added function all_coming_toghether

code/useful_functions.py

@@ -6,6 +6,67 @@ import rlxnix as rlx
 from IPython import embed
 from scipy.signal import welch
 
+def all_coming_together(freq_array, power_array, points_list, categories, num_harmonics_list, colors, delta=2.5, threshold=0.5):
+    """
+    Process a list of points, calculating integrals, checking validity, and preparing harmonics for valid points.
+
+    Parameters
+    ----------
+    freq_array : np.array
+        Array of frequencies corresponding to the power values.
+    power_array : np.array
+        Array of power spectral density values.
+    points_list : list
+        List of harmonic frequency points to process.
+    categories : list
+        List of corresponding categories for each point.
+    num_harmonics_list : list
+        List of the number of harmonics for each point.
+    colors : list
+        List of colors corresponding to each point's category.
+    delta : float, optional
+        Radius of the range for integration around each point (default is 2.5).
+    threshold : float, optional
+        Threshold value to compare integrals with local mean (default is 0.5).
+
+    Returns
+    -------
+    valid_points : list
+        A list of valid points with their harmonics.
+    color_mapping : dict
+        A dictionary mapping categories to corresponding colors.
+    category_harmonics : dict
+        A mapping of categories to their harmonic frequencies.
+    messages : list
+        A list of messages for each point, stating whether it was valid or not.
+    """
+    valid_points = []
+    color_mapping = {}
+    category_harmonics = {}
+    messages = []
+
+    for i, point in enumerate(points_list):
+        category = categories[i]
+        num_harmonics = num_harmonics_list[i]
+        color = colors[i]
+        
+        # Step 1: Calculate the integral for the point
+        integral, local_mean, _ = calculate_integral(freq_array, power_array, point, delta)
+        
+        # Step 2: Check if the point is valid
+        valid = valid_integrals(integral, local_mean, point, threshold)
+        if valid:
+            # Step 3: Prepare harmonics if the point is valid
+            harmonics, color_map, category_harm = prepare_harmonic(point, category, num_harmonics, color)
+            valid_points.append((point, harmonics))
+            color_mapping.update(color_map)
+            category_harmonics.update(category_harm)
+            messages.append(f"The point {point} is valid.")
+        else:
+            messages.append(f"The point {point} is not valid.")
+    
+    return valid_points, color_mapping, category_harmonics, messages
+
 def AM(EODf, stimulus):
     """
     Calculates the Amplitude Modulation and Nyquist frequency
@@ -215,38 +276,36 @@ def power_spectrum(stimulus):
     freq, power = welch(rate, fs = 1/dt, nperseg = 2**16, noverlap = 2**15)
     return freq, power
 
-def prepare_harmonics(frequencies, categories, num_harmonics, colors):
+def prepare_harmonic(frequency, category, num_harmonics, color):
     """
-    Prepare harmonic frequencies and assign colors based on categories.
+    Prepare harmonic frequencies and assign color based on category for a single point.
 
     Parameters
     ----------
-    frequencies : list
-        Base frequencies to generate harmonics.
-    categories : list
-        Corresponding categories for the base frequencies.
-    num_harmonics : list
-        Number of harmonics for each base frequency.
-    colors : list
-        List of colors corresponding to the categories.
+    frequency : float
+        Base frequency to generate harmonics.
+    category : str
+        Corresponding category for the base frequency.
+    num_harmonics : int
+        Number of harmonics for the base frequency.
+    color : str
+        Color corresponding to the category.
 
     Returns
     -------
-    points : list
-        A flat list of harmonic frequencies.
+    harmonics : list
+        A list of harmonic frequencies.
     color_mapping : dict
-        A dictionary mapping each category to its corresponding color.
-    points_categories : dict
-        A mapping of categories to their harmonic frequencies.
+        A dictionary mapping the category to its corresponding color.
+    category_harmonics : dict
+        A mapping of the category to its harmonic frequencies.
     """
-    points_categories = {}
-    for idx, (freq, category) in enumerate(zip(frequencies, categories)):
-        points_categories[category] = [freq * (i + 1) for i in range(num_harmonics[idx])]
+    harmonics = [frequency * (i + 1) for i in range(num_harmonics)]
     
-    points = [p for harmonics in points_categories.values() for p in harmonics]
-    color_mapping = {category: colors[idx] for idx, category in enumerate(categories)}
+    color_mapping = {category: color}
+    category_harmonics = {category: harmonics}
 
-    return points, color_mapping, points_categories
+    return harmonics, color_mapping, category_harmonics
 
 def remove_poor(files):
     """