diff --git a/cite.bib b/cite.bib index e69de29..4a1beb9 100644 --- a/cite.bib +++ b/cite.bib @@ -0,0 +1,8 @@ +@article{clemens2011, + author = "Jan Clemens, Olaf Kutzki; Bernd Ronacher; Susanne Schreiber; Sandra Wohlgemuth", + journal = "PNAS", + volume = "108", + number = "33", + year = "2011", + DOI = "https://doi.org/10.1073/pnas.1104506108", +} diff --git a/main.aux b/main.aux index af21313..294a3bd 100644 --- a/main.aux +++ b/main.aux @@ -1,8 +1,19 @@ \relax +\abx@aux@refcontext{nyt/global//global/global} \@writefile{toc}{\contentsline {section}{\numberline {1}The sensory world of a grasshopper}{1}{}\protected@file@percent } -\@writefile{toc}{\contentsline {section}{\numberline {2}Pre-split pathway: Population pre-processing}{2}{}\protected@file@percent } -\@writefile{toc}{\contentsline {section}{\numberline {3}Post-split pathway: Feature extraction}{2}{}\protected@file@percent } -\@writefile{toc}{\contentsline {section}{\numberline {4}Pre-split intensity invariance:\\Logarithm-highpass mechanism}{3}{}\protected@file@percent } -\@writefile{toc}{\contentsline {section}{\numberline {5}Post-split intensity invariance:\\Threshold-lowpass mechanism}{3}{}\protected@file@percent } -\@writefile{toc}{\contentsline {section}{\numberline {6}Conclusion and outlook}{3}{}\protected@file@percent } -\gdef \@abspage@last{3} +\abx@aux@cite{0}{clemens2011} +\abx@aux@segm{0}{0}{clemens2011} +\@writefile{toc}{\contentsline {section}{\numberline {2}Developing a functional model of\\the grasshopper auditory pathway}{2}{}\protected@file@percent } +\@writefile{toc}{\contentsline {subsection}{\numberline {2.1}Population-driven signal pre-processing}{2}{}\protected@file@percent } +\abx@aux@page{1}{2} +\abx@aux@cite{0}{clemens2011} +\abx@aux@segm{0}{0}{clemens2011} +\@writefile{toc}{\contentsline {subsection}{\numberline {2.2}Feature extraction by individual neurons}{3}{}\protected@file@percent } +\abx@aux@page{2}{3} +\@writefile{toc}{\contentsline {section}{\numberline {3}Two mechanisms driving the emergence of intensity-invariant song representation}{4}{}\protected@file@percent } +\@writefile{toc}{\contentsline {subsection}{\numberline {3.1}Logarithmic scaling \& spike-frequency adaptation}{4}{}\protected@file@percent } +\@writefile{toc}{\contentsline {subsection}{\numberline {3.2}Threshold nonlinearity \& temporal averaging}{4}{}\protected@file@percent } +\@writefile{toc}{\contentsline {section}{\numberline {4}Discriminating species-specific song\\patterns in feature space}{4}{}\protected@file@percent } +\@writefile{toc}{\contentsline {section}{\numberline {5}Conclusions \& outlook}{4}{}\protected@file@percent } +\abx@aux@read@bbl@mdfivesum{D9585839A1478809D4C6E9E5BFFC8FE4} +\gdef \@abspage@last{4} diff --git a/main.bbl b/main.bbl new file mode 100644 index 0000000..43be07f --- /dev/null +++ b/main.bbl @@ -0,0 +1,53 @@ +% $ biblatex auxiliary file $ +% $ biblatex bbl format version 3.2 $ +% Do not modify the above lines! +% +% This is an auxiliary file used by the 'biblatex' package. +% This file may safely be deleted. It will be recreated by +% biber as required. +% +\begingroup +\makeatletter +\@ifundefined{ver@biblatex.sty} + {\@latex@error + {Missing 'biblatex' package} + {The bibliography requires the 'biblatex' package.} + \aftergroup\endinput} + {} +\endgroup + + +\refsection{0} + \datalist[entry]{nyt/global//global/global} + \entry{clemens2011}{article}{} + \name{author}{1}{}{% + {{un=0,uniquepart=base,hash=8973f147c607bdde5ce73f7e82d74cdf}{% + family={Jan\bibnamedelima Clemens}, + familyi={J\bibinitperiod\bibinitdelim C\bibinitperiod}, + given={Olaf\bibnamedelimb Kutzki;\bibnamedelimb Bernd\bibnamedelimb Ronacher;\bibnamedelimb Susanne\bibnamedelimb Schreiber;\bibnamedelimb Sandra\bibnamedelima Wohlgemuth}, + giveni={O\bibinitperiod\bibinitdelim K\bibinitperiod\bibinitdelim B\bibinitperiod\bibinitdelim R\bibinitperiod\bibinitdelim S\bibinitperiod\bibinitdelim S\bibinitperiod\bibinitdelim S\bibinitperiod\bibinitdelim W\bibinitperiod}, + givenun=0}}% + } + \strng{namehash}{8973f147c607bdde5ce73f7e82d74cdf} + \strng{fullhash}{8973f147c607bdde5ce73f7e82d74cdf} + \strng{bibnamehash}{8973f147c607bdde5ce73f7e82d74cdf} + \strng{authorbibnamehash}{8973f147c607bdde5ce73f7e82d74cdf} + \strng{authornamehash}{8973f147c607bdde5ce73f7e82d74cdf} + \strng{authorfullhash}{8973f147c607bdde5ce73f7e82d74cdf} + \field{sortinit}{J} + \field{sortinithash}{b2f54a9081ace9966a7cb9413811edb4} + \field{extradatescope}{labelyear} + \field{labeldatesource}{} + \field{labelnamesource}{author} + \field{journaltitle}{PNAS} + \field{number}{33} + \field{volume}{108} + \field{year}{2011} + \verb{doi} + \verb https://doi.org/10.1073/pnas.1104506108 + \endverb + \endentry + \enddatalist +\endrefsection +\endinput + diff --git a/main.bbl-SAVE-ERROR b/main.bbl-SAVE-ERROR new file mode 100644 index 0000000..43be07f --- /dev/null +++ b/main.bbl-SAVE-ERROR @@ -0,0 +1,53 @@ +% $ biblatex auxiliary file $ +% $ biblatex bbl format version 3.2 $ +% Do not modify the above lines! +% +% This is an auxiliary file used by the 'biblatex' package. +% This file may safely be deleted. It will be recreated by +% biber as required. +% +\begingroup +\makeatletter +\@ifundefined{ver@biblatex.sty} + {\@latex@error + {Missing 'biblatex' package} + {The bibliography requires the 'biblatex' package.} + \aftergroup\endinput} + {} +\endgroup + + +\refsection{0} + \datalist[entry]{nyt/global//global/global} + \entry{clemens2011}{article}{} + \name{author}{1}{}{% + {{un=0,uniquepart=base,hash=8973f147c607bdde5ce73f7e82d74cdf}{% + family={Jan\bibnamedelima Clemens}, + familyi={J\bibinitperiod\bibinitdelim C\bibinitperiod}, + given={Olaf\bibnamedelimb Kutzki;\bibnamedelimb Bernd\bibnamedelimb Ronacher;\bibnamedelimb Susanne\bibnamedelimb Schreiber;\bibnamedelimb Sandra\bibnamedelima Wohlgemuth}, + giveni={O\bibinitperiod\bibinitdelim K\bibinitperiod\bibinitdelim B\bibinitperiod\bibinitdelim R\bibinitperiod\bibinitdelim S\bibinitperiod\bibinitdelim S\bibinitperiod\bibinitdelim S\bibinitperiod\bibinitdelim W\bibinitperiod}, + givenun=0}}% + } + \strng{namehash}{8973f147c607bdde5ce73f7e82d74cdf} + \strng{fullhash}{8973f147c607bdde5ce73f7e82d74cdf} + \strng{bibnamehash}{8973f147c607bdde5ce73f7e82d74cdf} + \strng{authorbibnamehash}{8973f147c607bdde5ce73f7e82d74cdf} + \strng{authornamehash}{8973f147c607bdde5ce73f7e82d74cdf} + \strng{authorfullhash}{8973f147c607bdde5ce73f7e82d74cdf} + \field{sortinit}{J} + \field{sortinithash}{b2f54a9081ace9966a7cb9413811edb4} + \field{extradatescope}{labelyear} + \field{labeldatesource}{} + \field{labelnamesource}{author} + \field{journaltitle}{PNAS} + \field{number}{33} + \field{volume}{108} + \field{year}{2011} + \verb{doi} + \verb https://doi.org/10.1073/pnas.1104506108 + \endverb + \endentry + \enddatalist +\endrefsection +\endinput + diff --git a/main.bcf b/main.bcf new file mode 100644 index 0000000..c3a9289 --- /dev/null +++ b/main.bcf @@ -0,0 +1,2398 @@ + + + + + + output_encoding + utf8 + + + input_encoding + utf8 + + + debug + 0 + + + mincrossrefs + 2 + + + minxrefs + 2 + + + sortcase + 1 + + + sortupper + 1 + + + + + + + alphaothers + + + + + extradatecontext + labelname + labeltitle + + + labelalpha + 0 + + + labelnamespec + shortauthor + author + shorteditor + editor + translator + + + labeltitle + 0 + + + labeltitlespec + shorttitle + title + maintitle + + + labeltitleyear + 0 + + + labeldateparts + 1 + + + labeldatespec + date + year + eventdate + origdate + urldate + nodate + + + julian + 0 + + + gregorianstart + 1582-10-15 + + + maxalphanames + 3 + + + maxbibnames + 3 + + + maxcitenames + 3 + + + maxsortnames + 3 + + + maxitems + 3 + + + minalphanames + 1 + + + minbibnames + 1 + + + mincitenames + 1 + + + minsortnames + 1 + + + minitems + 1 + + + nohashothers + 0 + + + noroman + 0 + + + nosortothers + 0 + + + pluralothers + 0 + + + singletitle + 0 + + + skipbib + 0 + + + skipbiblist + 0 + + + skiplab + 0 + + + sortalphaothers + + + + + sortlocale + english + + + sortingtemplatename + nyt + + + sortsets + 0 + + + uniquelist + true + + + uniquename + full + + + uniqueprimaryauthor + 0 + + + uniquetitle + 0 + + + uniquebaretitle + 0 + + + uniquework + 0 + + + useprefix + 0 + + + useafterword + 1 + + + useannotator + 1 + + + useauthor + 1 + + + usebookauthor + 1 + + + usecommentator + 1 + + + useeditor + 1 + + + useeditora + 1 + + + useeditorb + 1 + + + useeditorc + 1 + + + useforeword + 1 + + + useholder + 1 + + + useintroduction + 1 + + + usenamea + 1 + + + usenameb + 1 + + + usenamec + 1 + + + usetranslator + 0 + + + useshortauthor + 1 + + + useshorteditor + 1 + + + + + + extradatecontext + labelname + labeltitle + + + labelalpha + 0 + + + labelnamespec + shortauthor + author + shorteditor + editor + translator + + + labeltitle + 0 + + + labeltitlespec + shorttitle + title + maintitle + + + labeltitleyear + 0 + + + labeldateparts + 1 + + + labeldatespec + date + year + eventdate + origdate + urldate + nodate + + + maxalphanames + 3 + + + maxbibnames + 3 + + + maxcitenames + 3 + + + maxsortnames + 3 + + + maxitems + 3 + + + minalphanames + 1 + + + minbibnames + 1 + + + mincitenames + 1 + + + minsortnames + 1 + + + minitems + 1 + + + nohashothers + 0 + + + noroman + 0 + + + nosortothers + 0 + + + singletitle + 0 + + + skipbib + 0 + + + skipbiblist + 0 + + + skiplab + 0 + + + uniquelist + true + + + uniquename + full + + + uniqueprimaryauthor + 0 + + + uniquetitle + 0 + + + uniquebaretitle + 0 + + + uniquework + 0 + + + useprefix + 0 + + + useafterword + 1 + + + useannotator + 1 + + + useauthor + 1 + + + usebookauthor + 1 + + + usecommentator + 1 + + + useeditor + 1 + + + useeditora + 1 + + + useeditorb + 1 + + + useeditorc + 1 + + + useforeword + 1 + + + useholder + 1 + + + useintroduction + 1 + + + usenamea + 1 + + + usenameb + 1 + + + usenamec + 1 + + + usetranslator + 0 + + + useshortauthor + 1 + + + useshorteditor + 1 + + + + + datamodel + labelalphanametemplate + labelalphatemplate + inheritance + translit + uniquenametemplate + sortingnamekeytemplate + sortingtemplate + extradatespec + extradatecontext + labelnamespec + labeltitlespec + labeldatespec + controlversion + alphaothers + sortalphaothers + presort + texencoding + bibencoding + sortingtemplatename + sortlocale + language + autolang + langhook + indexing + hyperref + backrefsetstyle + block + pagetracker + citecounter + citetracker + ibidtracker + idemtracker + opcittracker + loccittracker + labeldate + labeltime + dateera + date + time + eventdate + eventtime + origdate + origtime + urldate + urltime + alldatesusetime + alldates + alltimes + gregorianstart + autocite + notetype + uniquelist + uniquename + refsection + refsegment + citereset + sortlos + babel + datelabel + backrefstyle + arxiv + familyinits + giveninits + prefixinits + suffixinits + useafterword + useannotator + useauthor + usebookauthor + usecommentator + useeditor + useeditora + useeditorb + useeditorc + useforeword + useholder + useintroduction + usenamea + usenameb + usenamec + usetranslator + useshortauthor + useshorteditor + debug + loadfiles + safeinputenc + sortcase + sortupper + terseinits + abbreviate + dateabbrev + clearlang + sortcites + sortsets + backref + backreffloats + trackfloats + parentracker + labeldateusetime + datecirca + dateuncertain + dateusetime + eventdateusetime + origdateusetime + urldateusetime + julian + datezeros + timezeros + timezones + seconds + autopunct + punctfont + labelnumber + labelalpha + labeltitle + labeltitleyear + labeldateparts + pluralothers + nohashothers + nosortothers + noroman + singletitle + uniquetitle + uniquebaretitle + uniquework + uniqueprimaryauthor + defernumbers + locallabelwidth + bibwarn + useprefix + skipbib + skipbiblist + skiplab + dataonly + defernums + firstinits + sortfirstinits + sortgiveninits + labelyear + isbn + url + doi + eprint + related + dashed + mergedate + bibtexcaseprotection + mincrossrefs + minxrefs + maxnames + minnames + maxbibnames + minbibnames + maxcitenames + mincitenames + maxsortnames + minsortnames + maxitems + minitems + maxalphanames + minalphanames + maxparens + dateeraauto + + + alphaothers + sortalphaothers + presort + indexing + citetracker + ibidtracker + idemtracker + opcittracker + loccittracker + uniquelist + uniquename + familyinits + giveninits + prefixinits + suffixinits + useafterword + useannotator + useauthor + usebookauthor + usecommentator + useeditor + useeditora + useeditorb + useeditorc + useforeword + useholder + useintroduction + usenamea + usenameb + usenamec + usetranslator + useshortauthor + useshorteditor + terseinits + abbreviate + dateabbrev + clearlang + labelnumber + labelalpha + labeltitle + labeltitleyear + labeldateparts + nohashothers + nosortothers + noroman + singletitle + uniquetitle + uniquebaretitle + uniquework + uniqueprimaryauthor + useprefix + skipbib + skipbiblist + skiplab + dataonly + skiplos + labelyear + isbn + url + doi + eprint + related + mergedate + bibtexcaseprotection + labelalphatemplate + translit + sortexclusion + sortinclusion + extradatecontext + labelnamespec + labeltitlespec + labeldatespec + maxnames + minnames + maxbibnames + minbibnames + maxcitenames + mincitenames + maxsortnames + minsortnames + maxitems + minitems + maxalphanames + minalphanames + + + noinherit + nametemplates + labelalphanametemplatename + uniquenametemplatename + sortingnamekeytemplatename + presort + indexing + citetracker + ibidtracker + idemtracker + opcittracker + loccittracker + uniquelist + uniquename + familyinits + giveninits + prefixinits + suffixinits + useafterword + useannotator + useauthor + usebookauthor + usecommentator + useeditor + useeditora + useeditorb + useeditorc + useforeword + useholder + useintroduction + usenamea + usenameb + usenamec + usetranslator + useshortauthor + useshorteditor + terseinits + abbreviate + dateabbrev + clearlang + labelnumber + labelalpha + labeltitle + labeltitleyear + labeldateparts + nohashothers + nosortothers + noroman + singletitle + uniquetitle + uniquebaretitle + uniquework + uniqueprimaryauthor + useprefix + skipbib + skipbiblist + skiplab + dataonly + skiplos + isbn + url + doi + eprint + related + mergedate + bibtexcaseprotection + maxnames + minnames + maxbibnames + minbibnames + maxcitenames + mincitenames + maxsortnames + minsortnames + maxitems + minitems + maxalphanames + minalphanames + + + nametemplates + labelalphanametemplatename + uniquenametemplatename + sortingnamekeytemplatename + uniquelist + uniquename + familyinits + giveninits + prefixinits + suffixinits + terseinits + nohashothers + nosortothers + useprefix + + + nametemplates + labelalphanametemplatename + uniquenametemplatename + sortingnamekeytemplatename + uniquename + familyinits + giveninits + prefixinits + suffixinits + terseinits + useprefix + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + prefix + family + + + + + shorthand + label + labelname + labelname + + + year + + + + + + labelyear + year + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + + prefix + family + given + + + + + prefix + family + + + given + + + suffix + + + prefix + + + mm + + + + sf,sm,sn,pf,pm,pn,pp + family,given,prefix,suffix + boolean,integer,string,xml + default,transliteration,transcription,translation + + + article + artwork + audio + bibnote + book + bookinbook + booklet + collection + commentary + customa + customb + customc + customd + custome + customf + dataset + inbook + incollection + inproceedings + inreference + image + jurisdiction + legal + legislation + letter + manual + misc + movie + music + mvcollection + mvreference + mvproceedings + mvbook + online + patent + performance + periodical + proceedings + reference + report + review + set + software + standard + suppbook + suppcollection + suppperiodical + thesis + unpublished + video + xdata + + + sortyear + volume + volumes + abstract + addendum + annotation + booksubtitle + booktitle + booktitleaddon + chapter + edition + eid + entrysubtype + eprintclass + eprinttype + eventtitle + eventtitleaddon + gender + howpublished + indexsorttitle + indextitle + isan + isbn + ismn + isrn + issn + issue + issuesubtitle + issuetitle + issuetitleaddon + iswc + journalsubtitle + journaltitle + journaltitleaddon + label + langid + langidopts + library + mainsubtitle + maintitle + maintitleaddon + nameaddon + note + number + origtitle + pagetotal + part + relatedstring + relatedtype + reprinttitle + series + shorthandintro + subtitle + title + titleaddon + usera + userb + userc + userd + usere + userf + venue + version + shorthand + shortjournal + shortseries + shorttitle + sorttitle + sortshorthand + sortkey + presort + institution + lista + listb + listc + listd + liste + listf + location + organization + origlocation + origpublisher + publisher + afterword + annotator + author + bookauthor + commentator + editor + editora + editorb + editorc + foreword + holder + introduction + namea + nameb + namec + translator + shortauthor + shorteditor + sortname + authortype + editoratype + editorbtype + editorctype + editortype + bookpagination + nameatype + namebtype + namectype + pagination + pubstate + type + language + origlanguage + crossref + xref + date + endyear + year + month + day + hour + minute + second + timezone + yeardivision + endmonth + endday + endhour + endminute + endsecond + endtimezone + endyeardivision + eventdate + eventendyear + eventyear + eventmonth + eventday + eventhour + eventminute + eventsecond + eventtimezone + eventyeardivision + eventendmonth + eventendday + eventendhour + eventendminute + eventendsecond + eventendtimezone + eventendyeardivision + origdate + origendyear + origyear + origmonth + origday + orighour + origminute + origsecond + origtimezone + origyeardivision + origendmonth + origendday + origendhour + origendminute + origendsecond + origendtimezone + origendyeardivision + urldate + urlendyear + urlyear + urlmonth + urlday + urlhour + urlminute + urlsecond + urltimezone + urlyeardivision + urlendmonth + urlendday + urlendhour + urlendminute + urlendsecond + urlendtimezone + urlendyeardivision + doi + eprint + file + verba + verbb + verbc + url + xdata + ids + entryset + related + keywords + options + relatedoptions + pages + execute + + + abstract + annotation + authortype + bookpagination + crossref + day + doi + eprint + eprintclass + eprinttype + endday + endhour + endminute + endmonth + endsecond + endtimezone + endyear + endyeardivision + entryset + entrysubtype + execute + file + gender + hour + ids + indextitle + indexsorttitle + isan + ismn + iswc + keywords + label + langid + langidopts + library + lista + listb + listc + listd + liste + listf + minute + month + namea + nameb + namec + nameatype + namebtype + namectype + nameaddon + options + origday + origendday + origendhour + origendminute + origendmonth + origendsecond + origendtimezone + origendyear + origendyeardivision + orighour + origminute + origmonth + origsecond + origtimezone + origyear + origyeardivision + origlocation + origpublisher + origtitle + pagination + presort + related + relatedoptions + relatedstring + relatedtype + second + shortauthor + shorteditor + shorthand + shorthandintro + shortjournal + shortseries + shorttitle + sortkey + sortname + sortshorthand + sorttitle + sortyear + timezone + url + urlday + urlendday + urlendhour + urlendminute + urlendmonth + urlendsecond + urlendtimezone + urlendyear + urlhour + urlminute + urlmonth + urlsecond + urltimezone + urlyear + usera + userb + userc + userd + usere + userf + verba + verbb + verbc + xdata + xref + year + yeardivision + + + set + entryset + + + article + addendum + annotator + author + commentator + editor + editora + editorb + editorc + editortype + editoratype + editorbtype + editorctype + eid + issn + issue + issuetitle + issuesubtitle + issuetitleaddon + journalsubtitle + journaltitle + journaltitleaddon + language + note + number + origlanguage + pages + pubstate + series + subtitle + title + titleaddon + translator + version + volume + + + bibnote + note + + + book + author + addendum + afterword + annotator + chapter + commentator + edition + editor + editora + editorb + editorc + editortype + editoratype + editorbtype + editorctype + eid + foreword + introduction + isbn + language + location + maintitle + maintitleaddon + mainsubtitle + note + number + origlanguage + pages + pagetotal + part + publisher + pubstate + series + subtitle + title + titleaddon + translator + volume + volumes + + + mvbook + addendum + afterword + annotator + author + commentator + edition + editor + editora + editorb + editorc + editortype + editoratype + editorbtype + editorctype + foreword + introduction + isbn + language + location + note + number + origlanguage + pagetotal + publisher + pubstate + series + subtitle + title + titleaddon + translator + volume + volumes + + + inbook + bookinbook + suppbook + addendum + afterword + annotator + author + booktitle + bookauthor + booksubtitle + booktitleaddon + chapter + commentator + edition + editor + editora + editorb + editorc + editortype + editoratype + editorbtype + editorctype + eid + foreword + introduction + isbn + language + location + mainsubtitle + maintitle + maintitleaddon + note + number + origlanguage + part + publisher + pages + pubstate + series + subtitle + title + titleaddon + translator + volume + volumes + + + booklet + addendum + author + chapter + editor + editortype + eid + howpublished + language + location + note + pages + pagetotal + pubstate + subtitle + title + titleaddon + type + + + collection + reference + addendum + afterword + annotator + chapter + commentator + edition + editor + editora + editorb + editorc + editortype + editoratype + editorbtype + editorctype + eid + foreword + introduction + isbn + language + location + mainsubtitle + maintitle + maintitleaddon + note + number + origlanguage + pages + pagetotal + part + publisher + pubstate + series + subtitle + title + titleaddon + translator + volume + volumes + + + mvcollection + mvreference + addendum + afterword + annotator + author + commentator + edition + editor + editora + editorb + editorc + editortype + editoratype + editorbtype + editorctype + foreword + introduction + isbn + language + location + note + number + origlanguage + publisher + pubstate + subtitle + title + titleaddon + translator + volume + volumes + + + incollection + suppcollection + inreference + addendum + afterword + annotator + author + booksubtitle + booktitle + booktitleaddon + chapter + commentator + edition + editor + editora + editorb + editorc + editortype + editoratype + editorbtype + editorctype + eid + foreword + introduction + isbn + language + location + mainsubtitle + maintitle + maintitleaddon + note + number + origlanguage + pages + part + publisher + pubstate + series + subtitle + title + titleaddon + translator + volume + volumes + + + dataset + addendum + author + edition + editor + editortype + language + location + note + number + organization + publisher + pubstate + series + subtitle + title + titleaddon + type + version + + + manual + addendum + author + chapter + edition + editor + editortype + eid + isbn + language + location + note + number + organization + pages + pagetotal + publisher + pubstate + series + subtitle + title + titleaddon + type + version + + + misc + software + addendum + author + editor + editortype + howpublished + language + location + note + organization + pubstate + subtitle + title + titleaddon + type + version + + + online + addendum + author + editor + editortype + language + note + organization + pubstate + subtitle + title + titleaddon + version + + + patent + addendum + author + holder + location + note + number + pubstate + subtitle + title + titleaddon + type + version + + + periodical + addendum + editor + editora + editorb + editorc + editortype + editoratype + editorbtype + editorctype + issn + issue + issuesubtitle + issuetitle + issuetitleaddon + language + note + number + pubstate + series + subtitle + title + titleaddon + volume + yeardivision + + + mvproceedings + addendum + editor + editortype + eventday + eventendday + eventendhour + eventendminute + eventendmonth + eventendsecond + eventendtimezone + eventendyear + eventendyeardivision + eventhour + eventminute + eventmonth + eventsecond + eventtimezone + eventyear + eventyeardivision + eventtitle + eventtitleaddon + isbn + language + location + note + number + organization + pagetotal + publisher + pubstate + series + subtitle + title + titleaddon + venue + volumes + + + proceedings + addendum + chapter + editor + editortype + eid + eventday + eventendday + eventendhour + eventendminute + eventendmonth + eventendsecond + eventendtimezone + eventendyear + eventendyeardivision + eventhour + eventminute + eventmonth + eventsecond + eventtimezone + eventyear + eventyeardivision + eventtitle + eventtitleaddon + isbn + language + location + mainsubtitle + maintitle + maintitleaddon + note + number + organization + pages + pagetotal + part + publisher + pubstate + series + subtitle + title + titleaddon + venue + volume + volumes + + + inproceedings + addendum + author + booksubtitle + booktitle + booktitleaddon + chapter + editor + editortype + eid + eventday + eventendday + eventendhour + eventendminute + eventendmonth + eventendsecond + eventendtimezone + eventendyear + eventendyeardivision + eventhour + eventminute + eventmonth + eventsecond + eventtimezone + eventyear + eventyeardivision + eventtitle + eventtitleaddon + isbn + language + location + mainsubtitle + maintitle + maintitleaddon + note + number + organization + pages + part + publisher + pubstate + series + subtitle + title + titleaddon + venue + volume + volumes + + + report + addendum + author + chapter + eid + institution + isrn + language + location + note + number + pages + pagetotal + pubstate + subtitle + title + titleaddon + type + version + + + thesis + addendum + author + chapter + eid + institution + language + location + note + pages + pagetotal + pubstate + subtitle + title + titleaddon + type + + + unpublished + addendum + author + eventday + eventendday + eventendhour + eventendminute + eventendmonth + eventendsecond + eventendtimezone + eventendyear + eventendyeardivision + eventhour + eventminute + eventmonth + eventsecond + eventtimezone + eventyear + eventyeardivision + eventtitle + eventtitleaddon + howpublished + language + location + note + pubstate + subtitle + title + titleaddon + type + venue + + + abstract + addendum + afterword + annotator + author + bookauthor + booksubtitle + booktitle + booktitleaddon + chapter + commentator + editor + editora + editorb + editorc + foreword + holder + institution + introduction + issuesubtitle + issuetitle + issuetitleaddon + journalsubtitle + journaltitle + journaltitleaddon + location + mainsubtitle + maintitle + maintitleaddon + nameaddon + note + organization + origlanguage + origlocation + origpublisher + origtitle + part + publisher + relatedstring + series + shortauthor + shorteditor + shorthand + shortjournal + shortseries + shorttitle + sortname + sortshorthand + sorttitle + subtitle + title + titleaddon + translator + venue + + + article + book + inbook + bookinbook + suppbook + booklet + collection + incollection + suppcollection + manual + misc + mvbook + mvcollection + online + patent + periodical + suppperiodical + proceedings + inproceedings + reference + inreference + report + set + thesis + unpublished + + + date + year + + + + + set + + entryset + + + + article + + author + journaltitle + title + + + + book + mvbook + + author + title + + + + inbook + bookinbook + suppbook + + author + title + booktitle + + + + booklet + + + author + editor + + title + + + + collection + reference + mvcollection + mvreference + + editor + title + + + + incollection + suppcollection + inreference + + author + editor + title + booktitle + + + + dataset + + title + + + + manual + + title + + + + misc + software + + title + + + + online + + title + + url + doi + eprint + + + + + patent + + author + title + number + + + + periodical + + editor + title + + + + proceedings + mvproceedings + + title + + + + inproceedings + + author + title + booktitle + + + + report + + author + title + type + institution + + + + thesis + + author + title + type + institution + + + + unpublished + + author + title + + + + + isbn + + + issn + + + ismn + + + gender + + + + + + + cite.bib + + + clemens2011 + clemens2011 + + + + + presort + + + sortkey + + + sortname + author + editor + translator + sorttitle + title + + + sortyear + year + + + sorttitle + title + + + volume + 0 + + + + diff --git a/main.fdb_latexmk b/main.fdb_latexmk index 1369483..a72d5b8 100644 --- a/main.fdb_latexmk +++ b/main.fdb_latexmk @@ -1,9 +1,19 @@ # Fdb version 4 -["pdflatex"] 1762176495.21404 "/home/hartling/phd/paper/paper_2025/main.tex" "main.pdf" "main" 1762176495.6806 0 +["biber main"] 0 "main.bcf" "main.bbl" "main" 1762417587.30406 -1 + "cite.bib" 1762264926.38344 252 7fc49109df64576e199ce34111f01817 "" + "main.bcf" 1762417587.27334 107531 bb4289418b1a6604c7c781cbf02f8242 "pdflatex" + (generated) + "main.bbl" + "main.blg" + (rewritten before read) +["pdflatex"] 1762417586.89761 "/home/hartling/phd/paper/paper_2025/main.tex" "main.pdf" "main" 1762417587.30427 0 "/etc/texmf/web2c/texmf.cnf" 1761560044.43676 475 c0e671620eb5563b2130f56340a5fde8 "" - "/home/hartling/phd/paper/paper_2025/main.tex" 1762176494.59576 4271 bc74830901df5adda71d34ece5544147 "" + "/home/hartling/phd/paper/paper_2025/main.tex" 1762417586.83134 7134 2313f3873c7d82e385d75c42f1caca3c "" "/usr/share/texlive/texmf-dist/fonts/map/fontname/texfonts.map" 1577235249 3524 cb3e574dea2d1052e39280babc910dc8 "" + "/usr/share/texlive/texmf-dist/fonts/tfm/public/amsfonts/cmextra/cmex7.tfm" 1246382020 1004 54797486969f23fa377b128694d548df "" + "/usr/share/texlive/texmf-dist/fonts/tfm/public/amsfonts/cmextra/cmex8.tfm" 1246382020 988 bdf658c3bfc2d96d3c8b02cfc1c94c20 "" "/usr/share/texlive/texmf-dist/fonts/tfm/public/cm/cmbx12.tfm" 1136768653 1324 c910af8c371558dc20f2d7822f66fe64 "" + "/usr/share/texlive/texmf-dist/fonts/tfm/public/cm/cmex10.tfm" 1136768653 992 662f679a0b3d2d53c1b94050fdaa3f50 "" "/usr/share/texlive/texmf-dist/fonts/tfm/public/cm/cmmi12.tfm" 1136768653 1524 4414a8315f39513458b80dfc63bff03a "" "/usr/share/texlive/texmf-dist/fonts/tfm/public/cm/cmmi6.tfm" 1136768653 1512 f21f83efb36853c0b70002322c1ab3ad "" "/usr/share/texlive/texmf-dist/fonts/tfm/public/cm/cmmi8.tfm" 1136768653 1520 eccf95517727cb11801f4f1aee3a21b4 "" @@ -15,26 +25,61 @@ "/usr/share/texlive/texmf-dist/fonts/tfm/public/cm/cmsy6.tfm" 1136768653 1116 933a60c408fc0a863a92debe84b2d294 "" "/usr/share/texlive/texmf-dist/fonts/tfm/public/cm/cmsy8.tfm" 1136768653 1120 8b7d695260f3cff42e636090a8002094 "" "/usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmbx12.pfb" 1248133631 32080 340ef9bf63678554ee606688e7b5339d "" + "/usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmex10.pfb" 1248133631 30251 6afa5cb1d0204815a708a080681d4674 "" + "/usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmmi12.pfb" 1248133631 36741 fa121aac0049305630cf160b86157ee4 "" + "/usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmmi6.pfb" 1248133631 37166 8ab3487cbe3ab49ebce74c29ea2418db "" + "/usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmmi8.pfb" 1248133631 35469 70d41d2b9ea31d5d813066df7c99281c "" "/usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmr12.pfb" 1248133631 32722 d7379af29a190c3f453aba36302ff5a9 "" "/usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmr17.pfb" 1248133631 32362 179c33bbf43f19adbb3825bb4e36e57a "" + "/usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmr6.pfb" 1248133631 32734 69e00a6b65cedb993666e42eedb3d48f "" + "/usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmr8.pfb" 1248133631 32726 0a1aea6fcd6468ee2cf64d891f5c43c8 "" "/usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmsy10.pfb" 1248133631 32569 5e5ddc8df908dea60932f3c484a54c0d "" + "/usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmsy8.pfb" 1248133631 32626 4f5c1b83753b1dd3a97d1b399a005b4b "" + "/usr/share/texlive/texmf-dist/tex/generic/iftex/iftex.sty" 1644112042 7237 bdd120a32c8fdb4b433cf9ca2e7cd98a "" + "/usr/share/texlive/texmf-dist/tex/generic/infwarerr/infwarerr.sty" 1575499628 8356 7bbb2c2373aa810be568c29e333da8ed "" "/usr/share/texlive/texmf-dist/tex/generic/ltxcmds/ltxcmds.sty" 1701727651 17865 1a9bd36b4f98178fa551aca822290953 "" + "/usr/share/texlive/texmf-dist/tex/generic/pdftexcmds/pdftexcmds.sty" 1593379760 20089 80423eac55aa175305d35b49e04fe23b "" + "/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsbsy.sty" 1686341992 2222 499d61426192c39efd8f410ee1a52b9c "" + "/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsgen.sty" 1686341992 4173 82ac04dfb1256038fad068287fbb4fe6 "" + "/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsmath.sty" 1686341992 88371 d84032c0f422c3d1e282266c01bef237 "" + "/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsopn.sty" 1686341992 4474 b811654f4bf125f11506d13d13647efb "" + "/usr/share/texlive/texmf-dist/tex/latex/amsmath/amstext.sty" 1686341992 2444 0d0c1ee65478277e8015d65b86983da2 "" "/usr/share/texlive/texmf-dist/tex/latex/base/article.cls" 1705352648 20144 147463a6a579f4597269ef9565205cfe "" + "/usr/share/texlive/texmf-dist/tex/latex/base/ifthen.sty" 1705352648 5319 2b738d02ce36ada6dcdd9534940db0ee "" "/usr/share/texlive/texmf-dist/tex/latex/base/size12.clo" 1705352648 8449 f07039d8e4e89f21078d9b5137579bfc "" + "/usr/share/texlive/texmf-dist/tex/latex/biblatex/bbx/authoryear.bbx" 1566680006 8024 f170876981d3e1db9ed0abd5abc62dbe "" + "/usr/share/texlive/texmf-dist/tex/latex/biblatex/bbx/standard.bbx" 1609451401 25680 409c3f3d570418bc545e8065bebd0688 "" + "/usr/share/texlive/texmf-dist/tex/latex/biblatex/biblatex.cfg" 1342308459 69 249fa6df04d948e51b6d5c67bea30c42 "" + "/usr/share/texlive/texmf-dist/tex/latex/biblatex/biblatex.def" 1678141846 92527 8f6b3a677f74ea525477a813f33c4e65 "" + "/usr/share/texlive/texmf-dist/tex/latex/biblatex/biblatex.sty" 1678141846 528517 7eed285c714f532e12ae48b360c080f8 "" + "/usr/share/texlive/texmf-dist/tex/latex/biblatex/blx-case-expl3.sty" 1609451401 8433 72f8188742e7214b7068f345cd0287ac "" + "/usr/share/texlive/texmf-dist/tex/latex/biblatex/blx-compat.def" 1643926307 13919 5426dbe90e723f089052b4e908b56ef9 "" + "/usr/share/texlive/texmf-dist/tex/latex/biblatex/blx-dm.def" 1643926307 32455 8d3e554836db11aab80a8e11be62e1b1 "" + "/usr/share/texlive/texmf-dist/tex/latex/biblatex/cbx/authoryear.cbx" 1566680006 3976 2d46354b304f9bc8fda915fe9215de04 "" + "/usr/share/texlive/texmf-dist/tex/latex/biblatex/lbx/english.lbx" 1643926307 39965 48ce9ce3350aba9457f1020b1deba5cf "" "/usr/share/texlive/texmf-dist/tex/latex/etoolbox/etoolbox.sty" 1601931149 46845 3b58f70c6e861a13d927bff09d35ecbc "" "/usr/share/texlive/texmf-dist/tex/latex/graphics/keyval.sty" 1654720880 2671 7e67d78d9b88c845599a85b2d41f2e39 "" "/usr/share/texlive/texmf-dist/tex/latex/kvoptions/kvoptions.sty" 1655478651 22555 6d8e155cfef6d82c3d5c742fea7c992e "" "/usr/share/texlive/texmf-dist/tex/latex/kvsetkeys/kvsetkeys.sty" 1665067230 13815 760b0c02f691ea230f5359c4e1de23a7 "" "/usr/share/texlive/texmf-dist/tex/latex/l3backend/l3backend-pdftex.def" 1704491087 30006 57b07afb710ee2f649c65cfbafda39c1 "" + "/usr/share/texlive/texmf-dist/tex/latex/l3kernel/expl3.sty" 1705955748 6565 cfd9fd0a1d5f5ad985151778771ff7a9 "" + "/usr/share/texlive/texmf-dist/tex/latex/l3packages/xparse/xparse.sty" 1696969620 9327 c30c00c0072edba199ede5889311aaa9 "" + "/usr/share/texlive/texmf-dist/tex/latex/logreq/logreq.def" 1284153563 1620 fb1c32b818f2058eca187e5c41dfae77 "" + "/usr/share/texlive/texmf-dist/tex/latex/logreq/logreq.sty" 1284153563 6187 b27afc771af565d3a9ff1ca7d16d0d46 "" "/usr/share/texlive/texmf-dist/tex/latex/parskip/parskip.sty" 1615762720 4288 94714aa7f535440f33181fec52a31963 "" + "/usr/share/texlive/texmf-dist/tex/latex/url/url.sty" 1388531844 12796 8edb7d69a20b857904dd0ea757c14ec9 "" "/usr/share/texlive/texmf-dist/web2c/texmf.cnf" 1707919699 40399 f2c302f7d2af602abb742093540a5834 "" "/usr/share/texmf/web2c/texmf.cnf" 1707919699 40399 f2c302f7d2af602abb742093540a5834 "" "/var/lib/texmf/fonts/map/pdftex/updmap/pdftex.map" 1761648465.84635 5472669 54eaf61a88b6b7896ebd0dac973cb29c "" "/var/lib/texmf/web2c/pdftex/pdflatex.fmt" 1761648508 8213325 7fd20752ab46ff9aa583e4973d7433df "" - "main.aux" 1762176495.63975 820 973eb5ee311eebecc95bd614d829564c "pdflatex" - "main.tex" 1762176494.59576 4271 bc74830901df5adda71d34ece5544147 "" + "main.aux" 1762417587.27234 1555 cb560f4ec00169e5b4a23f81012c641f "pdflatex" + "main.bbl" 1762355512.8828 2032 d9585839a1478809d4c6e9e5bffc8fe4 "biber main" + "main.run.xml" 1762417587.27434 2305 d0067550f22ade5b49f22d40cea22838 "pdflatex" + "main.tex" 1762417586.83134 7134 2313f3873c7d82e385d75c42f1caca3c "" (generated) "main.aux" + "main.bcf" "main.log" "main.pdf" + "main.run.xml" (rewritten before read) diff --git a/main.fls b/main.fls index 5944a57..d62d496 100644 --- a/main.fls +++ b/main.fls @@ -24,16 +24,81 @@ INPUT /usr/share/texlive/texmf-dist/tex/latex/kvsetkeys/kvsetkeys.sty INPUT /usr/share/texlive/texmf-dist/tex/latex/kvsetkeys/kvsetkeys.sty INPUT /usr/share/texlive/texmf-dist/tex/latex/etoolbox/etoolbox.sty INPUT /usr/share/texlive/texmf-dist/tex/latex/etoolbox/etoolbox.sty +INPUT /usr/share/texlive/texmf-dist/tex/latex/amsmath/amsmath.sty +INPUT /usr/share/texlive/texmf-dist/tex/latex/amsmath/amsmath.sty +INPUT /usr/share/texlive/texmf-dist/tex/latex/amsmath/amsopn.sty +INPUT /usr/share/texlive/texmf-dist/tex/latex/amsmath/amstext.sty +INPUT /usr/share/texlive/texmf-dist/tex/latex/amsmath/amstext.sty +INPUT /usr/share/texlive/texmf-dist/tex/latex/amsmath/amsgen.sty +INPUT /usr/share/texlive/texmf-dist/tex/latex/amsmath/amsgen.sty +INPUT /usr/share/texlive/texmf-dist/tex/latex/amsmath/amsbsy.sty +INPUT /usr/share/texlive/texmf-dist/tex/latex/amsmath/amsbsy.sty +INPUT /usr/share/texlive/texmf-dist/tex/latex/amsmath/amsopn.sty +INPUT /usr/share/texlive/texmf-dist/tex/latex/biblatex/biblatex.sty +INPUT /usr/share/texlive/texmf-dist/tex/latex/biblatex/biblatex.sty +INPUT /usr/share/texlive/texmf-dist/tex/generic/pdftexcmds/pdftexcmds.sty +INPUT /usr/share/texlive/texmf-dist/tex/generic/pdftexcmds/pdftexcmds.sty +INPUT /usr/share/texlive/texmf-dist/tex/generic/infwarerr/infwarerr.sty +INPUT /usr/share/texlive/texmf-dist/tex/generic/infwarerr/infwarerr.sty +INPUT /usr/share/texlive/texmf-dist/tex/generic/iftex/iftex.sty +INPUT /usr/share/texlive/texmf-dist/tex/generic/iftex/iftex.sty +INPUT /usr/share/texlive/texmf-dist/tex/latex/logreq/logreq.sty +INPUT /usr/share/texlive/texmf-dist/tex/latex/logreq/logreq.sty +INPUT /usr/share/texlive/texmf-dist/tex/latex/logreq/logreq.def +INPUT /usr/share/texlive/texmf-dist/tex/latex/logreq/logreq.def +INPUT /usr/share/texlive/texmf-dist/tex/latex/logreq/logreq.def +INPUT /usr/share/texlive/texmf-dist/tex/latex/base/ifthen.sty +INPUT /usr/share/texlive/texmf-dist/tex/latex/base/ifthen.sty +INPUT /usr/share/texlive/texmf-dist/tex/latex/url/url.sty +INPUT /usr/share/texlive/texmf-dist/tex/latex/url/url.sty +INPUT /usr/share/texlive/texmf-dist/tex/latex/biblatex/blx-dm.def +INPUT /usr/share/texlive/texmf-dist/tex/latex/biblatex/blx-dm.def +INPUT /usr/share/texlive/texmf-dist/tex/latex/biblatex/blx-dm.def +INPUT /usr/share/texlive/texmf-dist/tex/latex/biblatex/blx-compat.def +INPUT /usr/share/texlive/texmf-dist/tex/latex/biblatex/blx-compat.def +INPUT /usr/share/texlive/texmf-dist/tex/latex/biblatex/blx-compat.def +INPUT /usr/share/texlive/texmf-dist/tex/latex/biblatex/biblatex.def +INPUT /usr/share/texlive/texmf-dist/tex/latex/biblatex/biblatex.def +INPUT /usr/share/texlive/texmf-dist/tex/latex/biblatex/biblatex.def +INPUT /usr/share/texlive/texmf-dist/tex/latex/biblatex/bbx/authoryear.bbx +INPUT /usr/share/texlive/texmf-dist/tex/latex/biblatex/bbx/authoryear.bbx +INPUT /usr/share/texlive/texmf-dist/tex/latex/biblatex/bbx/authoryear.bbx +INPUT /usr/share/texlive/texmf-dist/tex/latex/biblatex/bbx/standard.bbx +INPUT /usr/share/texlive/texmf-dist/tex/latex/biblatex/bbx/standard.bbx +INPUT /usr/share/texlive/texmf-dist/tex/latex/biblatex/bbx/standard.bbx +INPUT /usr/share/texlive/texmf-dist/tex/latex/biblatex/cbx/authoryear.cbx +INPUT /usr/share/texlive/texmf-dist/tex/latex/biblatex/cbx/authoryear.cbx +INPUT /usr/share/texlive/texmf-dist/tex/latex/biblatex/cbx/authoryear.cbx +INPUT /usr/share/texlive/texmf-dist/tex/latex/biblatex/biblatex.cfg +INPUT /usr/share/texlive/texmf-dist/tex/latex/biblatex/biblatex.cfg +INPUT /usr/share/texlive/texmf-dist/tex/latex/biblatex/biblatex.cfg +INPUT /usr/share/texlive/texmf-dist/tex/latex/l3kernel/expl3.sty +INPUT /usr/share/texlive/texmf-dist/tex/latex/l3kernel/expl3.sty INPUT /usr/share/texlive/texmf-dist/tex/latex/l3backend/l3backend-pdftex.def INPUT /usr/share/texlive/texmf-dist/tex/latex/l3backend/l3backend-pdftex.def +INPUT /usr/share/texlive/texmf-dist/tex/latex/biblatex/blx-case-expl3.sty +INPUT /usr/share/texlive/texmf-dist/tex/latex/biblatex/blx-case-expl3.sty +INPUT /usr/share/texlive/texmf-dist/tex/latex/l3packages/xparse/xparse.sty +INPUT /usr/share/texlive/texmf-dist/tex/latex/l3packages/xparse/xparse.sty INPUT ./main.aux INPUT ./main.aux INPUT main.aux OUTPUT main.aux +INPUT /usr/share/texlive/texmf-dist/tex/latex/biblatex/lbx/english.lbx +INPUT /usr/share/texlive/texmf-dist/tex/latex/biblatex/lbx/english.lbx +INPUT /usr/share/texlive/texmf-dist/tex/latex/biblatex/lbx/english.lbx +OUTPUT main.bcf +INPUT main.bbl +INPUT ./main.bbl +INPUT ./main.bbl +INPUT ./main.bbl +INPUT main.bbl INPUT /usr/share/texlive/texmf-dist/fonts/tfm/public/cm/cmr17.tfm INPUT /usr/share/texlive/texmf-dist/fonts/tfm/public/cm/cmr12.tfm INPUT /usr/share/texlive/texmf-dist/fonts/tfm/public/cm/cmmi12.tfm INPUT /usr/share/texlive/texmf-dist/fonts/tfm/public/cm/cmsy10.tfm +INPUT /usr/share/texlive/texmf-dist/fonts/tfm/public/cm/cmex10.tfm +INPUT /usr/share/texlive/texmf-dist/fonts/tfm/public/amsfonts/cmextra/cmex7.tfm INPUT /usr/share/texlive/texmf-dist/fonts/tfm/public/cm/cmr17.tfm INPUT /usr/share/texlive/texmf-dist/fonts/tfm/public/cm/cmbx12.tfm INPUT /usr/share/texlive/texmf-dist/fonts/tfm/public/cm/cmr8.tfm @@ -44,10 +109,24 @@ INPUT /usr/share/texlive/texmf-dist/fonts/tfm/public/cm/cmmi6.tfm INPUT /usr/share/texlive/texmf-dist/fonts/tfm/public/cm/cmsy10.tfm INPUT /usr/share/texlive/texmf-dist/fonts/tfm/public/cm/cmsy8.tfm INPUT /usr/share/texlive/texmf-dist/fonts/tfm/public/cm/cmsy6.tfm +INPUT /usr/share/texlive/texmf-dist/fonts/tfm/public/cm/cmex10.tfm +INPUT /usr/share/texlive/texmf-dist/fonts/tfm/public/amsfonts/cmextra/cmex8.tfm +INPUT /usr/share/texlive/texmf-dist/fonts/tfm/public/amsfonts/cmextra/cmex7.tfm OUTPUT main.pdf INPUT /var/lib/texmf/fonts/map/pdftex/updmap/pdftex.map +INPUT /usr/share/texlive/texmf-dist/fonts/tfm/public/cm/cmbx12.tfm +INPUT /usr/share/texlive/texmf-dist/fonts/tfm/public/cm/cmbx12.tfm INPUT main.aux +INPUT main.run.xml +OUTPUT main.run.xml INPUT /usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmbx12.pfb +INPUT /usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmex10.pfb +INPUT /usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmmi12.pfb +INPUT /usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmmi6.pfb +INPUT /usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmmi8.pfb INPUT /usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmr12.pfb INPUT /usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmr17.pfb +INPUT /usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmr6.pfb +INPUT /usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmr8.pfb INPUT /usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmsy10.pfb +INPUT /usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmsy8.pfb diff --git a/main.log b/main.log index 05ac35c..a9c631c 100644 --- a/main.log +++ b/main.log @@ -1,4 +1,4 @@ -This is pdfTeX, Version 3.141592653-2.6-1.40.25 (TeX Live 2023/Debian) (preloaded format=pdflatex 2025.10.28) 3 NOV 2025 14:28 +This is pdfTeX, Version 3.141592653-2.6-1.40.25 (TeX Live 2023/Debian) (preloaded format=pdflatex 2025.10.28) 6 NOV 2025 09:26 entering extended mode restricted \write18 enabled. file:line:error style messages enabled. @@ -37,73 +37,373 @@ Package: kvsetkeys 2022-10-05 v1.19 Key value parser (HO) )) (/usr/share/texlive/texmf-dist/tex/latex/etoolbox/etoolbox.sty Package: etoolbox 2020/10/05 v2.5k e-TeX tools for LaTeX (JAW) \etb@tempcnta=\count195 -)) (/usr/share/texlive/texmf-dist/tex/latex/l3backend/l3backend-pdftex.def +)) (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsmath.sty +Package: amsmath 2023/05/13 v2.17o AMS math features +\@mathmargin=\skip50 + +For additional information on amsmath, use the `?' option. +(/usr/share/texlive/texmf-dist/tex/latex/amsmath/amstext.sty +Package: amstext 2021/08/26 v2.01 AMS text + (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsgen.sty +File: amsgen.sty 1999/11/30 v2.0 generic functions +\@emptytoks=\toks18 +\ex@=\dimen141 +)) (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsbsy.sty +Package: amsbsy 1999/11/29 v1.2d Bold Symbols +\pmbraise@=\dimen142 +) (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsopn.sty +Package: amsopn 2022/04/08 v2.04 operator names +) +\inf@bad=\count196 +LaTeX Info: Redefining \frac on input line 234. +\uproot@=\count197 +\leftroot@=\count198 +LaTeX Info: Redefining \overline on input line 399. +LaTeX Info: Redefining \colon on input line 410. +\classnum@=\count199 +\DOTSCASE@=\count266 +LaTeX Info: Redefining \ldots on input line 496. +LaTeX Info: Redefining \dots on input line 499. +LaTeX Info: Redefining \cdots on input line 620. +\Mathstrutbox@=\box51 +\strutbox@=\box52 +LaTeX Info: Redefining \big on input line 722. +LaTeX Info: Redefining \Big on input line 723. +LaTeX Info: Redefining \bigg on input line 724. +LaTeX Info: Redefining \Bigg on input line 725. +\big@size=\dimen143 +LaTeX Font Info: Redeclaring font encoding OML on input line 743. +LaTeX Font Info: Redeclaring font encoding OMS on input line 744. +\macc@depth=\count267 +LaTeX Info: Redefining \bmod on input line 905. +LaTeX Info: Redefining \pmod on input line 910. +LaTeX Info: Redefining \smash on input line 940. +LaTeX Info: Redefining \relbar on input line 970. +LaTeX Info: Redefining \Relbar on input line 971. +\c@MaxMatrixCols=\count268 +\dotsspace@=\muskip16 +\c@parentequation=\count269 +\dspbrk@lvl=\count270 +\tag@help=\toks19 +\row@=\count271 +\column@=\count272 +\maxfields@=\count273 +\andhelp@=\toks20 +\eqnshift@=\dimen144 +\alignsep@=\dimen145 +\tagshift@=\dimen146 +\tagwidth@=\dimen147 +\totwidth@=\dimen148 +\lineht@=\dimen149 +\@envbody=\toks21 +\multlinegap=\skip51 +\multlinetaggap=\skip52 +\mathdisplay@stack=\toks22 +LaTeX Info: Redefining \[ on input line 2953. +LaTeX Info: Redefining \] on input line 2954. +) (/usr/share/texlive/texmf-dist/tex/latex/biblatex/biblatex.sty +Package: biblatex 2023/03/05 v3.19 programmable bibliographies (PK/MW) + (/usr/share/texlive/texmf-dist/tex/generic/pdftexcmds/pdftexcmds.sty +Package: pdftexcmds 2020-06-27 v0.33 Utility functions of pdfTeX for LuaTeX (HO) + (/usr/share/texlive/texmf-dist/tex/generic/infwarerr/infwarerr.sty +Package: infwarerr 2019/12/03 v1.5 Providing info/warning/error messages (HO) +) (/usr/share/texlive/texmf-dist/tex/generic/iftex/iftex.sty +Package: iftex 2022/02/03 v1.0f TeX engine tests +) +Package pdftexcmds Info: \pdf@primitive is available. +Package pdftexcmds Info: \pdf@ifprimitive is available. +Package pdftexcmds Info: \pdfdraftmode found. +) (/usr/share/texlive/texmf-dist/tex/latex/logreq/logreq.sty +Package: logreq 2010/08/04 v1.0 xml request logger +\lrq@indent=\count274 + (/usr/share/texlive/texmf-dist/tex/latex/logreq/logreq.def +File: logreq.def 2010/08/04 v1.0 logreq spec v1.0 +)) (/usr/share/texlive/texmf-dist/tex/latex/base/ifthen.sty +Package: ifthen 2022/04/13 v1.1d Standard LaTeX ifthen package (DPC) +) (/usr/share/texlive/texmf-dist/tex/latex/url/url.sty +\Urlmuskip=\muskip17 +Package: url 2013/09/16 ver 3.4 Verb mode for urls, etc. +) +\c@tabx@nest=\count275 +\c@listtotal=\count276 +\c@listcount=\count277 +\c@liststart=\count278 +\c@liststop=\count279 +\c@citecount=\count280 +\c@citetotal=\count281 +\c@multicitecount=\count282 +\c@multicitetotal=\count283 +\c@instcount=\count284 +\c@maxnames=\count285 +\c@minnames=\count286 +\c@maxitems=\count287 +\c@minitems=\count288 +\c@citecounter=\count289 +\c@maxcitecounter=\count290 +\c@savedcitecounter=\count291 +\c@uniquelist=\count292 +\c@uniquename=\count293 +\c@refsection=\count294 +\c@refsegment=\count295 +\c@maxextratitle=\count296 +\c@maxextratitleyear=\count297 +\c@maxextraname=\count298 +\c@maxextradate=\count299 +\c@maxextraalpha=\count300 +\c@abbrvpenalty=\count301 +\c@highnamepenalty=\count302 +\c@lownamepenalty=\count303 +\c@maxparens=\count304 +\c@parenlevel=\count305 +\blx@tempcnta=\count306 +\blx@tempcntb=\count307 +\blx@tempcntc=\count308 +\c@blx@maxsection=\count309 +\blx@maxsegment@0=\count310 +\blx@notetype=\count311 +\blx@parenlevel@text=\count312 +\blx@parenlevel@foot=\count313 +\blx@sectionciteorder@0=\count314 +\blx@sectionciteorderinternal@0=\count315 +\blx@entrysetcounter=\count316 +\blx@biblioinstance=\count317 +\labelnumberwidth=\skip53 +\labelalphawidth=\skip54 +\biblabelsep=\skip55 +\bibitemsep=\skip56 +\bibnamesep=\skip57 +\bibinitsep=\skip58 +\bibparsep=\skip59 +\bibhang=\skip60 +\blx@bcfin=\read2 +\blx@bcfout=\write3 +\blx@langwohyphens=\language89 +\c@mincomprange=\count318 +\c@maxcomprange=\count319 +\c@mincompwidth=\count320 +Package biblatex Info: Trying to load biblatex default data model... +Package biblatex Info: ... file 'blx-dm.def' found. + (/usr/share/texlive/texmf-dist/tex/latex/biblatex/blx-dm.def +File: blx-dm.def 2023/03/05 v3.19 biblatex localization (PK/MW) +) +Package biblatex Info: Trying to load biblatex style data model... +Package biblatex Info: ... file 'authoryear.dbx' not found. +Package biblatex Info: Trying to load biblatex custom data model... +Package biblatex Info: ... file 'biblatex-dm.cfg' not found. +\c@afterword=\count321 +\c@savedafterword=\count322 +\c@annotator=\count323 +\c@savedannotator=\count324 +\c@author=\count325 +\c@savedauthor=\count326 +\c@bookauthor=\count327 +\c@savedbookauthor=\count328 +\c@commentator=\count329 +\c@savedcommentator=\count330 +\c@editor=\count331 +\c@savededitor=\count332 +\c@editora=\count333 +\c@savededitora=\count334 +\c@editorb=\count335 +\c@savededitorb=\count336 +\c@editorc=\count337 +\c@savededitorc=\count338 +\c@foreword=\count339 +\c@savedforeword=\count340 +\c@holder=\count341 +\c@savedholder=\count342 +\c@introduction=\count343 +\c@savedintroduction=\count344 +\c@namea=\count345 +\c@savednamea=\count346 +\c@nameb=\count347 +\c@savednameb=\count348 +\c@namec=\count349 +\c@savednamec=\count350 +\c@translator=\count351 +\c@savedtranslator=\count352 +\c@shortauthor=\count353 +\c@savedshortauthor=\count354 +\c@shorteditor=\count355 +\c@savedshorteditor=\count356 +\c@labelname=\count357 +\c@savedlabelname=\count358 +\c@institution=\count359 +\c@savedinstitution=\count360 +\c@lista=\count361 +\c@savedlista=\count362 +\c@listb=\count363 +\c@savedlistb=\count364 +\c@listc=\count365 +\c@savedlistc=\count366 +\c@listd=\count367 +\c@savedlistd=\count368 +\c@liste=\count369 +\c@savedliste=\count370 +\c@listf=\count371 +\c@savedlistf=\count372 +\c@location=\count373 +\c@savedlocation=\count374 +\c@organization=\count375 +\c@savedorganization=\count376 +\c@origlocation=\count377 +\c@savedoriglocation=\count378 +\c@origpublisher=\count379 +\c@savedorigpublisher=\count380 +\c@publisher=\count381 +\c@savedpublisher=\count382 +\c@language=\count383 +\c@savedlanguage=\count384 +\c@origlanguage=\count385 +\c@savedoriglanguage=\count386 +\c@pageref=\count387 +\c@savedpageref=\count388 +\shorthandwidth=\skip61 +\shortjournalwidth=\skip62 +\shortserieswidth=\skip63 +\shorttitlewidth=\skip64 +\shortauthorwidth=\skip65 +\shorteditorwidth=\skip66 +\locallabelnumberwidth=\skip67 +\locallabelalphawidth=\skip68 +\localshorthandwidth=\skip69 +\localshortjournalwidth=\skip70 +\localshortserieswidth=\skip71 +\localshorttitlewidth=\skip72 +\localshortauthorwidth=\skip73 +\localshorteditorwidth=\skip74 +Package biblatex Info: Trying to load compatibility code... +Package biblatex Info: ... file 'blx-compat.def' found. + (/usr/share/texlive/texmf-dist/tex/latex/biblatex/blx-compat.def +File: blx-compat.def 2023/03/05 v3.19 biblatex compatibility (PK/MW) +) +Package biblatex Info: Trying to load generic definitions... +Package biblatex Info: ... file 'biblatex.def' found. + (/usr/share/texlive/texmf-dist/tex/latex/biblatex/biblatex.def +File: biblatex.def 2023/03/05 v3.19 biblatex compatibility (PK/MW) +\c@textcitecount=\count389 +\c@textcitetotal=\count390 +\c@textcitemaxnames=\count391 +\c@biburlbigbreakpenalty=\count392 +\c@biburlbreakpenalty=\count393 +\c@biburlnumpenalty=\count394 +\c@biburlucpenalty=\count395 +\c@biburllcpenalty=\count396 +\biburlbigskip=\muskip18 +\biburlnumskip=\muskip19 +\biburlucskip=\muskip20 +\biburllcskip=\muskip21 +\c@smartand=\count397 +) +Package biblatex Info: Trying to load bibliography style 'authoryear'... +Package biblatex Info: ... file 'authoryear.bbx' found. + (/usr/share/texlive/texmf-dist/tex/latex/biblatex/bbx/authoryear.bbx +File: authoryear.bbx 2023/03/05 v3.19 biblatex bibliography style (PK/MW) +Package biblatex Info: Trying to load bibliography style 'standard'... +Package biblatex Info: ... file 'standard.bbx' found. + (/usr/share/texlive/texmf-dist/tex/latex/biblatex/bbx/standard.bbx +File: standard.bbx 2023/03/05 v3.19 biblatex bibliography style (PK/MW) +\c@bbx:relatedcount=\count398 +\c@bbx:relatedtotal=\count399 +)) +Package biblatex Info: Trying to load citation style 'authoryear'... +Package biblatex Info: ... file 'authoryear.cbx' found. + (/usr/share/texlive/texmf-dist/tex/latex/biblatex/cbx/authoryear.cbx +File: authoryear.cbx 2023/03/05 v3.19 biblatex citation style (PK/MW) +Package biblatex Info: Redefining '\cite'. +Package biblatex Info: Redefining '\parencite'. +Package biblatex Info: Redefining '\footcite'. +Package biblatex Info: Redefining '\footcitetext'. +Package biblatex Info: Redefining '\smartcite'. +Package biblatex Info: Redefining '\textcite'. +Package biblatex Info: Redefining '\textcites'. +) +Package biblatex Info: Trying to load configuration file... +Package biblatex Info: ... file 'biblatex.cfg' found. + (/usr/share/texlive/texmf-dist/tex/latex/biblatex/biblatex.cfg +File: biblatex.cfg +) +Package biblatex Info: Input encoding 'utf8' detected. +Package biblatex Info: Document encoding is UTF8 .... + (/usr/share/texlive/texmf-dist/tex/latex/l3kernel/expl3.sty +Package: expl3 2024-01-22 L3 programming layer (loader) + (/usr/share/texlive/texmf-dist/tex/latex/l3backend/l3backend-pdftex.def File: l3backend-pdftex.def 2024-01-04 L3 backend support: PDF output (pdfTeX) -\l__color_backend_stack_int=\count196 -\l__pdf_internal_box=\box51 -) (./main.aux) +\l__color_backend_stack_int=\count400 +\l__pdf_internal_box=\box53 +)) +Package biblatex Info: ... and expl3 +(biblatex) 2024-01-22 L3 programming layer (loader) +(biblatex) is new enough (at least 2020/04/06), +(biblatex) setting 'casechanger=expl3'. + (/usr/share/texlive/texmf-dist/tex/latex/biblatex/blx-case-expl3.sty (/usr/share/texlive/texmf-dist/tex/latex/l3packages/xparse/xparse.sty +Package: xparse 2023-10-10 L3 Experimental document command parser +) +Package: blx-case-expl3 2023/03/05 v3.19 expl3 case changing code for biblatex +)) +\@quotelevel=\count401 +\@quotereset=\count402 + (./main.aux) \openout1 = `main.aux'. -LaTeX Font Info: Checking defaults for OML/cmm/m/it on input line 9. -LaTeX Font Info: ... okay on input line 9. -LaTeX Font Info: Checking defaults for OMS/cmsy/m/n on input line 9. -LaTeX Font Info: ... okay on input line 9. -LaTeX Font Info: Checking defaults for OT1/cmr/m/n on input line 9. -LaTeX Font Info: ... okay on input line 9. -LaTeX Font Info: Checking defaults for T1/cmr/m/n on input line 9. -LaTeX Font Info: ... okay on input line 9. -LaTeX Font Info: Checking defaults for TS1/cmr/m/n on input line 9. -LaTeX Font Info: ... okay on input line 9. -LaTeX Font Info: Checking defaults for OMX/cmex/m/n on input line 9. -LaTeX Font Info: ... okay on input line 9. -LaTeX Font Info: Checking defaults for U/cmr/m/n on input line 9. -LaTeX Font Info: ... okay on input line 9. -LaTeX Font Info: External font `cmex10' loaded for size -(Font) <14.4> on input line 10. -LaTeX Font Info: External font `cmex10' loaded for size -(Font) <7> on input line 10. -LaTeX Font Info: External font `cmex10' loaded for size -(Font) <12> on input line 18. -LaTeX Font Info: External font `cmex10' loaded for size -(Font) <8> on input line 18. -LaTeX Font Info: External font `cmex10' loaded for size -(Font) <6> on input line 18. +LaTeX Font Info: Checking defaults for OML/cmm/m/it on input line 15. +LaTeX Font Info: ... okay on input line 15. +LaTeX Font Info: Checking defaults for OMS/cmsy/m/n on input line 15. +LaTeX Font Info: ... okay on input line 15. +LaTeX Font Info: Checking defaults for OT1/cmr/m/n on input line 15. +LaTeX Font Info: ... okay on input line 15. +LaTeX Font Info: Checking defaults for T1/cmr/m/n on input line 15. +LaTeX Font Info: ... okay on input line 15. +LaTeX Font Info: Checking defaults for TS1/cmr/m/n on input line 15. +LaTeX Font Info: ... okay on input line 15. +LaTeX Font Info: Checking defaults for OMX/cmex/m/n on input line 15. +LaTeX Font Info: ... okay on input line 15. +LaTeX Font Info: Checking defaults for U/cmr/m/n on input line 15. +LaTeX Font Info: ... okay on input line 15. +Package biblatex Info: Trying to load language 'english'... +Package biblatex Info: ... file 'english.lbx' found. + (/usr/share/texlive/texmf-dist/tex/latex/biblatex/lbx/english.lbx +File: english.lbx 2023/03/05 v3.19 biblatex localization (PK/MW) +) +Package biblatex Info: Input encoding 'utf8' detected. +Package biblatex Info: Automatic encoding selection. +(biblatex) Assuming data encoding 'utf8'. +\openout3 = `main.bcf'. -Overfull \hbox (3.81674pt too wide) in paragraph at lines 36--43 +Package biblatex Info: Trying to load bibliographic data... +Package biblatex Info: ... file 'main.bbl' found. + (./main.bbl) +Package biblatex Info: Reference section=0 on input line 15. +Package biblatex Info: Reference segment=0 on input line 15. + +Overfull \hbox (3.81674pt too wide) in paragraph at lines 50--57 \OT1/cmr/m/n/12 2)...compensate for be-hav-iorally non-informative song vari-abil-ity (in-vari-ances) [] [1 -{/var/lib/texmf/fonts/map/pdftex/updmap/pdftex.map}] -Overfull \hbox (19.14377pt too wide) in paragraph at lines 56--56 -[]\OT1/cmr/bx/n/17.28 Pre-split path-way: Pop-u-la-tion pre-processing - [] - - -Overfull \hbox (0.58345pt too wide) in paragraph at lines 71--75 -\OT1/cmr/m/n/12 - Path-way split-ting: Sin-gle pop-u-la-tion re-sponse into sev-eral sep-a-rate branches - [] - -[2] [3] (./main.aux) +{/var/lib/texmf/fonts/map/pdftex/updmap/pdftex.map}] [2] [3] [4] (./main.aux) *********** LaTeX2e <2023-11-01> patch level 1 L3 programming layer <2024-01-22> *********** +Package logreq Info: Writing requests to 'main.run.xml'. +\openout1 = `main.run.xml'. + ) Here is how much of TeX's memory you used: - 1192 strings out of 474222 - 20019 string characters out of 5748732 - 1928975 words of memory out of 5000000 - 23493 multiletter control sequences out of 15000+600000 - 562623 words of font info for 51 fonts, out of 8000000 for 9000 + 9318 strings out of 474222 + 177863 string characters out of 5748732 + 1930975 words of memory out of 5000000 + 31530 multiletter control sequences out of 15000+600000 + 564362 words of font info for 58 fonts, out of 8000000 for 9000 1141 hyphenation exceptions out of 8191 - 57i,6n,65p,533b,193s stack positions out of 10000i,1000n,20000p,200000b,200000s - -Output written on main.pdf (3 pages, 58581 bytes). + 66i,7n,81p,713b,973s stack positions out of 10000i,1000n,20000p,200000b,200000s + +Output written on main.pdf (4 pages, 129427 bytes). PDF statistics: - 34 PDF objects out of 1000 (max. 8388607) - 20 compressed objects within 1 object stream + 72 PDF objects out of 1000 (max. 8388607) + 43 compressed objects within 1 object stream 0 named destinations out of 1000 (max. 500000) 1 words of extra memory for PDF output out of 10000 (max. 10000000) diff --git a/main.pdf b/main.pdf index eb49cef..f453d89 100644 Binary files a/main.pdf and b/main.pdf differ diff --git a/main.run.xml b/main.run.xml new file mode 100644 index 0000000..a2ccca6 --- /dev/null +++ b/main.run.xml @@ -0,0 +1,85 @@ + + + + + + + + + + + + + + + + + + + + + + + + +]> + + + latex + + main.bcf + + + main.bbl + + + blx-dm.def + blx-compat.def + biblatex.def + standard.bbx + authoryear.bbx + authoryear.cbx + biblatex.cfg + english.lbx + + + + biber + + biber + main + + + main.bcf + + + main.bbl + + + main.bbl + + + main.bcf + + + cite.bib + + + diff --git a/main.synctex.gz b/main.synctex.gz index 8e04a54..2ccf006 100644 Binary files a/main.synctex.gz and b/main.synctex.gz differ diff --git a/main.tex b/main.tex index e7bcbcf..9d136f7 100644 --- a/main.tex +++ b/main.tex @@ -1,14 +1,28 @@ \documentclass[a4paper, 12pt]{article} \usepackage{parskip} +\usepackage{amsmath} +\usepackage[ +backend=biber, +style=authoryear, +]{biblatex} +\addbibresource{cite.bib} -\title{Physiologically inspired model of the grasshopper auditory system} +\title{Emergent intensity invariance in a physiologically inspired model of the grasshopper auditory system} \author{Jona Hartling, Jan Benda} \date{} \begin{document} \maketitle{} +\newcommand{\bp}{h_{\text{BP}}(t)} % Bandpass filter function +\newcommand{\lp}{h_{\text{LP}}(t)} % Lowpass filter function +\newcommand{\hp}{h_{\text{HP}}(t)} % Highpass filter function +\newcommand{\fc}{f_{\text{cut}}} % Filter cutoff frequency +\newcommand{\infint}{\int_{-\infty}^{\infty}} % Indefinite integral +\newcommand{\bi}{b_\theta} +\newcommand{\feat}{f_\theta} + \section{The sensory world of a grasshopper} Strong dependence on acoustic signals for ranged communication\\ @@ -53,39 +67,108 @@ How can a human observer conceive a grasshopper's auditory percepts?\\ - How to integrate the available knowledge on anatomy, physiology, ethology?\\ $\rightarrow$ Abstract, simplify, formalize $\rightarrow$ Functional model framework -\section{Pre-split pathway: Population pre-processing} + +\section{Developing a functional model of\\the grasshopper auditory pathway} + + +\subsection{Population-driven signal pre-processing} + +"Pre-split portion" of the auditory pathway:\\ +Tympanal membrane $\rightarrow$ Receptor neurons $\rightarrow$ Local interneurons + +Similar response/filter properties within receptor/interneuron populations (\cite{clemens2011})\\ +$\rightarrow$ One population-wide response trace per stage (no "single-cell resolution") + +\textbf{Stage-specific processing steps and functional approximations:} + +Initial: Continuous acoustic input signal $x(t)$ + Filtering of behaviorally relevant frequencies by tympanal membrane\\ -- Bandpass 5-30 kHz +$\rightarrow$ Bandpass filter 5-30 kHz +\begin{equation} + x(t)\,*\,\bp; \quad\quad \fc\,=\,5\,\text{kHz},\,30\,\text{kHz} +\end{equation} Extraction of signal envelope (AM encoding) by receptor population\\ -- Full-wave rectification + lowpass 500 Hz +$\rightarrow$ Full-wave rectification, then lowpass filter 500 Hz +\begin{equation} + |x(t)|\,*\,\lp; \quad\quad \fc\,=\,500\,\text{Hz} +\end{equation} Logarithmically compressed intensity tuning curve of receptors\\ -- Decibel transformation +$\rightarrow$ Decibel transformation +\begin{equation} + 20\,\cdot\,\log_{10} \frac{x(t)}{x_{\text{max}}} +\end{equation} Spike-frequency adaptation in receptor and interneuron populations\\ -- Highpass 10 Hz +$\rightarrow$ Highpass filter 10 Hz +\begin{equation} + x(t)\,*\,\hp; \quad\quad \fc\,=\,10\,\text{Hz} +\end{equation} -\section{Post-split pathway: Feature extraction} -Template matching by individual ascending neurons\\ -- Separate convolution with each of a set of Gabor kernels\\ -- Pathway splitting: Single population response into several separate branches -- Expansion into a higher-dimensional sound representation +\subsection{Feature extraction by individual neurons} + +"Post-split portion" of the auditory pathway:\\ +Ascending neurons (AN) $\rightarrow$ Central brain neurons + +Diverse response/filter properties within AN population (\cite{clemens2011})\\ +- Pathway splitting into several parallel branches\\ +- Expansion into a decorrelated higher-dimensional sound representation\\ +$\rightarrow$ Individual neuron-specific response traces from this stage onwards + +\textbf{Stage-specific processing steps and functional approximations:} + +Template matching by individual ANs\\ +- Filter base (STA approximations): Set of Gabor kernels\\ +- Gabor parameters: $\sigma, \phi, f$ $\rightarrow$ Determines kernel sign and lobe number +\begin{equation} + k(t)\,=\,e^{-\frac{t^{2}}{2\sigma^{2}}}\,\cdot\,\sin(2\pi f t\,+\,\phi) +\end{equation} +$\rightarrow$ Separate convolution with each member of the kernel set +\begin{equation} + c_i(t)\,=\,x(t)\,*\,k_i(t) + = \infint x(\tau)\,\cdot\,k_i(t\,-\,\tau)\,d\tau +\end{equation} Thresholding nonlinearity in ascending neurons (or further downstream)\\ -- Step-function (or sigmoid) threshold\\ -- Binarization of response values into "relevant" vs. "irrelevant" +- Binarization of AN response traces into "relevant" vs. "irrelevant"\\ +$\rightarrow$ Heaviside step-function $H(c\,-\,\theta)$ (or steep sigmoid threshold?) +\begin{equation} + \bi(t)\,=\,\begin{cases} + \;1, \quad c(t)\,\geq\,\theta\\ + \;0, \quad c(t)\,<\,\theta + \end{cases} +\end{equation} Temporal averaging by neurons of the central brain\\ -- Lowpass 1 Hz\\ -- Finalized set of slowly changing kernel-specific features\\ -- Different (species-specific) songs are characterized by a distinct combination of feature values +- Finalized set of slowly changing kernel-specific features (one per AN)\\ +- Different species-specific song patterns are characterized by a distinct combination +of feature values $\rightarrow$ Clusters in high-dimensional feature space\\ +$\rightarrow$ Lowpass filter 1 Hz +\begin{equation} + \feat(t)\,=\,\bi(t)\,*\,\lp; \quad\quad \fc\,=\,1\,\text{Hz} +\end{equation} -\section{Pre-split intensity invariance:\\Logarithm-highpass mechanism} -\section{Post-split intensity invariance:\\Threshold-lowpass mechanism} +\section{Two mechanisms driving the emergence of intensity-invariant song representation} -\section{Conclusion and outlook} + +\subsection{Logarithmic scaling \& spike-frequency adaptation} + +Song signal $s(t)$ with variable scale $\alpha$ and fixed-scale additive noise $\eta(t)$ +\begin{equation} + \alpha\,\cdot\,s(t)\,+\,\eta(t) +\end{equation} + + +\subsection{Threshold nonlinearity \& temporal averaging} + + +\section{Discriminating species-specific song\\patterns in feature space} + + +\section{Conclusions \& outlook} \end{document} \ No newline at end of file