "cmo.thermal"
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plt.rcParams["image.cmap"] = "cmo.haline"
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plt.rcParams["axes.xmargin"] = 0.05
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plt.rcParams["axes.ymargin"] = 0.1
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plt.rcParams["axes.titlelocation"] = "left"
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@ -251,46 +251,46 @@ def PlotStyle() -> None:
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# plt.rcParams["font.sans-serif"] = "Helvetica Now Text"
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# dark mode modifications
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plt.rcParams["boxplot.flierprops.color"] = white
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plt.rcParams["boxplot.flierprops.markeredgecolor"] = gray
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plt.rcParams["boxplot.boxprops.color"] = gray
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plt.rcParams["boxplot.whiskerprops.color"] = gray
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plt.rcParams["boxplot.capprops.color"] = gray
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plt.rcParams["boxplot.medianprops.color"] = black
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plt.rcParams["text.color"] = white
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plt.rcParams["axes.facecolor"] = black # axes background color
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plt.rcParams["axes.edgecolor"] = white # axes edge color
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# plt.rcParams["axes.grid"] = True # display grid or not
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# plt.rcParams["axes.grid.axis"] = "y" # which axis the grid is applied to
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plt.rcParams["axes.labelcolor"] = white
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plt.rcParams["axes.axisbelow"] = True # draw axis gridlines and ticks:
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plt.rcParams["axes.spines.left"] = True # display axis spines
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plt.rcParams["axes.spines.bottom"] = True
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plt.rcParams["axes.spines.top"] = False
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plt.rcParams["axes.spines.right"] = False
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plt.rcParams["axes.prop_cycle"] = cycler(
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"color",
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[
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"#b4befe",
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"#89b4fa",
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"#74c7ec",
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"#89dceb",
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"#94e2d5",
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"#a6e3a1",
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"#f9e2af",
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"#fab387",
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"#eba0ac",
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"#f38ba8",
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"#cba6f7",
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"#f5c2e7",
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],
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)
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plt.rcParams["xtick.color"] = white # color of the ticks
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plt.rcParams["ytick.color"] = white # color of the ticks
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plt.rcParams["grid.color"] = white # grid color
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plt.rcParams["figure.facecolor"] = black # figure face color
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plt.rcParams["figure.edgecolor"] = black # figure edge color
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plt.rcParams["savefig.facecolor"] = black # figure face color when saving
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# plt.rcParams["boxplot.flierprops.color"] = white
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# plt.rcParams["boxplot.flierprops.markeredgecolor"] = gray
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# plt.rcParams["boxplot.boxprops.color"] = gray
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# plt.rcParams["boxplot.whiskerprops.color"] = gray
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# plt.rcParams["boxplot.capprops.color"] = gray
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# plt.rcParams["boxplot.medianprops.color"] = black
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# plt.rcParams["text.color"] = white
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# plt.rcParams["axes.facecolor"] = black # axes background color
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# plt.rcParams["axes.edgecolor"] = white # axes edge color
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# # plt.rcParams["axes.grid"] = True # display grid or not
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# # plt.rcParams["axes.grid.axis"] = "y" # which axis the grid is applied to
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# plt.rcParams["axes.labelcolor"] = white
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# plt.rcParams["axes.axisbelow"] = True # draw axis gridlines and ticks:
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# plt.rcParams["axes.spines.left"] = True # display axis spines
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# plt.rcParams["axes.spines.bottom"] = True
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# plt.rcParams["axes.spines.top"] = False
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# plt.rcParams["axes.spines.right"] = False
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# plt.rcParams["axes.prop_cycle"] = cycler(
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# "color",
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# [
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# "#b4befe",
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# "#89b4fa",
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# "#74c7ec",
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# "#89dceb",
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# "#94e2d5",
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# "#a6e3a1",
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# "#f9e2af",
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# "#fab387",
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# "#eba0ac",
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# "#f38ba8",
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# "#cba6f7",
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# "#f5c2e7",
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# ],
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# )
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# plt.rcParams["xtick.color"] = white # color of the ticks
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# plt.rcParams["ytick.color"] = white # color of the ticks
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# plt.rcParams["grid.color"] = white # grid color
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# plt.rcParams["figure.facecolor"] = black # figure face color
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# plt.rcParams["figure.edgecolor"] = black # figure edge color
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# plt.rcParams["savefig.facecolor"] = black # figure face color when saving
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return style
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