import numpy as np from thunderhopper.modeltools import load_data, save_data from thunderhopper.filetools import search_files, crop_paths from thunderhopper.filters import decibel, sosfilter from IPython import embed # GENERAL SETTINGS: example_file = 'Omocestus_rufipes_DJN_32-40s724ms-48s779ms' search_target = ['*', example_file][1] data_paths = search_files(search_target, excl='noise', dir='../data/processed/') noise_path = '../data/processed/white_noise_sd-1.npz' save_path = '../data/inv/log_hp/' # ANALYSIS SETTINGS: add_noise = search_target == '*' or False save_detailed = search_target == example_file example_scales = np.array([0.1, 1, 10, 30, 100, 300]) scales = np.geomspace(0.01, 10000, 1000) scales = np.unique(np.concatenate((scales, example_scales))) # PREPARATION: pure_noise = np.load(noise_path)['filt'] # EXECUTION: for data_path, name in zip(data_paths, crop_paths(data_paths)): print(f'Processing {name}') # Get filtered song (prior to envelope extraction): data, config = load_data(data_path, files='filt') song, rate = data['filt'], config['rate'] # Get song segment to be analyzed: time = np.arange(song.shape[0]) / rate start, end = data['songs_0'].ravel() segment = (time >= start) & (time <= end) # Normalize song component: song /= song[segment].std() if add_noise: # Get normalized noise component: noise = pure_noise[:song.shape[0]] noise /= noise[segment].std() # Prepare storage: measure_inv = np.zeros_like(scales) if save_detailed: # Prepare optional storage: measure_env = np.zeros_like(scales) measure_log = np.zeros_like(scales) snip_env = np.zeros((song.shape[0], example_scales.size)) snip_log = np.zeros((song.shape[0], example_scales.size)) snip_inv = np.zeros((song.shape[0], example_scales.size)) # Execute piecewise: for i, scale in enumerate(scales): # Get scaled mixture: mix = song * scale if add_noise: mix += noise # Process mixture: mix = sosfilter(np.abs(mix), rate, config['env_fcut'], 'lp', padtype='even', padlen=config['padlen']) mix_log = decibel(mix, ref=1) mix_inv = sosfilter(mix_log, rate, config['inv_fcut'], 'hp', padtype='constant', padlen=config['padlen']) # Log intensity measures: measure_inv[i] = mix_inv[segment].std() if save_detailed: measure_env[i] = mix[segment].std() measure_log[i] = mix_log[segment].std() if scale in example_scales: # Log snippet data: save_ind = np.nonzero(example_scales == scale)[0][0] snip_env[:, save_ind] = mix snip_log[:, save_ind] = mix_log snip_inv[:, save_ind] = mix_inv # Save analysis results: if save_path is not None: archive = dict( scales=scales, example_scales=example_scales, measure_inv=measure_inv, ) if save_detailed: archive.update( measure_env=measure_env, measure_log=measure_log, snip_env=snip_env, snip_log=snip_log, snip_inv=snip_inv, ) file_name = save_path + name if add_noise: file_name += '_noise' save_data(file_name, archive, config, overwrite=True) print('Done.') embed()