[descriptors] extracted to separate file
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@ -2,96 +2,8 @@ import os
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import nixio as nix
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import nixio as nix
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import numpy as np
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import numpy as np
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from enum import Enum
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from enum import Enum
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import datetime as dt
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from numpy.core.defchararray import not_equal
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from nixview.constants import io_chunksize as chunksize
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class ItemDescriptor():
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def __init__(self, name=None, id=None, type=None, value=None, definition=None, block_id=None, entity_type=None, shape=None, metadata=None, data_type=None, source_id=None, created_at=None, updated_at=None) -> None:
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super().__init__()
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self.name = name
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self.type = type
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self.id = id
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self.block_id= block_id
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self.definition = definition
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self.value = value
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self.entity_type = entity_type
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self.data_type = data_type
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self.shape = shape
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self.metadata_id = metadata
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self.source_id = source_id
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self.created_at = None
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self.updated_at = None
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def to_html(self):
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descr = "<html><h4>%s: %s</h4>" % (self.type, self.name)
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descr += "<ol style='list-style-type:none'>"
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descr += "<li><small><b>id:</b> %s</small></li>" % (self.id)
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descr += "<li><small><b>entity type:</b> %s</small></li>" % (self.entity_type.value)
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descr += "<li><small><b>data type:</b> %s</small></li>" % (str(self.data_type))
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descr += "<li><small><b>data shape:</b> %s</small></li>" % (str(self.shape))
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descr += "<hr>"
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descr += "<p><small><b>definition:</b> %s</small></p>" % (self.definition)
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descr += "<hr>"
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descr += "<li><small><b>metadata id:</b> %s</small></li>" % (self.metadata_id)
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descr += "<li><small><b>source id:</b> %s</small></li>" % (self.source_id)
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descr += "<hr>"
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descr += "<li><small><b>created at:</b> %s</small></li>" % (str(dt.datetime.fromtimestamp(self.created_at)) if self.created_at else "")
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descr += "<li><small><b>updated at:</b> %s</small></li>" % (str(dt.datetime.fromtimestamp(self.updated_at)) if self.updated_at else "")
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descr += "</ol>"
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descr += "</html>"
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return descr
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class FileDescriptor():
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def __init__(self, filename, format, version, created_at, updated_at, size) -> None:
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super().__init__()
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self.name = filename
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self.size = None
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self.format = format
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self.version = version
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self.created_at = created_at
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self.updated_at = updated_at
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self.size = size
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self.block_count = 0
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self.data_array_count = 0
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self.tag_count = 0
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self.group_count = 0
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self.data_frame_count = 0
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def toHtml(self):
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def namAndPath(filename):
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parts = filename.split(os.sep)
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name = parts[-1]
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path = ""
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if len(parts) > 1:
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path = os.sep.join(parts[:-1])
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return name, path
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name, path = namAndPath(self.name)
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descr = "<html><h4>%s</h4>" % name
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descr += "<ol style='list-style-type:none'>"
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descr += "<li><small><b>location:</b> %s</small></li>" % (path if len(path) > 1 else ".")
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descr += "<li><small><b>format:</b> %s</small></li>" % (self.format)
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descr += "<li><small><b>nix format version:</b> %s</small></li>" % (str(self.version))
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descr += "<li><small><b>file size:</b> %.2f MB</small></li>" % (self.size)
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descr += "<hr>"
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descr += "<li>File contents</li>"
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descr += "<li><small><b>blocks:</b> %i</small></li>" % self.block_count
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descr += "<li><small><b>groups:</b> %i</small></li>" % self.group_count
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descr += "<li><small><b>data arrays:</b> %i</small></li>" % self.data_array_count
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descr += "<li><small><b>data frames:</b> %i</small></li>" % self.data_frame_count
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descr += "<li><small><b>tags:</b> %i</small></li>" % self.tag_count
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descr += "<hr>"
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descr += "<li><small><b>created at:</b> %s</small></li>" % (str(dt.datetime.fromtimestamp(self.created_at)))
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descr += "<li><small><b>updated at:</b> %s</small></li>" % (str(dt.datetime.fromtimestamp(self.updated_at)))
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descr += "</ol>"
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descr += "</html>"
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return descr
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from nixview.util.descriptors import FileDescriptor, ItemDescriptor
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class NodeType(Enum):
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class NodeType(Enum):
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Root = "root"
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Root = "root"
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90
nixview/util/descriptors.py
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90
nixview/util/descriptors.py
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@ -0,0 +1,90 @@
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import os
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import datetime as dt
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class ItemDescriptor():
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def __init__(self, name=None, id=None, type=None, value=None, definition=None, block_id=None, entity_type=None, shape=None, metadata=None, data_type=None, source_id=None, created_at=None, updated_at=None) -> None:
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super().__init__()
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self.name = name
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self.type = type
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self.id = id
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self.block_id= block_id
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self.definition = definition
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self.value = value
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self.entity_type = entity_type
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self.data_type = data_type
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self.shape = shape
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self.metadata_id = metadata
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self.source_id = source_id
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self.created_at = None
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self.updated_at = None
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def to_html(self):
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descr = "<html><h4>%s: %s</h4>" % (self.type, self.name)
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descr += "<ol style='list-style-type:none'>"
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descr += "<li><small><b>id:</b> %s</small></li>" % (self.id)
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descr += "<li><small><b>entity type:</b> %s</small></li>" % (self.entity_type.value)
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descr += "<li><small><b>data type:</b> %s</small></li>" % (str(self.data_type))
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descr += "<li><small><b>data shape:</b> %s</small></li>" % (str(self.shape))
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descr += "<hr>"
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descr += "<p><small><b>definition:</b> %s</small></p>" % (self.definition)
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descr += "<hr>"
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descr += "<li><small><b>metadata id:</b> %s</small></li>" % (self.metadata_id)
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descr += "<li><small><b>source id:</b> %s</small></li>" % (self.source_id)
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descr += "<hr>"
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descr += "<li><small><b>created at:</b> %s</small></li>" % (str(dt.datetime.fromtimestamp(self.created_at)) if self.created_at else "")
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descr += "<li><small><b>updated at:</b> %s</small></li>" % (str(dt.datetime.fromtimestamp(self.updated_at)) if self.updated_at else "")
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descr += "</ol>"
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descr += "</html>"
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return descr
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def __str__(self) -> str:
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return "Entity: %s, id: %s, type: %s " % (self.name, self.id, self.entity_type)
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class FileDescriptor():
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def __init__(self, filename, format, version, created_at, updated_at, size) -> None:
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super().__init__()
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self.name = filename
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self.size = None
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self.format = format
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self.version = version
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self.created_at = created_at
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self.updated_at = updated_at
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self.size = size
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self.block_count = 0
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self.data_array_count = 0
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self.tag_count = 0
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self.group_count = 0
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self.data_frame_count = 0
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def toHtml(self):
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def namAndPath(filename):
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parts = filename.split(os.sep)
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name = parts[-1]
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path = ""
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if len(parts) > 1:
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path = os.sep.join(parts[:-1])
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return name, path
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name, path = namAndPath(self.name)
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descr = "<html><h4>%s</h4>" % name
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descr += "<ol style='list-style-type:none'>"
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descr += "<li><small><b>location:</b> %s</small></li>" % (path if len(path) > 1 else ".")
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descr += "<li><small><b>format:</b> %s</small></li>" % (self.format)
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descr += "<li><small><b>nix format version:</b> %s</small></li>" % (str(self.version))
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descr += "<li><small><b>file size:</b> %.2f MB</small></li>" % (self.size)
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descr += "<hr>"
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descr += "<li>File contents</li>"
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descr += "<li><small><b>blocks:</b> %i</small></li>" % self.block_count
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descr += "<li><small><b>groups:</b> %i</small></li>" % self.group_count
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descr += "<li><small><b>data arrays:</b> %i</small></li>" % self.data_array_count
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descr += "<li><small><b>data frames:</b> %i</small></li>" % self.data_frame_count
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descr += "<li><small><b>tags:</b> %i</small></li>" % self.tag_count
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descr += "<hr>"
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descr += "<li><small><b>created at:</b> %s</small></li>" % (str(dt.datetime.fromtimestamp(self.created_at)))
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descr += "<li><small><b>updated at:</b> %s</small></li>" % (str(dt.datetime.fromtimestamp(self.updated_at)))
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descr += "</ol>"
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descr += "</html>"
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return descr
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