fishbook/docs/index.md

How to use the fish book

Requirements

• Python 3.5+ only, no python 2
• datajoint to connect to the database and to map python objects to table entries.
• nixio to read the relacs-flavored nix files during import or later during data retrieval.

Installation

1. clone the repository

>> git clone https://whale.am28.uni-tuebingen.de/git/jgrewe/fishbook.git 

2. installation When installing for development: install for the current user, install as "editable":

>> cd fishbook
>> pip3 install fishbook -e --user

When installing for use:

>> pip3 install fishbook --user
# or
>> sudo pip3 install fishbook

3. connecting to the database

   Suppose that you intend to work on a project named foo use the terminal to navigate to the project directory: cd foo