[test] fix import
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				| @ -1,10 +1,9 @@ | ||||
| import nixio as nix | ||||
| import lif | ||||
| import os | ||||
| import nixview.test.lif as lif | ||||
| import numpy as np | ||||
| import matplotlib.pyplot as plt | ||||
| import matplotlib.mlab as mlab | ||||
| from PIL import Image as img | ||||
| from IPython import embed | ||||
| 
 | ||||
| def bivariate_normal(X, Y, sigmax=1.0, sigmay=1.0, | ||||
|                      mux=0.0, muy=0.0, sigmaxy=0.0): | ||||
| @ -70,6 +69,7 @@ def create_1d_sampled(f, b): | ||||
| def create_2d(f, b, trials=10): | ||||
|     # create multiple responses of a lif model neuron | ||||
|     voltages = [] | ||||
|     time = None | ||||
|     for t in range(trials): | ||||
|         time, voltage, _ = fake_neuron() | ||||
|         voltages.append(voltage) | ||||
| @ -78,7 +78,7 @@ def create_2d(f, b, trials=10): | ||||
| 
 | ||||
|     da = b.create_data_array("membrane voltages", "nix.regular_sampled.series", | ||||
|                              dtype=nix.DataType.Double, data=voltages) | ||||
|     d = da.append_sampled_dimension(time[1]-time[0]) | ||||
|     d = da.append_sampled_dimension(time[1] - time[0]) | ||||
|     d.label = "time" | ||||
|     d.unit = "s" | ||||
|     da.label = "voltage" | ||||
| @ -103,7 +103,9 @@ def create_2d(f, b, trials=10): | ||||
| 
 | ||||
| def create_3d(f, b): | ||||
|     # taken from nix tutorial | ||||
|     image = img.open('lena.bmp') | ||||
|     path = os.path.realpath(__file__).split(os.sep)[:-1] | ||||
|     path.append("lena.bmp") | ||||
|     image = img.open(os.sep.join(path)) | ||||
|     img_data = np.array(image) | ||||
|     channels = list(image.mode) | ||||
|     data = b.create_data_array("lena", "nix.image.rgb", data=img_data) | ||||
|  | ||||
| @ -8,7 +8,7 @@ test_file = os.path.join(".", "nix_test.h5") | ||||
| def setup(): | ||||
|     if not os.path.exists(test_file): | ||||
|         from nixview.test.create_test_file import create_test_file | ||||
|         create_test_file() | ||||
|         create_test_file(test_file) | ||||
|     fhandler = file_handler.FileHandler() | ||||
|     yield fhandler | ||||
|     fhandler.close() | ||||
|  | ||||
| @ -9,7 +9,7 @@ test_file = os.path.join(".", "nix_test.h5") | ||||
| def app(qtbot): | ||||
|     if not os.path.exists(test_file): | ||||
|         from nixview.test.create_test_file import create_test_file | ||||
|         create_test_file() | ||||
|         create_test_file(test_file) | ||||
|     test_nv = NixView() | ||||
|     qtbot.addWidget(test_nv) | ||||
|     yield test_nv | ||||
|  | ||||
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