import numpy as np from thunderhopper.filetools import search_files from thunderhopper.modeltools import load_data, save_data from misc_functions import sort_files_by_rec from IPython import embed # GENERAL SETTINGS: target_species = [ 'Chorthippus_biguttulus', 'Chorthippus_mollis', 'Chrysochraon_dispar', 'Euchorthippus_declivus', 'Gomphocerippus_rufus', 'Omocestus_rufipes', 'Pseudochorthippus_parallelus', ] search_path = '../data/inv/log_hp/' save_path = '../data/inv/log_hp/collected/' # EXECUTION: for i, species in enumerate(target_species): print(f'Processing {species}') # Fetch all species-specific song files: all_paths = search_files(species, incl='noise', ext='npz', dir=search_path) # Run through files: for j, path in enumerate(all_paths): # Load invariance data: data, config = load_data(path, ['scales', 'measure_inv']) scales, measure = data['scales'], data['measure_inv'] if j == 0: # Prepare species-specific storage: spec_data = np.zeros((measure.shape + (len(all_paths),)), dtype=float) # Log file data: spec_data[..., j] = measure # Save collected file data: save_name = save_path + species archive = dict(scales=scales, measure_inv=spec_data) save_data(save_name, archive, config, overwrite=True) print('Done.')