jgrewe/fishbook
2
1
Fork 1
Code Issues 3 Pull Requests Releases Wiki Activity

[fishbook] add _tuple property that returns a copy of the db tuple

Browse Source
This commit is contained in:
Jan Grewe 2019-10-02 18:09:37 +02:00
parent 77c0460ca9
commit d21c75cc7f
1 changed files with 31 additions and 0 deletions
Show Stats Download Patch File Download Diff File Expand all files Collapse all files

31
fishbook/fishbook.py
View File

@ -84,6 +84,10 @@ class Cell:
str += "Cell: %s \t type: %s\n"%(self.id, self.type) str += "Cell: %s \t type: %s\n"%(self.id, self.type)
return str return str
@property
def _tuple(self):
return self.__tuple.copy()
class Dataset: class Dataset:
def __init__(self, dataset_id=None, tuple=None): def __init__(self, dataset_id=None, tuple=None):
@ -187,6 +191,10 @@ class Dataset:
break break
self.__samplerate = 1000. / float(si) self.__samplerate = 1000. / float(si)
@property
def _tuple(self):
return self.__tuple.copy()
class RePro: class RePro:
def __init__(self, repro_id=None, tuple=None): def __init__(self, repro_id=None, tuple=None):
@ -276,6 +284,10 @@ class RePro:
repros = repros & p repros = repros & p
return [RePro(tuple=r) for r in repros] return [RePro(tuple=r) for r in repros]
@property
def _tuple(self):
return self.__tuple.copy()
class Stimulus: class Stimulus:
def __init__(self, stimulus_id=None, tuple=None): def __init__(self, stimulus_id=None, tuple=None):
@ -299,6 +311,21 @@ class Stimulus:
def settings(self): def settings(self):
return _safe_get_val(self.__tuple, "settings", "") return _safe_get_val(self.__tuple, "settings", "")
@property
def _tuple(self):
return self.__tuple.copy()
@staticmethod
def find(cell_id=None, repro_id=None, settings=None):
stims = Stimuli & True
if cell_id:
stims = stims & "cell_id = '{0:s}'".format(cell_id)
if repro_id:
stims = stims & "repro_id = '{0:s}'".format(repro_id)
if settings:
stims = stims & "settings like '%{0:s}%'".format(settings)
return [Stimulus(tuple=s) for s in stims]
class Subject: class Subject:
def __init__(self, subject_id=None, tuple=None): def __init__(self, subject_id=None, tuple=None):
@ -329,6 +356,10 @@ class Subject:
def properties(self): def properties(self):
return (SubjectProperties & self.__tuple).fetch(as_dict=True) return (SubjectProperties & self.__tuple).fetch(as_dict=True)
@property
def _tuple(self):
return self.__tuple.copy()
@staticmethod @staticmethod
def find(species=None): def find(species=None):
subjs = Subjects & True subjs = Subjects & True