jgrewe/fishbook
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[fishbook] add _tuple property that returns a copy of the db tuple

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This commit is contained in:
Jan Grewe 2019-10-02 18:09:37 +02:00
parent 77c0460ca9
commit d21c75cc7f
1 changed files with 31 additions and 0 deletions
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31
fishbook/fishbook.py
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@ -84,6 +84,10 @@ class Cell:
str += "Cell: %s \t type: %s\n"%(self.id, self.type)
return str
@property
def _tuple(self):
return self.__tuple.copy()
class Dataset:
def __init__(self, dataset_id=None, tuple=None):
@ -187,6 +191,10 @@ class Dataset:
break
self.__samplerate = 1000. / float(si)
@property
def _tuple(self):
return self.__tuple.copy()
class RePro:
def __init__(self, repro_id=None, tuple=None):
@ -276,6 +284,10 @@ class RePro:
repros = repros & p
return [RePro(tuple=r) for r in repros]
@property
def _tuple(self):
return self.__tuple.copy()
class Stimulus:
def __init__(self, stimulus_id=None, tuple=None):
@ -299,6 +311,21 @@ class Stimulus:
def settings(self):
return _safe_get_val(self.__tuple, "settings", "")
@property
def _tuple(self):
return self.__tuple.copy()
@staticmethod
def find(cell_id=None, repro_id=None, settings=None):
stims = Stimuli & True
if cell_id:
stims = stims & "cell_id = '{0:s}'".format(cell_id)
if repro_id:
stims = stims & "repro_id = '{0:s}'".format(repro_id)
if settings:
stims = stims & "settings like '%{0:s}%'".format(settings)
return [Stimulus(tuple=s) for s in stims]
class Subject:
def __init__(self, subject_id=None, tuple=None):
@ -329,6 +356,10 @@ class Subject:
def properties(self):
return (SubjectProperties & self.__tuple).fetch(as_dict=True)
@property
def _tuple(self):
return self.__tuple.copy()
@staticmethod
def find(species=None):
subjs = Subjects & True