diff --git a/tubingen/code/position_heatmap.py b/tubingen/code/position_heatmap.py index 939d6a5..5243a27 100644 --- a/tubingen/code/position_heatmap.py +++ b/tubingen/code/position_heatmap.py @@ -8,7 +8,7 @@ import os from IPython import embed import pycircstat as stats -from tracking_result import TrackingResult +from etrack import TrackingResult fish_color = {'2019lepto03': {'main': 'red', 'dark': 'darkred', 'light': 'indianred'}, '2020lepto20': {'main': 'orange','dark': 'sienna', 'light': 'sandybrown'}, @@ -169,6 +169,8 @@ if __name__ == "__main__": if len(all_joined) > 0: attracted, repelled, interacting, avoiding = characterize_behavior_all(np.array(all_joined)) + #attracted, repelled, interacting, avoiding = characterize_behavior(all) + results.append({"subject": subject, "light_condition": light, "stimulus": stim, "attracted": attracted, "repelled": repelled, "interacting": interacting, "avoiding": avoiding}) plot_angles(np.array(all_joined), stim, light, ax=axis, color=fish_color[subject]["dark"]) @@ -178,6 +180,7 @@ if __name__ == "__main__": fig.savefig("%s_preferred_angles.pdf" % subject) plt.close() results_df = pd.DataFrame(results) + results_df.to_csv("behavior_results_simple.csv", sep=";") embed() # does the fish go to the previous stimulus location? \ No newline at end of file