diff --git a/code/chirpdetection.py b/code/chirpdetection.py index cde1d9a..0fc88a6 100644 --- a/code/chirpdetection.py +++ b/code/chirpdetection.py @@ -143,6 +143,13 @@ def main(datapath: str) -> None: data = LoadData(datapath) + # ititialize data collection + baseline_ts = [] + search_ts = [] + freq_ts = [] + fish_ids = [] + electrodes = [] + # load wavetracker files # time = np.load(datapath + "times.npy", allow_pickle=True) # freq = np.load(datapath + "fund_v.npy", allow_pickle=True) @@ -456,6 +463,14 @@ def main(datapath: str) -> None: inst_freq_peaks, _ = find_peaks( np.abs(inst_freq_filtered), prominence=prominence) + # SAVE DATA ---------------------------------------------------- + + baseline_ts.append(time_oi[baseline_peaks].tolist()) + search_ts.append(time_oi[search_peaks].tolist()) + freq_ts.append(baseline_freq_time[inst_freq_peaks].tolist()) + fish_ids.append(track_id) + electrodes.append(electrode) + embed() # PLOT ------------------------------------------------------------ # plot spectrogram