diff --git a/.gitignore b/.gitignore new file mode 100644 index 0000000..07f43b8 --- /dev/null +++ b/.gitignore @@ -0,0 +1 @@ +data/* \ No newline at end of file diff --git a/cite.bib b/cite.bib index 2c7559f..44e88a1 100644 --- a/cite.bib +++ b/cite.bib @@ -706,6 +706,17 @@ publisher={Springer} }# Cited +@article{stumpner1991auditory, + title={Auditory interneurones in the metathoracic ganglion of the grasshopper Chorthippus biguttulus: I. Morphological and physiological characterization}, + author={Stumpner, Andreas and Ronacher, Bernhard}, + journal={Journal of Experimental Biology}, + volume={158}, + number={1}, + pages={391--410}, + year={1991}, + publisher={The Company of Biologists Ltd} +}# Cited + @article{stumpner1994song, title={{Song production and song recognition in a group of sibling grasshopper species (Chorthippus dorsatus, Ch. dichrous and Ch. loratus: Orthoptera, Acrididae)}}, author={Stumpner, Andreas and von Helversen, Otto}, @@ -715,6 +726,17 @@ year={1994}, }# Cited +@article{stumpner1994neurophysiological, + title={Neurophysiological aspects of song pattern recognition and sound localization in grasshoppers}, + author={Stumpner, Andreas and Ronacher, Bernhard}, + journal={American zoologist}, + volume={34}, + number={6}, + pages={696--705}, + year={1994}, + publisher={Oxford University Press UK} +} + @article{suga1960peripheral, title={Peripheral mechanism of hearing in locust}, author={Suga, Nobuo}, diff --git a/literature/Stumpner_Ronacher_1994.pdf b/literature/Stumpner_Ronacher_1994.pdf new file mode 100644 index 0000000..ab3a69b Binary files /dev/null and b/literature/Stumpner_Ronacher_1994.pdf differ diff --git a/main.aux b/main.aux index 8d60e5b..f554375 100644 --- a/main.aux +++ b/main.aux @@ -1,5 +1,8 @@ \relax \providecommand{\transparent@use}[1]{} +\providecommand\babel@aux[2]{} +\@nameuse{bbl@beforestart} +\catcode `"\active \abx@aux@refcontext{nyt/global//global/global} \abx@aux@cite{0}{helversen1972gesang} \abx@aux@segm{0}{0}{helversen1972gesang} @@ -33,6 +36,7 @@ \abx@aux@segm{0}{0}{ronacher1986routes} \abx@aux@cite{0}{helversen1988interaural} \abx@aux@segm{0}{0}{helversen1988interaural} +\babel@aux{english}{} \@writefile{toc}{\contentsline {section}{\numberline {1}Exploring a grasshopper's sensory world}{1}{}\protected@file@percent } \abx@aux@page{1}{1} \abx@aux@page{2}{1} @@ -221,24 +225,35 @@ \@writefile{toc}{\contentsline {subsection}{\numberline {2.2}Feature extraction by individual neurons}{7}{}\protected@file@percent } \newlabel{eq:conv}{{5}{8}{}{}{}} \newlabel{eq:gabor}{{6}{8}{}{}{}} -\newlabel{eq:gabor_phase}{{9}{8}{}{}{}} -\@writefile{lot}{\contentsline {table}{\numberline {1}{\ignorespaces \relax }}{8}{}\protected@file@percent } -\newlabel{tab:gabor_phase}{{1}{8}{}{}{}} -\newlabel{eq:binary}{{10}{9}{}{}{}} -\newlabel{eq:lowpass}{{11}{9}{}{}{}} +\abx@aux@cite{0}{ronacher1986routes} +\abx@aux@segm{0}{0}{ronacher1986routes} +\abx@aux@cite{0}{bauer1987separate} +\abx@aux@segm{0}{0}{bauer1987separate} +\abx@aux@cite{0}{bhavsar2017brain} +\abx@aux@segm{0}{0}{bhavsar2017brain} +\@writefile{lot}{\contentsline {table}{\numberline {1}{\ignorespaces Values of phase $\phi $ that are specific for the four major groups of Gabor kernels.}}{9}{}\protected@file@percent } +\newlabel{tab:gabor_phases}{{1}{9}{}{}{}} +\newlabel{eq:binary}{{9}{9}{}{}{}} +\abx@aux@page{70}{9} +\abx@aux@page{71}{9} +\abx@aux@page{72}{9} +\newlabel{eq:lowpass}{{10}{9}{}{}{}} \@writefile{toc}{\contentsline {section}{\numberline {3}Two mechanisms driving the emergence of intensity-invariant song representation}{9}{}\protected@file@percent } -\@writefile{toc}{\contentsline {subsection}{\numberline {3.1}Logarithmic scaling \& spike-frequency adaptation}{9}{}\protected@file@percent } -\newlabel{eq:toy_env}{{12}{10}{}{}{}} -\newlabel{eq:toy_snr}{{13}{10}{}{}{}} -\newlabel{eq:toy_log}{{14}{10}{}{}{}} -\newlabel{eq:toy_highpass}{{15}{10}{}{}{}} +\@writefile{toc}{\contentsline {subsection}{\numberline {3.1}Logarithmic scaling \& spike-frequency adaptation}{10}{}\protected@file@percent } +\newlabel{eq:toy_env}{{11}{10}{}{}{}} +\newlabel{eq:toy_snr}{{12}{10}{}{}{}} +\newlabel{eq:toy_log}{{13}{10}{}{}{}} +\newlabel{eq:toy_highpass}{{14}{11}{}{}{}} \@writefile{toc}{\contentsline {subsection}{\numberline {3.2}Threshold nonlinearity \& temporal averaging}{11}{}\protected@file@percent } -\newlabel{eq:pdf_split}{{16}{11}{}{}{}} -\newlabel{eq:pdf}{{17}{11}{}{}{}} -\newlabel{eq:feat_avg}{{18}{11}{}{}{}} -\newlabel{eq:feat_prop}{{19}{12}{}{}{}} +\newlabel{eq:pdf_split}{{15}{11}{}{}{}} +\newlabel{eq:pdf}{{16}{11}{}{}{}} +\newlabel{eq:feat_avg}{{17}{12}{}{}{}} +\newlabel{eq:feat_prop}{{18}{12}{}{}{}} +\abx@aux@cite{0}{stumpner1991auditory} +\abx@aux@segm{0}{0}{stumpner1991auditory} \@writefile{toc}{\contentsline {section}{\numberline {4}Discriminating species-specific song\\patterns in feature space}{13}{}\protected@file@percent } \@writefile{toc}{\contentsline {section}{\numberline {5}Conclusions \& outlook}{13}{}\protected@file@percent } +\abx@aux@page{73}{13} \gdef\svg@ink@ver@settings{{\m@ne }{inkscape}{\m@ne }} -\abx@aux@read@bbl@mdfivesum{57AF6218181E1F5D094BD77E848A7130} +\abx@aux@read@bbl@mdfivesum{1380DC8C93D2855FDB132CC5A40AD52F} \gdef \@abspage@last{13} diff --git a/main.bbl b/main.bbl index 2f86c18..3536320 100644 --- a/main.bbl +++ b/main.bbl @@ -1951,19 +1951,19 @@ \range{pages}{10} \endentry \entry{stumpner1994song}{article}{} - \name{author}{2}{}{% + \name{author}{2}{ul=2}{% {{un=0,uniquepart=base,hash=a7bef35fb61ea64e0f04d6c87e5aa622}{% family={Stumpner}, familyi={S\bibinitperiod}, given={Andreas}, giveni={A\bibinitperiod}, givenun=0}}% - {{un=0,uniquepart=base,hash=ecb958a09c71420bd1e10f3fee8c24ac}{% + {{un=1,uniquepart=given,hash=ecb958a09c71420bd1e10f3fee8c24ac}{% family={Helversen}, familyi={H\bibinitperiod}, given={Otto}, giveni={O\bibinitperiod}, - givenun=0, + givenun=1, prefix={von}, prefixi={v\bibinitperiod}, prefixun=0}}% @@ -1987,6 +1987,44 @@ \field{pages}{1\bibrangedash 23} \range{pages}{23} \endentry + \entry{stumpner1991auditory}{article}{} + \name{author}{2}{ul=2}{% + {{un=0,uniquepart=base,hash=a7bef35fb61ea64e0f04d6c87e5aa622}{% + family={Stumpner}, + familyi={S\bibinitperiod}, + given={Andreas}, + giveni={A\bibinitperiod}, + givenun=0}}% + {{un=0,uniquepart=base,hash=4ce9349f95ced7a4831a5efa0fe5b00f}{% + family={Ronacher}, + familyi={R\bibinitperiod}, + given={Bernhard}, + giveni={B\bibinitperiod}, + givenun=0}}% + } + \list{publisher}{1}{% + {The Company of Biologists Ltd}% + } + \strng{namehash}{c6b9dac84d9d74ba87037123f4e21034} + \strng{fullhash}{c6b9dac84d9d74ba87037123f4e21034} + \strng{bibnamehash}{c6b9dac84d9d74ba87037123f4e21034} + \strng{authorbibnamehash}{c6b9dac84d9d74ba87037123f4e21034} + \strng{authornamehash}{c6b9dac84d9d74ba87037123f4e21034} + \strng{authorfullhash}{c6b9dac84d9d74ba87037123f4e21034} + \field{sortinit}{S} + \field{sortinithash}{b164b07b29984b41daf1e85279fbc5ab} + \field{extradatescope}{labelyear} + \field{labeldatesource}{} + \field{labelnamesource}{author} + \field{labeltitlesource}{title} + \field{journaltitle}{Journal of Experimental Biology} + \field{number}{1} + \field{title}{Auditory interneurones in the metathoracic ganglion of the grasshopper Chorthippus biguttulus: I. 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issuetitleaddon - language - note - number - pubstate - series - subtitle - title - titleaddon - volume - yeardivision - - - mvproceedings - addendum - editor - editortype - eventday - eventendday - eventendhour - eventendminute - eventendmonth - eventendsecond - eventendtimezone - eventendyear - eventendyeardivision - eventhour - eventminute - eventmonth - eventsecond - eventtimezone - eventyear - eventyeardivision - eventtitle - eventtitleaddon - isbn - language - location - note - number - organization - pagetotal - publisher - pubstate - series - subtitle - title - titleaddon - venue - volumes - - - proceedings - addendum - chapter - editor - editortype - eid - eventday - eventendday - eventendhour - eventendminute - eventendmonth - eventendsecond - eventendtimezone - eventendyear - eventendyeardivision - eventhour - eventminute - eventmonth - eventsecond - eventtimezone - eventyear - eventyeardivision - eventtitle - eventtitleaddon - isbn - language - location - mainsubtitle - maintitle - maintitleaddon - note - number - organization - pages - pagetotal - part - publisher - pubstate - series - subtitle - title - titleaddon - venue - volume - volumes - - - inproceedings - addendum - author - booksubtitle - booktitle - booktitleaddon - chapter - editor - editortype - eid - eventday - eventendday - eventendhour - eventendminute - eventendmonth - eventendsecond - eventendtimezone - eventendyear - eventendyeardivision - eventhour - eventminute - eventmonth - eventsecond - eventtimezone - eventyear - eventyeardivision - eventtitle - eventtitleaddon - isbn - language - location - mainsubtitle - maintitle - maintitleaddon - note - number - organization - pages - part - publisher - pubstate - series - subtitle - title - titleaddon - venue - volume - volumes - - - report - addendum - author - chapter - eid - institution - isrn - language - location - note - number - pages - pagetotal - pubstate - subtitle - title - titleaddon - type - version - - - thesis - addendum - author - chapter - eid - institution - language - location - note - pages - pagetotal - pubstate - subtitle - title - titleaddon - type - - - unpublished - addendum - author - eventday - eventendday - eventendhour - eventendminute - eventendmonth - eventendsecond - eventendtimezone - eventendyear - eventendyeardivision - eventhour - eventminute - eventmonth - eventsecond - eventtimezone - eventyear - eventyeardivision - eventtitle - eventtitleaddon - howpublished - language - location - note - pubstate - subtitle - title - titleaddon - type - venue - - - abstract - addendum - afterword - annotator - author - bookauthor - booksubtitle - booktitle - booktitleaddon - chapter - commentator - editor - editora - editorb - editorc - foreword - holder - institution - introduction - issuesubtitle - issuetitle - issuetitleaddon - journalsubtitle - journaltitle - journaltitleaddon - location - mainsubtitle - maintitle - maintitleaddon - nameaddon - note - organization - origlanguage - origlocation - origpublisher - origtitle - part - publisher - relatedstring - series - shortauthor - shorteditor - shorthand - shortjournal - shortseries - shorttitle - sortname - sortshorthand - sorttitle - subtitle - title - titleaddon - translator - venue - - - article - book - inbook - bookinbook - suppbook - booklet - collection - incollection - suppcollection - manual - misc - mvbook - mvcollection - online - patent - periodical - suppperiodical - proceedings - inproceedings - reference - inreference - report - set - thesis - unpublished - - - date - year - - - - - set - - entryset - - - - article - - author - journaltitle - title - - - - book - mvbook - - author - title - - - - inbook - bookinbook - suppbook - - author - title - booktitle - - - - booklet - - - author - editor - - title - - - - collection - reference - mvcollection - mvreference - - editor - title - - - - incollection - suppcollection - inreference - - author - editor - title - booktitle - - - - dataset - - title - - - - manual - - title - - - - misc - software - - title - - - - online - - title - - url - doi - eprint - - - - - patent - - author - title - number - - - - periodical - - editor - title - - - - proceedings - mvproceedings - - title - - - - inproceedings - - author - title - booktitle - - - - report - - author - title - type - institution - - - - thesis - - author - title - type - institution - - - - unpublished - - author - title - - - - - isbn - - - issn - - - ismn - - - gender - - - - - - - cite.bib - - diff --git a/main.blg b/main.blg index 2ace190..dbf97cd 100644 --- a/main.blg +++ b/main.blg @@ -1,70 +1,71 @@ [0] Config.pm:307> INFO - This is Biber 2.19 [0] Config.pm:310> INFO - Logfile is 'main.blg' -[34] biber:340> INFO - === Mi Feb 11, 2026, 16:04:58 -[41] Biber.pm:419> INFO - Reading 'main.bcf' -[68] Biber.pm:979> INFO - Found 54 citekeys in bib section 0 +[35] biber:340> INFO - === Do Feb 12, 2026, 15:55:36 +[42] Biber.pm:419> INFO - Reading 'main.bcf' +[69] Biber.pm:979> INFO - Found 55 citekeys in bib section 0 [74] Biber.pm:4419> INFO - Processing section 0 [78] Biber.pm:4610> INFO - Looking for bibtex file 'cite.bib' for section 0 [80] bibtex.pm:1713> INFO - LaTeX decoding ... -[109] bibtex.pm:1519> INFO - Found BibTeX data source 'cite.bib' -[281] UCollate.pm:68> INFO - Overriding locale 'en-US' defaults 'normalization = NFD' with 'normalization = prenormalized' -[281] UCollate.pm:68> INFO - Overriding locale 'en-US' defaults 'variable = shifted' with 'variable = non-ignorable' -[281] Biber.pm:4239> INFO - Sorting list 'nyt/global//global/global' of type 'entry' with template 'nyt' and locale 'en-US' -[281] Biber.pm:4245> INFO - No sort tailoring available for locale 'en-US' -[303] bbl.pm:660> INFO - Writing 'main.bbl' with encoding 'UTF-8' -[313] bbl.pm:763> INFO - Output to main.bbl -[313] Biber.pm:131> WARN - BibTeX subsystem: /tmp/biber_tmp_y05O/347c261ec4135a5723bef5c751f5078f_138527.utf8, line 10, warning: 6 characters of junk seen at toplevel -[313] Biber.pm:131> WARN - BibTeX subsystem: /tmp/biber_tmp_y05O/347c261ec4135a5723bef5c751f5078f_138527.utf8, line 21, warning: 6 characters of junk seen at toplevel -[313] Biber.pm:131> WARN - BibTeX subsystem: /tmp/biber_tmp_y05O/347c261ec4135a5723bef5c751f5078f_138527.utf8, line 38, warning: 6 characters of junk seen at toplevel -[313] Biber.pm:131> WARN - BibTeX subsystem: /tmp/biber_tmp_y05O/347c261ec4135a5723bef5c751f5078f_138527.utf8, line 49, warning: 6 characters of junk seen at toplevel -[313] Biber.pm:131> WARN - BibTeX subsystem: /tmp/biber_tmp_y05O/347c261ec4135a5723bef5c751f5078f_138527.utf8, line 58, warning: 6 characters of junk seen at toplevel -[313] Biber.pm:131> WARN - BibTeX subsystem: /tmp/biber_tmp_y05O/347c261ec4135a5723bef5c751f5078f_138527.utf8, line 73, warning: 6 characters of junk seen at toplevel -[313] Biber.pm:131> WARN - BibTeX subsystem: /tmp/biber_tmp_y05O/347c261ec4135a5723bef5c751f5078f_138527.utf8, line 82, warning: 6 characters of junk seen at toplevel -[313] Biber.pm:131> WARN - BibTeX subsystem: /tmp/biber_tmp_y05O/347c261ec4135a5723bef5c751f5078f_138527.utf8, line 91, warning: 6 characters of junk seen at toplevel -[313] Biber.pm:131> WARN - BibTeX subsystem: /tmp/biber_tmp_y05O/347c261ec4135a5723bef5c751f5078f_138527.utf8, line 100, warning: 6 characters of junk seen at toplevel -[313] Biber.pm:131> WARN - BibTeX subsystem: /tmp/biber_tmp_y05O/347c261ec4135a5723bef5c751f5078f_138527.utf8, line 109, warning: 6 characters of junk seen at toplevel -[313] Biber.pm:131> WARN - BibTeX subsystem: /tmp/biber_tmp_y05O/347c261ec4135a5723bef5c751f5078f_138527.utf8, line 118, warning: 6 characters of junk seen at toplevel -[313] Biber.pm:131> WARN - BibTeX subsystem: /tmp/biber_tmp_y05O/347c261ec4135a5723bef5c751f5078f_138527.utf8, line 127, warning: 6 characters of junk seen at toplevel -[313] Biber.pm:131> WARN - BibTeX subsystem: /tmp/biber_tmp_y05O/347c261ec4135a5723bef5c751f5078f_138527.utf8, line 136, warning: 6 characters of junk seen at toplevel -[313] Biber.pm:131> WARN - BibTeX subsystem: /tmp/biber_tmp_y05O/347c261ec4135a5723bef5c751f5078f_138527.utf8, line 157, warning: 6 characters of junk seen at toplevel -[313] Biber.pm:131> WARN - BibTeX subsystem: /tmp/biber_tmp_y05O/347c261ec4135a5723bef5c751f5078f_138527.utf8, line 178, warning: 6 characters of junk seen at toplevel -[313] Biber.pm:131> WARN - BibTeX subsystem: /tmp/biber_tmp_y05O/347c261ec4135a5723bef5c751f5078f_138527.utf8, line 187, warning: 6 characters of junk seen at toplevel -[313] Biber.pm:131> WARN - BibTeX subsystem: /tmp/biber_tmp_y05O/347c261ec4135a5723bef5c751f5078f_138527.utf8, line 196, warning: 6 characters of junk seen at toplevel -[313] Biber.pm:131> WARN - BibTeX subsystem: /tmp/biber_tmp_y05O/347c261ec4135a5723bef5c751f5078f_138527.utf8, line 207, warning: 6 characters of junk seen at toplevel -[313] Biber.pm:131> WARN - BibTeX subsystem: /tmp/biber_tmp_y05O/347c261ec4135a5723bef5c751f5078f_138527.utf8, line 218, warning: 6 characters of junk seen at toplevel -[313] Biber.pm:131> WARN - BibTeX subsystem: /tmp/biber_tmp_y05O/347c261ec4135a5723bef5c751f5078f_138527.utf8, line 229, warning: 6 characters of junk seen at toplevel -[314] Biber.pm:131> WARN - BibTeX subsystem: /tmp/biber_tmp_y05O/347c261ec4135a5723bef5c751f5078f_138527.utf8, line 240, warning: 6 characters of junk seen at toplevel -[314] Biber.pm:131> WARN - BibTeX subsystem: /tmp/biber_tmp_y05O/347c261ec4135a5723bef5c751f5078f_138527.utf8, line 249, warning: 6 characters of junk seen at toplevel -[314] Biber.pm:131> WARN - BibTeX subsystem: /tmp/biber_tmp_y05O/347c261ec4135a5723bef5c751f5078f_138527.utf8, line 258, warning: 6 characters of junk seen at toplevel -[314] Biber.pm:131> WARN - BibTeX subsystem: /tmp/biber_tmp_y05O/347c261ec4135a5723bef5c751f5078f_138527.utf8, line 269, warning: 6 characters of junk seen at toplevel -[314] Biber.pm:131> WARN - BibTeX subsystem: /tmp/biber_tmp_y05O/347c261ec4135a5723bef5c751f5078f_138527.utf8, line 278, warning: 6 characters of junk seen at toplevel -[314] Biber.pm:131> WARN - BibTeX subsystem: /tmp/biber_tmp_y05O/347c261ec4135a5723bef5c751f5078f_138527.utf8, line 289, warning: 6 characters of junk seen at toplevel -[314] Biber.pm:131> WARN - BibTeX subsystem: /tmp/biber_tmp_y05O/347c261ec4135a5723bef5c751f5078f_138527.utf8, line 300, warning: 6 characters of junk seen at toplevel -[314] Biber.pm:131> WARN - BibTeX subsystem: /tmp/biber_tmp_y05O/347c261ec4135a5723bef5c751f5078f_138527.utf8, line 309, warning: 6 characters of junk seen at toplevel -[314] Biber.pm:131> WARN - BibTeX subsystem: /tmp/biber_tmp_y05O/347c261ec4135a5723bef5c751f5078f_138527.utf8, line 328, warning: 6 characters of junk seen at toplevel -[314] Biber.pm:131> WARN - BibTeX subsystem: /tmp/biber_tmp_y05O/347c261ec4135a5723bef5c751f5078f_138527.utf8, line 337, warning: 6 characters of junk seen at toplevel -[314] Biber.pm:131> WARN - BibTeX subsystem: /tmp/biber_tmp_y05O/347c261ec4135a5723bef5c751f5078f_138527.utf8, line 400, warning: 6 characters of junk seen at toplevel -[314] Biber.pm:131> WARN - BibTeX subsystem: /tmp/biber_tmp_y05O/347c261ec4135a5723bef5c751f5078f_138527.utf8, line 419, warning: 6 characters of junk seen at toplevel -[314] Biber.pm:131> WARN - BibTeX subsystem: /tmp/biber_tmp_y05O/347c261ec4135a5723bef5c751f5078f_138527.utf8, line 428, warning: 6 characters of junk seen at toplevel -[314] Biber.pm:131> WARN - BibTeX subsystem: /tmp/biber_tmp_y05O/347c261ec4135a5723bef5c751f5078f_138527.utf8, line 437, warning: 6 characters of junk seen at toplevel -[314] Biber.pm:131> WARN - BibTeX subsystem: /tmp/biber_tmp_y05O/347c261ec4135a5723bef5c751f5078f_138527.utf8, line 456, warning: 6 characters of junk seen at toplevel -[314] Biber.pm:131> WARN - BibTeX subsystem: /tmp/biber_tmp_y05O/347c261ec4135a5723bef5c751f5078f_138527.utf8, line 491, warning: 6 characters of junk seen at toplevel -[314] Biber.pm:131> WARN - BibTeX subsystem: /tmp/biber_tmp_y05O/347c261ec4135a5723bef5c751f5078f_138527.utf8, line 526, warning: 6 characters of junk seen at toplevel -[314] Biber.pm:131> WARN - BibTeX subsystem: /tmp/biber_tmp_y05O/347c261ec4135a5723bef5c751f5078f_138527.utf8, line 535, warning: 6 characters of junk seen at toplevel -[314] Biber.pm:131> WARN - BibTeX subsystem: /tmp/biber_tmp_y05O/347c261ec4135a5723bef5c751f5078f_138527.utf8, line 556, warning: 6 characters of junk seen at toplevel -[314] Biber.pm:131> WARN - BibTeX subsystem: /tmp/biber_tmp_y05O/347c261ec4135a5723bef5c751f5078f_138527.utf8, line 565, warning: 6 characters of junk seen at toplevel -[314] Biber.pm:131> WARN - BibTeX subsystem: /tmp/biber_tmp_y05O/347c261ec4135a5723bef5c751f5078f_138527.utf8, line 576, warning: 6 characters of junk seen at toplevel -[314] Biber.pm:131> WARN - BibTeX subsystem: /tmp/biber_tmp_y05O/347c261ec4135a5723bef5c751f5078f_138527.utf8, line 587, warning: 6 characters of junk seen at toplevel -[314] Biber.pm:131> WARN - BibTeX subsystem: /tmp/biber_tmp_y05O/347c261ec4135a5723bef5c751f5078f_138527.utf8, line 619, warning: 6 characters of junk seen at toplevel -[314] Biber.pm:131> WARN - BibTeX subsystem: /tmp/biber_tmp_y05O/347c261ec4135a5723bef5c751f5078f_138527.utf8, line 648, warning: 6 characters of junk seen at toplevel -[314] Biber.pm:131> WARN - BibTeX subsystem: /tmp/biber_tmp_y05O/347c261ec4135a5723bef5c751f5078f_138527.utf8, line 658, warning: 6 characters of junk seen at toplevel -[314] Biber.pm:131> WARN - BibTeX subsystem: /tmp/biber_tmp_y05O/347c261ec4135a5723bef5c751f5078f_138527.utf8, line 667, warning: 6 characters of junk seen at toplevel -[314] Biber.pm:131> WARN - BibTeX subsystem: /tmp/biber_tmp_y05O/347c261ec4135a5723bef5c751f5078f_138527.utf8, line 688, warning: 6 characters of junk seen at toplevel -[314] Biber.pm:131> WARN - BibTeX subsystem: /tmp/biber_tmp_y05O/347c261ec4135a5723bef5c751f5078f_138527.utf8, line 709, warning: 6 characters of junk seen at toplevel -[314] Biber.pm:131> WARN - BibTeX subsystem: /tmp/biber_tmp_y05O/347c261ec4135a5723bef5c751f5078f_138527.utf8, line 718, warning: 6 characters of junk seen at toplevel -[314] Biber.pm:131> WARN - BibTeX subsystem: /tmp/biber_tmp_y05O/347c261ec4135a5723bef5c751f5078f_138527.utf8, line 727, warning: 6 characters of junk seen at toplevel -[314] Biber.pm:131> WARN - BibTeX subsystem: /tmp/biber_tmp_y05O/347c261ec4135a5723bef5c751f5078f_138527.utf8, line 744, warning: 6 characters of junk seen at toplevel -[314] Biber.pm:131> WARN - BibTeX subsystem: /tmp/biber_tmp_y05O/347c261ec4135a5723bef5c751f5078f_138527.utf8, line 753, warning: 6 characters of junk seen at toplevel -[314] Biber.pm:131> WARN - BibTeX subsystem: /tmp/biber_tmp_y05O/347c261ec4135a5723bef5c751f5078f_138527.utf8, line 778, warning: 6 characters of junk seen at toplevel -[314] Biber.pm:131> WARN - BibTeX subsystem: /tmp/biber_tmp_y05O/347c261ec4135a5723bef5c751f5078f_138527.utf8, line 795, warning: 6 characters of junk seen at toplevel -[314] Biber.pm:133> INFO - WARNINGS: 54 +[110] bibtex.pm:1519> INFO - Found BibTeX data source 'cite.bib' +[282] UCollate.pm:68> INFO - Overriding locale 'en-US' defaults 'variable = shifted' with 'variable = non-ignorable' +[282] UCollate.pm:68> INFO - Overriding locale 'en-US' defaults 'normalization = NFD' with 'normalization = prenormalized' +[282] Biber.pm:4239> INFO - Sorting list 'nyt/global//global/global' of type 'entry' with template 'nyt' and locale 'en-US' +[282] Biber.pm:4245> INFO - No sort tailoring available for locale 'en-US' +[304] bbl.pm:660> INFO - Writing 'main.bbl' with encoding 'UTF-8' +[314] bbl.pm:763> INFO - Output to main.bbl +[314] Biber.pm:131> WARN - BibTeX subsystem: /tmp/biber_tmp_kvhD/347c261ec4135a5723bef5c751f5078f_27267.utf8, line 10, warning: 6 characters of junk seen at toplevel +[314] Biber.pm:131> WARN - BibTeX subsystem: /tmp/biber_tmp_kvhD/347c261ec4135a5723bef5c751f5078f_27267.utf8, line 21, warning: 6 characters of junk seen at toplevel +[314] Biber.pm:131> WARN - BibTeX subsystem: /tmp/biber_tmp_kvhD/347c261ec4135a5723bef5c751f5078f_27267.utf8, line 38, warning: 6 characters of junk seen at toplevel +[314] Biber.pm:131> WARN - BibTeX subsystem: /tmp/biber_tmp_kvhD/347c261ec4135a5723bef5c751f5078f_27267.utf8, line 49, warning: 6 characters of junk seen at toplevel +[314] Biber.pm:131> WARN - BibTeX subsystem: /tmp/biber_tmp_kvhD/347c261ec4135a5723bef5c751f5078f_27267.utf8, line 58, warning: 6 characters of junk seen at toplevel +[314] Biber.pm:131> WARN - BibTeX subsystem: /tmp/biber_tmp_kvhD/347c261ec4135a5723bef5c751f5078f_27267.utf8, line 73, warning: 6 characters of junk seen at toplevel +[314] Biber.pm:131> WARN - BibTeX subsystem: /tmp/biber_tmp_kvhD/347c261ec4135a5723bef5c751f5078f_27267.utf8, line 82, warning: 6 characters of junk seen at toplevel +[314] Biber.pm:131> WARN - BibTeX subsystem: /tmp/biber_tmp_kvhD/347c261ec4135a5723bef5c751f5078f_27267.utf8, line 91, warning: 6 characters of junk seen at toplevel +[314] Biber.pm:131> WARN - BibTeX subsystem: /tmp/biber_tmp_kvhD/347c261ec4135a5723bef5c751f5078f_27267.utf8, line 100, warning: 6 characters of junk seen at toplevel +[314] Biber.pm:131> WARN - BibTeX subsystem: /tmp/biber_tmp_kvhD/347c261ec4135a5723bef5c751f5078f_27267.utf8, line 109, warning: 6 characters of junk seen at toplevel +[314] Biber.pm:131> WARN - BibTeX subsystem: /tmp/biber_tmp_kvhD/347c261ec4135a5723bef5c751f5078f_27267.utf8, line 118, warning: 6 characters of junk seen at toplevel +[314] Biber.pm:131> WARN - BibTeX subsystem: /tmp/biber_tmp_kvhD/347c261ec4135a5723bef5c751f5078f_27267.utf8, line 127, warning: 6 characters of junk seen at toplevel +[314] Biber.pm:131> WARN - BibTeX subsystem: /tmp/biber_tmp_kvhD/347c261ec4135a5723bef5c751f5078f_27267.utf8, line 136, warning: 6 characters of junk seen at toplevel +[314] Biber.pm:131> WARN - BibTeX subsystem: /tmp/biber_tmp_kvhD/347c261ec4135a5723bef5c751f5078f_27267.utf8, line 157, warning: 6 characters of junk seen at toplevel +[314] Biber.pm:131> WARN - BibTeX subsystem: /tmp/biber_tmp_kvhD/347c261ec4135a5723bef5c751f5078f_27267.utf8, line 178, warning: 6 characters of junk seen at toplevel +[314] Biber.pm:131> WARN - BibTeX subsystem: /tmp/biber_tmp_kvhD/347c261ec4135a5723bef5c751f5078f_27267.utf8, line 187, warning: 6 characters of junk seen at toplevel +[314] Biber.pm:131> WARN - BibTeX subsystem: /tmp/biber_tmp_kvhD/347c261ec4135a5723bef5c751f5078f_27267.utf8, line 196, warning: 6 characters of junk seen at toplevel +[314] Biber.pm:131> WARN - BibTeX subsystem: /tmp/biber_tmp_kvhD/347c261ec4135a5723bef5c751f5078f_27267.utf8, line 207, warning: 6 characters of junk seen at toplevel +[314] Biber.pm:131> WARN - BibTeX subsystem: /tmp/biber_tmp_kvhD/347c261ec4135a5723bef5c751f5078f_27267.utf8, line 218, warning: 6 characters of junk seen at toplevel +[314] Biber.pm:131> WARN - BibTeX subsystem: /tmp/biber_tmp_kvhD/347c261ec4135a5723bef5c751f5078f_27267.utf8, line 229, warning: 6 characters of junk seen at toplevel +[314] Biber.pm:131> WARN - BibTeX subsystem: /tmp/biber_tmp_kvhD/347c261ec4135a5723bef5c751f5078f_27267.utf8, line 240, warning: 6 characters of junk seen at toplevel +[314] Biber.pm:131> WARN - BibTeX subsystem: /tmp/biber_tmp_kvhD/347c261ec4135a5723bef5c751f5078f_27267.utf8, line 249, warning: 6 characters of junk seen at toplevel +[314] Biber.pm:131> WARN - BibTeX subsystem: /tmp/biber_tmp_kvhD/347c261ec4135a5723bef5c751f5078f_27267.utf8, line 258, warning: 6 characters of junk seen at toplevel +[314] Biber.pm:131> WARN - BibTeX subsystem: /tmp/biber_tmp_kvhD/347c261ec4135a5723bef5c751f5078f_27267.utf8, line 269, warning: 6 characters of junk seen at toplevel +[314] Biber.pm:131> WARN - BibTeX subsystem: /tmp/biber_tmp_kvhD/347c261ec4135a5723bef5c751f5078f_27267.utf8, line 278, warning: 6 characters of junk seen at toplevel +[314] Biber.pm:131> WARN - BibTeX subsystem: /tmp/biber_tmp_kvhD/347c261ec4135a5723bef5c751f5078f_27267.utf8, line 289, warning: 6 characters of junk seen at toplevel +[314] Biber.pm:131> WARN - BibTeX subsystem: /tmp/biber_tmp_kvhD/347c261ec4135a5723bef5c751f5078f_27267.utf8, line 300, warning: 6 characters of junk seen at toplevel +[314] Biber.pm:131> WARN - BibTeX subsystem: /tmp/biber_tmp_kvhD/347c261ec4135a5723bef5c751f5078f_27267.utf8, line 309, warning: 6 characters of junk seen at toplevel +[314] Biber.pm:131> WARN - BibTeX subsystem: /tmp/biber_tmp_kvhD/347c261ec4135a5723bef5c751f5078f_27267.utf8, line 328, warning: 6 characters of junk seen at toplevel +[314] Biber.pm:131> WARN - BibTeX subsystem: /tmp/biber_tmp_kvhD/347c261ec4135a5723bef5c751f5078f_27267.utf8, line 337, warning: 6 characters of junk seen at toplevel +[314] Biber.pm:131> WARN - BibTeX subsystem: /tmp/biber_tmp_kvhD/347c261ec4135a5723bef5c751f5078f_27267.utf8, line 400, warning: 6 characters of junk seen at toplevel +[314] Biber.pm:131> WARN - BibTeX subsystem: /tmp/biber_tmp_kvhD/347c261ec4135a5723bef5c751f5078f_27267.utf8, line 419, warning: 6 characters of junk seen at toplevel +[314] Biber.pm:131> WARN - BibTeX subsystem: /tmp/biber_tmp_kvhD/347c261ec4135a5723bef5c751f5078f_27267.utf8, line 428, warning: 6 characters of junk seen at toplevel +[315] Biber.pm:131> WARN - BibTeX subsystem: /tmp/biber_tmp_kvhD/347c261ec4135a5723bef5c751f5078f_27267.utf8, line 437, warning: 6 characters of junk seen at toplevel +[315] Biber.pm:131> WARN - BibTeX subsystem: /tmp/biber_tmp_kvhD/347c261ec4135a5723bef5c751f5078f_27267.utf8, line 456, warning: 6 characters of junk seen at toplevel +[315] Biber.pm:131> WARN - BibTeX subsystem: /tmp/biber_tmp_kvhD/347c261ec4135a5723bef5c751f5078f_27267.utf8, line 491, warning: 6 characters of junk seen at toplevel +[315] Biber.pm:131> WARN - BibTeX subsystem: /tmp/biber_tmp_kvhD/347c261ec4135a5723bef5c751f5078f_27267.utf8, line 526, warning: 6 characters of junk seen at toplevel +[315] Biber.pm:131> WARN - BibTeX subsystem: /tmp/biber_tmp_kvhD/347c261ec4135a5723bef5c751f5078f_27267.utf8, line 535, warning: 6 characters of junk seen at toplevel +[315] Biber.pm:131> WARN - BibTeX subsystem: /tmp/biber_tmp_kvhD/347c261ec4135a5723bef5c751f5078f_27267.utf8, line 556, warning: 6 characters of junk seen at toplevel +[315] Biber.pm:131> WARN - BibTeX subsystem: /tmp/biber_tmp_kvhD/347c261ec4135a5723bef5c751f5078f_27267.utf8, line 565, warning: 6 characters of junk seen at toplevel +[315] Biber.pm:131> WARN - BibTeX subsystem: /tmp/biber_tmp_kvhD/347c261ec4135a5723bef5c751f5078f_27267.utf8, line 576, warning: 6 characters of junk seen at toplevel +[315] Biber.pm:131> WARN - BibTeX subsystem: /tmp/biber_tmp_kvhD/347c261ec4135a5723bef5c751f5078f_27267.utf8, line 587, warning: 6 characters of junk seen at toplevel +[315] Biber.pm:131> WARN - BibTeX subsystem: /tmp/biber_tmp_kvhD/347c261ec4135a5723bef5c751f5078f_27267.utf8, line 619, warning: 6 characters of junk seen at toplevel +[315] Biber.pm:131> WARN - BibTeX subsystem: /tmp/biber_tmp_kvhD/347c261ec4135a5723bef5c751f5078f_27267.utf8, line 648, warning: 6 characters of junk seen at toplevel +[315] Biber.pm:131> WARN - BibTeX subsystem: /tmp/biber_tmp_kvhD/347c261ec4135a5723bef5c751f5078f_27267.utf8, line 658, warning: 6 characters of junk seen at toplevel +[315] Biber.pm:131> WARN - BibTeX subsystem: /tmp/biber_tmp_kvhD/347c261ec4135a5723bef5c751f5078f_27267.utf8, line 667, warning: 6 characters of junk seen at toplevel +[315] Biber.pm:131> WARN - BibTeX subsystem: /tmp/biber_tmp_kvhD/347c261ec4135a5723bef5c751f5078f_27267.utf8, line 688, warning: 6 characters of junk seen at toplevel +[315] Biber.pm:131> WARN - BibTeX subsystem: /tmp/biber_tmp_kvhD/347c261ec4135a5723bef5c751f5078f_27267.utf8, line 709, warning: 6 characters of junk seen at toplevel +[315] Biber.pm:131> WARN - BibTeX subsystem: /tmp/biber_tmp_kvhD/347c261ec4135a5723bef5c751f5078f_27267.utf8, line 720, warning: 6 characters of junk seen at toplevel +[315] Biber.pm:131> WARN - BibTeX subsystem: /tmp/biber_tmp_kvhD/347c261ec4135a5723bef5c751f5078f_27267.utf8, line 729, warning: 6 characters of junk seen at toplevel +[315] Biber.pm:131> WARN - BibTeX subsystem: /tmp/biber_tmp_kvhD/347c261ec4135a5723bef5c751f5078f_27267.utf8, line 749, warning: 6 characters of junk seen at toplevel +[315] Biber.pm:131> WARN - BibTeX subsystem: /tmp/biber_tmp_kvhD/347c261ec4135a5723bef5c751f5078f_27267.utf8, line 766, warning: 6 characters of junk seen at toplevel +[315] Biber.pm:131> WARN - BibTeX subsystem: /tmp/biber_tmp_kvhD/347c261ec4135a5723bef5c751f5078f_27267.utf8, line 775, warning: 6 characters of junk seen at toplevel +[315] Biber.pm:131> WARN - BibTeX subsystem: /tmp/biber_tmp_kvhD/347c261ec4135a5723bef5c751f5078f_27267.utf8, line 800, warning: 6 characters of junk seen at toplevel +[315] Biber.pm:131> WARN - BibTeX subsystem: /tmp/biber_tmp_kvhD/347c261ec4135a5723bef5c751f5078f_27267.utf8, line 817, warning: 6 characters of junk seen at toplevel +[315] Biber.pm:133> INFO - WARNINGS: 55 diff --git a/main.fdb_latexmk b/main.fdb_latexmk index 14b2445..2408b6f 100644 --- a/main.fdb_latexmk +++ b/main.fdb_latexmk @@ -1,14 +1,14 @@ # Fdb version 4 -["biber main"] 1770822298.23951 "main.bcf" "main.bbl" "main" 1770822377.68945 0 - "cite.bib" 1770643506.04124 26738 a3ecf998ef3fd04ce34f87829707ecb5 "" - "main.bcf" 1770822377.6415 112636 ed1c2081e91b30dff1dc7040d84b8374 "pdflatex" +["biber main"] 1770908135.92672 "main.bcf" "main.bbl" "main" 1770909740.85496 0 + "cite.bib" 1770904753.08918 27483 4290db0c91f7b5055e25472ef913f6b4 "" + "main.bcf" 1770909740.80982 112931 2a478116d80ebb1ada7083a24facd6e3 "pdflatex" (generated) "main.bbl" "main.blg" (rewritten before read) -["pdflatex"] 1770822376.87226 "/home/hartling/phd/paper/paper_2025/main.tex" "main.pdf" "main" 1770822377.68966 0 +["pdflatex"] 1770909740.04415 "/home/hartling/phd/paper/paper_2025/main.tex" "main.pdf" "main" 1770909740.85516 0 "/etc/texmf/web2c/texmf.cnf" 1761560044.43676 475 c0e671620eb5563b2130f56340a5fde8 "" - "/home/hartling/phd/paper/paper_2025/main.tex" 1770822376.79351 37182 825845e9a021bafdd9886a5b499d79fd "" + "/home/hartling/phd/paper/paper_2025/main.tex" 1770909739.95483 39127 a7cd2ca5121e6f89fb995bfcbb00bb76 "" "/usr/share/texlive/texmf-dist/fonts/map/fontname/texfonts.map" 1577235249 3524 cb3e574dea2d1052e39280babc910dc8 "" "/usr/share/texlive/texmf-dist/fonts/tfm/public/amsfonts/cmextra/cmex7.tfm" 1246382020 1004 54797486969f23fa377b128694d548df "" "/usr/share/texlive/texmf-dist/fonts/tfm/public/amsfonts/cmextra/cmex8.tfm" 1246382020 988 bdf658c3bfc2d96d3c8b02cfc1c94c20 "" @@ -19,6 +19,7 @@ "/usr/share/texlive/texmf-dist/fonts/tfm/public/cm/cmbx10.tfm" 1136768653 1328 c834bbb027764024c09d3d2bf908b5f0 "" "/usr/share/texlive/texmf-dist/fonts/tfm/public/cm/cmbx12.tfm" 1136768653 1324 c910af8c371558dc20f2d7822f66fe64 "" "/usr/share/texlive/texmf-dist/fonts/tfm/public/cm/cmex10.tfm" 1136768653 992 662f679a0b3d2d53c1b94050fdaa3f50 "" + "/usr/share/texlive/texmf-dist/fonts/tfm/public/cm/cmmi10.tfm" 1136768653 1528 abec98dbc43e172678c11b3b9031252a "" "/usr/share/texlive/texmf-dist/fonts/tfm/public/cm/cmmi12.tfm" 1136768653 1524 4414a8315f39513458b80dfc63bff03a "" "/usr/share/texlive/texmf-dist/fonts/tfm/public/cm/cmmi6.tfm" 1136768653 1512 f21f83efb36853c0b70002322c1ab3ad "" "/usr/share/texlive/texmf-dist/fonts/tfm/public/cm/cmmi8.tfm" 1136768653 1520 eccf95517727cb11801f4f1aee3a21b4 "" @@ -34,6 +35,7 @@ "/usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmbx10.pfb" 1248133631 34811 78b52f49e893bcba91bd7581cdc144c0 "" "/usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmbx12.pfb" 1248133631 32080 340ef9bf63678554ee606688e7b5339d "" "/usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmex10.pfb" 1248133631 30251 6afa5cb1d0204815a708a080681d4674 "" + "/usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmmi10.pfb" 1248133631 36299 5f9df58c2139e7edcf37c8fca4bd384d "" "/usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmmi12.pfb" 1248133631 36741 fa121aac0049305630cf160b86157ee4 "" "/usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmmi6.pfb" 1248133631 37166 8ab3487cbe3ab49ebce74c29ea2418db "" "/usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmmi8.pfb" 1248133631 35469 70d41d2b9ea31d5d813066df7c99281c "" @@ -47,6 +49,15 @@ "/usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/cm/cmti12.pfb" 1248133631 36118 fad905eba93cff5bce1e185fe980a177 "" "/usr/share/texlive/texmf-dist/fonts/type1/public/amsfonts/symbols/msbm10.pfb" 1248133631 34694 ad62b13721ee8eda1dcc8993c8bd7041 "" "/usr/share/texlive/texmf-dist/tex/context/base/mkii/supp-pdf.mkii" 1461363279 71627 94eb9990bed73c364d7f53f960cc8c5b "" + "/usr/share/texlive/texmf-dist/tex/generic/babel-english/english.ldf" 1496785618 7008 9ff5fdcc865b01beca2b0fe4a46231d4 "" + "/usr/share/texlive/texmf-dist/tex/generic/babel-german/german.ldf" 1705784828 2317 770765b11eb80315440660ff5398cbfc "" + "/usr/share/texlive/texmf-dist/tex/generic/babel-german/germanb.ldf" 1705784828 9838 b9de1c6e35ce08917e2d0fbc14c06d99 "" + "/usr/share/texlive/texmf-dist/tex/generic/babel/babel.sty" 1704662920 150008 7a05b0fdc0167c04e192003e780ab195 "" + "/usr/share/texlive/texmf-dist/tex/generic/babel/locale/de/babel-de.ini" 1661803479 4096 fa1802f91144b2c083d61dddf097a6d2 "" + "/usr/share/texlive/texmf-dist/tex/generic/babel/locale/de/babel-german.tex" 1681846791 699 565e921a0b7b8366adf163b0ecc00e44 "" + "/usr/share/texlive/texmf-dist/tex/generic/babel/locale/en/babel-en.ini" 1661803479 3966 caeee5a9e5771d4446aa1ca9015ba1b2 "" + "/usr/share/texlive/texmf-dist/tex/generic/babel/locale/en/babel-english.tex" 1498512262 336 ed676b5e7dfd862bc78d634f6a973f37 "" + "/usr/share/texlive/texmf-dist/tex/generic/babel/txtbabel.def" 1704662920 6948 df63e25be1d2bc35bbad5a0141f41348 "" "/usr/share/texlive/texmf-dist/tex/generic/iftex/iftex.sty" 1644112042 7237 bdd120a32c8fdb4b433cf9ca2e7cd98a "" "/usr/share/texlive/texmf-dist/tex/generic/iftex/ifvtex.sty" 1572645307 1057 525c2192b5febbd8c1f662c9468335bb "" "/usr/share/texlive/texmf-dist/tex/generic/infwarerr/infwarerr.sty" 1575499628 8356 7bbb2c2373aa810be568c29e333da8ed "" @@ -87,6 +98,7 @@ "/usr/share/texlive/texmf-dist/tex/latex/biblatex/blx-dm.def" 1643926307 32455 8d3e554836db11aab80a8e11be62e1b1 "" "/usr/share/texlive/texmf-dist/tex/latex/biblatex/cbx/authoryear.cbx" 1566680006 3976 2d46354b304f9bc8fda915fe9215de04 "" "/usr/share/texlive/texmf-dist/tex/latex/biblatex/lbx/english.lbx" 1643926307 39965 48ce9ce3350aba9457f1020b1deba5cf "" + "/usr/share/texlive/texmf-dist/tex/latex/biblatex/lbx/german.lbx" 1643926307 33908 9178e63849ed8d931ae427546930e76a "" "/usr/share/texlive/texmf-dist/tex/latex/caption/caption.sty" 1696191071 56128 c2ccf1a29d78c33bc553880402e4fb9a "" "/usr/share/texlive/texmf-dist/tex/latex/caption/caption3.sty" 1696191071 72619 ee90b6612147680fd73c3b1406a74245 "" "/usr/share/texlive/texmf-dist/tex/latex/caption/subcaption.sty" 1690576852 12494 0c0cdb824278a4d51cefeb2e79901315 "" @@ -126,6 +138,7 @@ "/usr/share/texlive/texmf-dist/tex/latex/tools/array.sty" 1698869629 12667 e4b5eb11e4b7239e6c8a52bbe074a6c6 "" "/usr/share/texlive/texmf-dist/tex/latex/tools/shellesc.sty" 1698869629 4121 f96144e646260251ded7f19bcb6f4e71 "" "/usr/share/texlive/texmf-dist/tex/latex/translations/translations-basic-dictionary-english.trsl" 1644096163 5588 0c1628daf15f4411ff1f463114c634a3 "" + "/usr/share/texlive/texmf-dist/tex/latex/translations/translations-basic-dictionary-german.trsl" 1644096163 5724 19fd98571803494f625d81b5ad0a0589 "" "/usr/share/texlive/texmf-dist/tex/latex/translations/translations.sty" 1644096163 44247 2188b95d0ee74e31eca4d316263c58a7 "" "/usr/share/texlive/texmf-dist/tex/latex/transparent/transparent-nometadata.sty" 1667073146 4212 8da4873548cbd3f1cdb053c708e8aa7e "" "/usr/share/texlive/texmf-dist/tex/latex/transparent/transparent.sty" 1667073146 1918 c8d1ecb3722721d6f624992cbc042b70 "" @@ -138,10 +151,10 @@ "/var/lib/texmf/web2c/pdftex/pdflatex.fmt" 1761648508 8213325 7fd20752ab46ff9aa583e4973d7433df "" "figures/fig_auditory_pathway.pdf" 1769682029.31297 1284536 cd071429286586e390a99d74f742d2d5 "" "figures/fig_auditory_pathway.pdf_tex" 1769682029.31397 2624 f8d79af301f26c4639670ba4283887a2 "" - "main.aux" 1770822377.6365 10298 322a9b82d6d59a31cdc14eb625fa5e53 "pdflatex" - "main.bbl" 1770822298.8335 89431 57af6218181e1f5d094bd77e848a7130 "biber main" - "main.run.xml" 1770822377.6415 2305 d0067550f22ade5b49f22d40cea22838 "pdflatex" - "main.tex" 1770822376.79351 37182 825845e9a021bafdd9886a5b499d79fd "" + "main.aux" 1770909740.80382 10828 27979d381c53a50541bc62175148bf97 "pdflatex" + "main.bbl" 1770908136.51937 91039 1380dc8c93d2855fdb132cc5a40ad52f "biber main" + "main.run.xml" 1770909740.80982 2335 a049bc26a7f032e842ce55de5bc38328 "pdflatex" + "main.tex" 1770909739.95483 39127 a7cd2ca5121e6f89fb995bfcbb00bb76 "" (generated) "main.aux" "main.bcf" diff --git a/main.fls b/main.fls index fba563b..25086bb 100644 --- a/main.fls +++ b/main.fls @@ -128,6 +128,24 @@ INPUT /usr/share/texlive/texmf-dist/tex/latex/caption/caption.sty INPUT /usr/share/texlive/texmf-dist/tex/latex/caption/caption.sty INPUT /usr/share/texlive/texmf-dist/tex/latex/caption/caption3.sty INPUT /usr/share/texlive/texmf-dist/tex/latex/caption/caption3.sty +INPUT /usr/share/texlive/texmf-dist/tex/generic/babel/babel.sty +INPUT /usr/share/texlive/texmf-dist/tex/generic/babel/babel.sty +INPUT /usr/share/texlive/texmf-dist/tex/generic/babel/txtbabel.def +INPUT /usr/share/texlive/texmf-dist/tex/generic/babel-german/german.ldf +INPUT /usr/share/texlive/texmf-dist/tex/generic/babel-german/german.ldf +INPUT /usr/share/texlive/texmf-dist/tex/generic/babel-german/german.ldf +INPUT /usr/share/texlive/texmf-dist/tex/generic/babel-german/germanb.ldf +INPUT /usr/share/texlive/texmf-dist/tex/generic/babel-english/english.ldf +INPUT /usr/share/texlive/texmf-dist/tex/generic/babel-english/english.ldf +INPUT /usr/share/texlive/texmf-dist/tex/generic/babel-english/english.ldf +INPUT /usr/share/texlive/texmf-dist/tex/generic/babel/locale/en/babel-english.tex +INPUT /usr/share/texlive/texmf-dist/tex/generic/babel/locale/en/babel-english.tex +INPUT /usr/share/texlive/texmf-dist/tex/generic/babel/locale/en/babel-english.tex +INPUT /usr/share/texlive/texmf-dist/tex/generic/babel/locale/en/babel-en.ini +INPUT /usr/share/texlive/texmf-dist/tex/generic/babel/locale/de/babel-german.tex +INPUT /usr/share/texlive/texmf-dist/tex/generic/babel/locale/de/babel-german.tex +INPUT /usr/share/texlive/texmf-dist/tex/generic/babel/locale/de/babel-german.tex +INPUT /usr/share/texlive/texmf-dist/tex/generic/babel/locale/de/babel-de.ini INPUT /usr/share/texlive/texmf-dist/tex/latex/siunitx/siunitx.sty INPUT /usr/share/texlive/texmf-dist/tex/latex/siunitx/siunitx.sty INPUT /usr/share/texlive/texmf-dist/tex/latex/translations/translations.sty @@ -190,9 +208,15 @@ INPUT /usr/share/texlive/texmf-dist/tex/latex/latexconfig/epstopdf-sys.cfg INPUT /usr/share/texlive/texmf-dist/tex/latex/translations/translations-basic-dictionary-english.trsl INPUT /usr/share/texlive/texmf-dist/tex/latex/translations/translations-basic-dictionary-english.trsl INPUT /usr/share/texlive/texmf-dist/tex/latex/translations/translations-basic-dictionary-english.trsl +INPUT /usr/share/texlive/texmf-dist/tex/latex/translations/translations-basic-dictionary-german.trsl +INPUT /usr/share/texlive/texmf-dist/tex/latex/translations/translations-basic-dictionary-german.trsl +INPUT /usr/share/texlive/texmf-dist/tex/latex/translations/translations-basic-dictionary-german.trsl INPUT /usr/share/texlive/texmf-dist/tex/latex/biblatex/lbx/english.lbx INPUT /usr/share/texlive/texmf-dist/tex/latex/biblatex/lbx/english.lbx INPUT /usr/share/texlive/texmf-dist/tex/latex/biblatex/lbx/english.lbx +INPUT /usr/share/texlive/texmf-dist/tex/latex/biblatex/lbx/german.lbx +INPUT /usr/share/texlive/texmf-dist/tex/latex/biblatex/lbx/german.lbx +INPUT /usr/share/texlive/texmf-dist/tex/latex/biblatex/lbx/german.lbx OUTPUT main.bcf INPUT main.bbl INPUT ./main.bbl @@ -251,12 +275,18 @@ INPUT /usr/share/texlive/texmf-dist/fonts/tfm/public/cm/cmbx12.tfm INPUT /usr/share/texlive/texmf-dist/fonts/tfm/public/cm/cmr10.tfm INPUT /usr/share/texlive/texmf-dist/fonts/tfm/public/cm/cmbx10.tfm INPUT /usr/share/texlive/texmf-dist/fonts/tfm/public/cm/cmbx12.tfm +INPUT /usr/share/texlive/texmf-dist/fonts/tfm/public/cm/cmmi10.tfm +INPUT /usr/share/texlive/texmf-dist/fonts/tfm/public/cm/cmsy10.tfm +INPUT /usr/share/texlive/texmf-dist/fonts/tfm/public/cm/cmex10.tfm +INPUT /usr/share/texlive/texmf-dist/fonts/tfm/public/amsfonts/symbols/msam10.tfm +INPUT /usr/share/texlive/texmf-dist/fonts/tfm/public/amsfonts/symbols/msbm10.tfm INPUT main.aux INPUT main.run.xml OUTPUT main.run.xml INPUT 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babel system +Package babel Info: Hyphen rules for 'canadian' set to \l@english +(babel) (\language0). Reported on input line 102. +Package babel Info: Hyphen rules for 'australian' set to \l@ukenglish +(babel) (\language58). Reported on input line 105. +Package babel Info: Hyphen rules for 'newzealand' set to \l@ukenglish +(babel) (\language58). Reported on input line 108. +)) (/usr/share/texlive/texmf-dist/tex/generic/babel/locale/en/babel-english.tex +Package babel Info: Importing font and identification data for english +(babel) from babel-en.ini. Reported on input line 11. +) (/usr/share/texlive/texmf-dist/tex/generic/babel/locale/de/babel-german.tex +Package babel Info: Importing font and identification data for german +(babel) from babel-de.ini. 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(/usr/share/texlive/texmf-dist/tex/latex/logreq/logreq.sty Package: logreq 2010/08/04 v1.0 xml request logger -\lrq@indent=\count305 +\lrq@indent=\count307 (/usr/share/texlive/texmf-dist/tex/latex/logreq/logreq.def File: logreq.def 2010/08/04 v1.0 logreq spec v1.0 )) (/usr/share/texlive/texmf-dist/tex/latex/base/ifthen.sty @@ -343,49 +370,49 @@ Package: ifthen 2022/04/13 v1.1d Standard LaTeX ifthen package (DPC) \Urlmuskip=\muskip17 Package: url 2013/09/16 ver 3.4 Verb mode for urls, etc. ) -\c@tabx@nest=\count306 -\c@listtotal=\count307 -\c@listcount=\count308 -\c@liststart=\count309 -\c@liststop=\count310 -\c@citecount=\count311 -\c@citetotal=\count312 -\c@multicitecount=\count313 -\c@multicitetotal=\count314 -\c@instcount=\count315 -\c@maxnames=\count316 -\c@minnames=\count317 -\c@maxitems=\count318 -\c@minitems=\count319 -\c@citecounter=\count320 -\c@maxcitecounter=\count321 -\c@savedcitecounter=\count322 -\c@uniquelist=\count323 -\c@uniquename=\count324 -\c@refsection=\count325 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+\c@minitems=\count321 +\c@citecounter=\count322 +\c@maxcitecounter=\count323 +\c@savedcitecounter=\count324 +\c@uniquelist=\count325 +\c@uniquename=\count326 +\c@refsection=\count327 +\c@refsegment=\count328 +\c@maxextratitle=\count329 +\c@maxextratitleyear=\count330 +\c@maxextraname=\count331 +\c@maxextradate=\count332 +\c@maxextraalpha=\count333 +\c@abbrvpenalty=\count334 +\c@highnamepenalty=\count335 +\c@lownamepenalty=\count336 +\c@maxparens=\count337 +\c@parenlevel=\count338 +\blx@tempcnta=\count339 +\blx@tempcntb=\count340 +\blx@tempcntc=\count341 +\c@blx@maxsection=\count342 +\blx@maxsegment@0=\count343 +\blx@notetype=\count344 +\blx@parenlevel@text=\count345 +\blx@parenlevel@foot=\count346 +\blx@sectionciteorder@0=\count347 +\blx@sectionciteorderinternal@0=\count348 +\blx@entrysetcounter=\count349 +\blx@biblioinstance=\count350 \labelnumberwidth=\skip55 \labelalphawidth=\skip56 \biblabelsep=\skip57 @@ -394,12 +421,12 @@ Package: url 2013/09/16 ver 3.4 Verb mode for urls, etc. \bibinitsep=\skip60 \bibparsep=\skip61 \bibhang=\skip62 -\blx@bcfin=\read3 +\blx@bcfin=\read4 \blx@bcfout=\write4 -\blx@langwohyphens=\language89 -\c@mincomprange=\count349 -\c@maxcomprange=\count350 -\c@mincompwidth=\count351 +\blx@langwohyphens=\language90 +\c@mincomprange=\count351 +\c@maxcomprange=\count352 +\c@mincompwidth=\count353 Package biblatex Info: Trying to load biblatex default data model... Package biblatex Info: ... file 'blx-dm.def' found. (/usr/share/texlive/texmf-dist/tex/latex/biblatex/blx-dm.def @@ -409,74 +436,74 @@ Package biblatex Info: Trying to load biblatex style data model... Package biblatex Info: ... file 'authoryear.dbx' not found. Package biblatex Info: Trying to load biblatex custom data model... Package biblatex Info: ... file 'biblatex-dm.cfg' not found. -\c@afterword=\count352 -\c@savedafterword=\count353 -\c@annotator=\count354 -\c@savedannotator=\count355 -\c@author=\count356 -\c@savedauthor=\count357 -\c@bookauthor=\count358 -\c@savedbookauthor=\count359 -\c@commentator=\count360 -\c@savedcommentator=\count361 -\c@editor=\count362 -\c@savededitor=\count363 -\c@editora=\count364 -\c@savededitora=\count365 -\c@editorb=\count366 -\c@savededitorb=\count367 -\c@editorc=\count368 -\c@savededitorc=\count369 -\c@foreword=\count370 -\c@savedforeword=\count371 -\c@holder=\count372 -\c@savedholder=\count373 -\c@introduction=\count374 -\c@savedintroduction=\count375 -\c@namea=\count376 -\c@savednamea=\count377 -\c@nameb=\count378 -\c@savednameb=\count379 -\c@namec=\count380 -\c@savednamec=\count381 -\c@translator=\count382 -\c@savedtranslator=\count383 -\c@shortauthor=\count384 -\c@savedshortauthor=\count385 -\c@shorteditor=\count386 -\c@savedshorteditor=\count387 -\c@labelname=\count388 -\c@savedlabelname=\count389 -\c@institution=\count390 -\c@savedinstitution=\count391 -\c@lista=\count392 -\c@savedlista=\count393 -\c@listb=\count394 -\c@savedlistb=\count395 -\c@listc=\count396 -\c@savedlistc=\count397 -\c@listd=\count398 -\c@savedlistd=\count399 -\c@liste=\count400 -\c@savedliste=\count401 -\c@listf=\count402 -\c@savedlistf=\count403 -\c@location=\count404 -\c@savedlocation=\count405 -\c@organization=\count406 -\c@savedorganization=\count407 -\c@origlocation=\count408 -\c@savedoriglocation=\count409 -\c@origpublisher=\count410 -\c@savedorigpublisher=\count411 -\c@publisher=\count412 -\c@savedpublisher=\count413 -\c@language=\count414 -\c@savedlanguage=\count415 -\c@origlanguage=\count416 -\c@savedoriglanguage=\count417 -\c@pageref=\count418 -\c@savedpageref=\count419 +\c@afterword=\count354 +\c@savedafterword=\count355 +\c@annotator=\count356 +\c@savedannotator=\count357 +\c@author=\count358 +\c@savedauthor=\count359 +\c@bookauthor=\count360 +\c@savedbookauthor=\count361 +\c@commentator=\count362 +\c@savedcommentator=\count363 +\c@editor=\count364 +\c@savededitor=\count365 +\c@editora=\count366 +\c@savededitora=\count367 +\c@editorb=\count368 +\c@savededitorb=\count369 +\c@editorc=\count370 +\c@savededitorc=\count371 +\c@foreword=\count372 +\c@savedforeword=\count373 +\c@holder=\count374 +\c@savedholder=\count375 +\c@introduction=\count376 +\c@savedintroduction=\count377 +\c@namea=\count378 +\c@savednamea=\count379 +\c@nameb=\count380 +\c@savednameb=\count381 +\c@namec=\count382 +\c@savednamec=\count383 +\c@translator=\count384 +\c@savedtranslator=\count385 +\c@shortauthor=\count386 +\c@savedshortauthor=\count387 +\c@shorteditor=\count388 +\c@savedshorteditor=\count389 +\c@labelname=\count390 +\c@savedlabelname=\count391 +\c@institution=\count392 +\c@savedinstitution=\count393 +\c@lista=\count394 +\c@savedlista=\count395 +\c@listb=\count396 +\c@savedlistb=\count397 +\c@listc=\count398 +\c@savedlistc=\count399 +\c@listd=\count400 +\c@savedlistd=\count401 +\c@liste=\count402 +\c@savedliste=\count403 +\c@listf=\count404 +\c@savedlistf=\count405 +\c@location=\count406 +\c@savedlocation=\count407 +\c@organization=\count408 +\c@savedorganization=\count409 +\c@origlocation=\count410 +\c@savedoriglocation=\count411 +\c@origpublisher=\count412 +\c@savedorigpublisher=\count413 +\c@publisher=\count414 +\c@savedpublisher=\count415 +\c@language=\count416 +\c@savedlanguage=\count417 +\c@origlanguage=\count418 +\c@savedoriglanguage=\count419 +\c@pageref=\count420 +\c@savedpageref=\count421 \shorthandwidth=\skip63 \shortjournalwidth=\skip64 \shortserieswidth=\skip65 @@ -500,19 +527,19 @@ Package biblatex Info: Trying to load generic definitions... Package biblatex Info: ... file 'biblatex.def' found. (/usr/share/texlive/texmf-dist/tex/latex/biblatex/biblatex.def File: biblatex.def 2023/03/05 v3.19 biblatex compatibility (PK/MW) -\c@textcitecount=\count420 -\c@textcitetotal=\count421 -\c@textcitemaxnames=\count422 -\c@biburlbigbreakpenalty=\count423 -\c@biburlbreakpenalty=\count424 -\c@biburlnumpenalty=\count425 -\c@biburlucpenalty=\count426 -\c@biburllcpenalty=\count427 +\c@textcitecount=\count422 +\c@textcitetotal=\count423 +\c@textcitemaxnames=\count424 +\c@biburlbigbreakpenalty=\count425 +\c@biburlbreakpenalty=\count426 +\c@biburlnumpenalty=\count427 +\c@biburlucpenalty=\count428 +\c@biburllcpenalty=\count429 \biburlbigskip=\muskip18 \biburlnumskip=\muskip19 \biburlucskip=\muskip20 \biburllcskip=\muskip21 -\c@smartand=\count428 +\c@smartand=\count430 ) Package biblatex Info: Trying to load bibliography style 'authoryear'... Package biblatex Info: ... file 'authoryear.bbx' found. @@ -522,8 +549,8 @@ Package biblatex Info: Trying to load bibliography style 'standard'... Package biblatex Info: ... file 'standard.bbx' found. (/usr/share/texlive/texmf-dist/tex/latex/biblatex/bbx/standard.bbx File: standard.bbx 2023/03/05 v3.19 biblatex bibliography style (PK/MW) -\c@bbx:relatedcount=\count429 -\c@bbx:relatedtotal=\count430 +\c@bbx:relatedcount=\count431 +\c@bbx:relatedtotal=\count432 )) Package biblatex Info: Trying to load citation style 'authoryear'... Package biblatex Info: ... file 'authoryear.cbx' found. @@ -548,7 +575,7 @@ Package biblatex Info: Document encoding is UTF8 .... Package: expl3 2024-01-22 L3 programming layer (loader) (/usr/share/texlive/texmf-dist/tex/latex/l3backend/l3backend-pdftex.def File: l3backend-pdftex.def 2024-01-04 L3 backend support: PDF output (pdfTeX) -\l__color_backend_stack_int=\count431 +\l__color_backend_stack_int=\count433 \l__pdf_internal_box=\box67 )) Package biblatex Info: ... and expl3 @@ -560,26 +587,29 @@ Package: xparse 2023-10-10 L3 Experimental document command parser ) Package: blx-case-expl3 2023/03/05 v3.19 expl3 case changing code for biblatex )) -Package translations Info: No language package found. I am going to use `english' as default language. on input line 34. -\@quotelevel=\count432 -\@quotereset=\count433 - (./main.aux) + +Package biblatex Warning: 'babel/polyglossia' detected but 'csquotes' missing. +(biblatex) Loading 'csquotes' recommended. + +\@quotelevel=\count434 +\@quotereset=\count435 +(./main.aux) \openout1 = `main.aux'. -LaTeX Font Info: Checking defaults for OML/cmm/m/it on input line 34. -LaTeX Font Info: ... okay on input line 34. -LaTeX Font Info: Checking defaults for OMS/cmsy/m/n on input line 34. -LaTeX Font Info: ... okay on input line 34. -LaTeX Font Info: Checking defaults for OT1/cmr/m/n on input line 34. -LaTeX Font Info: ... okay on input line 34. -LaTeX Font Info: Checking defaults for T1/cmr/m/n on input line 34. -LaTeX Font Info: ... okay on input line 34. -LaTeX Font Info: Checking defaults for TS1/cmr/m/n on input line 34. -LaTeX Font Info: ... okay on input line 34. -LaTeX Font Info: Checking defaults for OMX/cmex/m/n on input line 34. -LaTeX Font Info: ... okay on input line 34. -LaTeX Font Info: Checking defaults for U/cmr/m/n on input line 34. -LaTeX Font Info: ... okay on input line 34. +LaTeX Font Info: Checking defaults for OML/cmm/m/it on input line 37. +LaTeX Font Info: ... okay on input line 37. +LaTeX Font Info: Checking defaults for OMS/cmsy/m/n on input line 37. +LaTeX Font Info: ... okay on input line 37. +LaTeX Font Info: Checking defaults for OT1/cmr/m/n on input line 37. +LaTeX Font Info: ... okay on input line 37. +LaTeX Font Info: Checking defaults for T1/cmr/m/n on input line 37. +LaTeX Font Info: ... okay on input line 37. +LaTeX Font Info: Checking defaults for TS1/cmr/m/n on input line 37. +LaTeX Font Info: ... okay on input line 37. +LaTeX Font Info: Checking defaults for OMX/cmex/m/n on input line 37. +LaTeX Font Info: ... okay on input line 37. +LaTeX Font Info: Checking defaults for U/cmr/m/n on input line 37. +LaTeX Font Info: ... okay on input line 37. *geometry* driver: auto-detecting *geometry* detected driver: pdftex @@ -617,16 +647,16 @@ LaTeX Font Info: ... okay on input line 34. (/usr/share/texlive/texmf-dist/tex/context/base/mkii/supp-pdf.mkii [Loading MPS to PDF converter (version 2006.09.02).] -\scratchcounter=\count434 -\scratchdimen=\dimen187 +\scratchcounter=\count436 +\scratchdimen=\dimen188 \scratchbox=\box68 -\nofMPsegments=\count435 -\nofMParguments=\count436 +\nofMPsegments=\count437 +\nofMParguments=\count438 \everyMPshowfont=\toks34 -\MPscratchCnt=\count437 -\MPscratchDim=\dimen188 -\MPnumerator=\count438 -\makeMPintoPDFobject=\count439 +\MPscratchCnt=\count439 +\MPscratchDim=\dimen189 +\MPnumerator=\count440 +\makeMPintoPDFobject=\count441 \everyMPtoPDFconversion=\toks35 ) (/usr/share/texlive/texmf-dist/tex/latex/epstopdf-pkg/epstopdf-base.sty Package: epstopdf-base 2020-01-24 v2.11 Base part for package epstopdf @@ -639,12 +669,21 @@ Package caption Info: End \AtBeginDocument code. (/usr/share/texlive/texmf-dist/tex/latex/translations/translations-basic-dictionary-english.trsl File: translations-basic-dictionary-english.trsl (english translation file `translations-basic-dictionary') ) -Package translations Info: loading dictionary `translations-basic-dictionary' for `english'. on input line 34. +Package translations Info: loading dictionary `translations-basic-dictionary' for `english'. on input line 37. + (/usr/share/texlive/texmf-dist/tex/latex/translations/translations-basic-dictionary-german.trsl +File: translations-basic-dictionary-german.trsl (german translation file `translations-basic-dictionary') +) +Package translations Info: loading dictionary `translations-basic-dictionary' for `german'. on input line 37. Package biblatex Info: Trying to load language 'english'... Package biblatex Info: ... file 'english.lbx' found. (/usr/share/texlive/texmf-dist/tex/latex/biblatex/lbx/english.lbx File: english.lbx 2023/03/05 v3.19 biblatex localization (PK/MW) ) +Package biblatex Info: Trying to load language 'german'... +Package biblatex Info: ... file 'german.lbx' found. + (/usr/share/texlive/texmf-dist/tex/latex/biblatex/lbx/german.lbx +File: german.lbx 2023/03/05 v3.19 biblatex localization (PK/MW) +) Package biblatex Info: Input encoding 'utf8' detected. Package biblatex Info: Automatic encoding selection. (biblatex) Assuming data encoding 'utf8'. @@ -653,64 +692,64 @@ Package biblatex Info: Automatic encoding selection. Package biblatex Info: Trying to load bibliographic data... Package biblatex Info: ... file 'main.bbl' found. (./main.bbl) -Package biblatex Info: Reference section=0 on input line 34. -Package biblatex Info: Reference segment=0 on input line 34. -LaTeX Font Info: Trying to load font information for U+msa on input line 35. +Package biblatex Info: Reference section=0 on input line 37. +Package biblatex Info: Reference segment=0 on input line 37. +LaTeX Font Info: Trying to load font information for U+msa on input line 38. (/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsa.fd File: umsa.fd 2013/01/14 v3.01 AMS symbols A ) -LaTeX Font Info: Trying to load font information for U+msb on input line 35. +LaTeX Font Info: Trying to load font information for U+msb on input line 38. (/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsb.fd File: umsb.fd 2013/01/14 v3.01 AMS symbols B ) -Overfull \hbox (50.94092pt too wide) in paragraph at lines 107--138 +Overfull \hbox (50.94092pt too wide) in paragraph at lines 114--145 \OT1/cmr/m/n/12 ing pri-mar-ily for in-traspe-cific com-mu-ni-ca-tion, which in-cludes mate at-trac-tion ([]) [] -Overfull \hbox (82.85727pt too wide) in paragraph at lines 107--138 +Overfull \hbox (82.85727pt too wide) in paragraph at lines 114--145 \OT1/cmr/m/n/12 and eval-u-a-tion ([]), sender lo-cal-iza-tion ([]), [] -Overfull \hbox (1.14978pt too wide) in paragraph at lines 107--138 +Overfull \hbox (1.14978pt too wide) in paragraph at lines 114--145 \OT1/cmr/m/n/12 courtship dis-play ([]), ri-val de-ter-rence ([]), and loss- [] -Overfull \hbox (18.33708pt too wide) in paragraph at lines 107--138 +Overfull \hbox (18.33708pt too wide) in paragraph at lines 114--145 \OT1/cmr/m/n/12 ally more char-ac-ter-is-tic of a species than mor-pho-log-i-cal traits ([]; [] -Overfull \hbox (19.06393pt too wide) in paragraph at lines 107--138 +Overfull \hbox (19.06393pt too wide) in paragraph at lines 114--145 []\OT1/cmr/m/n/12 ), which can vary greatly within species ([]; []). [] -Overfull \hbox (3.45023pt too wide) in paragraph at lines 107--138 +Overfull \hbox (3.45023pt too wide) in paragraph at lines 114--145 \OT1/cmr/m/n/12 di-rec-tional hear-ing ([]; []; [] [1 {/var/lib/texmf/fonts/map/pdftex/updmap/pdftex.map}] -Overfull \hbox (0.45996pt too wide) in paragraph at lines 142--199 +Overfull \hbox (0.45996pt too wide) in paragraph at lines 149--206 \OT1/cmr/m/n/12 ab-so-lute time in-ter-vals ([]; []), [] -Overfull \hbox (81.98225pt too wide) in paragraph at lines 142--199 +Overfull \hbox (81.98225pt too wide) in paragraph at lines 149--206 \OT1/cmr/m/n/12 cess, in which dif-fer-ent neu-ronal pop-u-la-tions con-tribute to vary-ing de-grees ([]) [] -Overfull \hbox (0.27292pt too wide) in paragraph at lines 142--199 +Overfull \hbox (0.27292pt too wide) in paragraph at lines 149--206 \OT1/cmr/m/n/12 and by dif-fer-ent mech-a-nisms ([]). Ap-prox-i-mat-ing this pro-cess within [] [2] -Overfull \hbox (50.3275pt too wide) in paragraph at lines 203--264 +Overfull \hbox (50.3275pt too wide) in paragraph at lines 210--271 \OT1/cmr/m/n/12 ets ([]; []) and grasshop-pers ([]; [] @@ -725,17 +764,17 @@ Package pdftex.def Info: figures/fig_auditory_pathway.pdf , page1 used on input LaTeX Warning: Text page 6 contains only floats. [6 <./figures/fig_auditory_pathway.pdf>] -Overfull \hbox (34.84988pt too wide) in paragraph at lines 378--383 +Overfull \hbox (34.84988pt too wide) in paragraph at lines 385--390 \OT1/cmr/m/n/12 curve over log-a-rith-mi-cally com-pressed in-ten-sity lev-els ([]; []). [] -Overfull \hbox (4.40714pt too wide) in paragraph at lines 386--395 +Overfull \hbox (4.40714pt too wide) in paragraph at lines 393--402 \OT1/cmr/m/n/12 the sub-se-quent lo-cal in-terneu-rons ([]; []) [] [7] [8] -Overfull \hbox (9.43962pt too wide) in paragraph at lines 495--495 +Overfull \hbox (9.43962pt too wide) in paragraph at lines 511--511 []\OT1/cmr/bx/n/17.28 Two mech-a-nisms driv-ing the emer-gence of intensity- [] @@ -749,18 +788,18 @@ Package logreq Info: Writing requests to 'main.run.xml'. ) Here is how much of TeX's memory you used: - 19301 strings out of 474222 - 412437 string characters out of 5748732 + 20711 strings out of 474222 + 446040 string characters out of 5748732 1937975 words of memory out of 5000000 - 41320 multiletter control sequences out of 15000+600000 - 567787 words of font info for 73 fonts, out of 8000000 for 9000 - 1141 hyphenation exceptions out of 8191 - 94i,19n,93p,955b,992s stack positions out of 10000i,1000n,20000p,200000b,200000s - -Output written on main.pdf (13 pages, 1440223 bytes). + 42696 multiletter control sequences out of 15000+600000 + 569035 words of font info for 78 fonts, out of 8000000 for 9000 + 1143 hyphenation exceptions out of 8191 + 94i,19n,93p,955b,1732s stack positions out of 10000i,1000n,20000p,200000b,200000s + +Output written on main.pdf (13 pages, 1450935 bytes). PDF statistics: - 1103 PDF objects out of 1200 (max. 8388607) - 699 compressed objects within 7 object streams + 1109 PDF objects out of 1200 (max. 8388607) + 702 compressed objects within 8 object streams 0 named destinations out of 1000 (max. 500000) 18 words of extra memory for PDF output out of 10000 (max. 10000000) diff --git a/main.pdf b/main.pdf index 8124a60..a364d94 100644 Binary files a/main.pdf and b/main.pdf differ diff --git a/main.run.xml b/main.run.xml index a2ccca6..9dbc22a 100644 --- a/main.run.xml +++ b/main.run.xml @@ -58,6 +58,7 @@ authoryear.cbx biblatex.cfg english.lbx + german.lbx diff --git a/main.synctex.gz b/main.synctex.gz index cf48772..878e91f 100644 Binary files a/main.synctex.gz and b/main.synctex.gz differ diff --git a/main.tex b/main.tex index e450dfb..64b077f 100644 --- a/main.tex +++ b/main.tex @@ -10,8 +10,11 @@ \usepackage{parskip} \usepackage{amsmath} \usepackage{amssymb} -\usepackage{subcaption} +\usepackage{subcaption} \usepackage[labelfont=bf, textfont=small]{caption} +\usepackage[german,english]{babel} +\addto\captionsenglish{\renewcommand{\figurename}{Fig.}} +\addto\captionsenglish{\renewcommand{\tablename}{Tab.}} \usepackage[separate-uncertainty=true, locale=DE]{siunitx} \sisetup{output-exponent-marker=\ensuremath{\mathrm{e}}} % \usepackage[capitalize]{cleveref} @@ -66,14 +69,18 @@ \newcommand{\kf}{\omega} % Unspecific Gabor kernel frequency \newcommand{\kp}{\phi} % Unspecific Gabor kernel phase \newcommand{\kn}{n} % Unspecific Gabor kernel lobe number -\newcommand{\ks}{s} % Unspecific Gabor kernel sign +% \newcommand{\ks}{s} % Unspecific Gabor kernel sign \newcommand{\kwi}{\kw_i} % Specific Gabor kernel width \newcommand{\kfi}{\kf_i} % Specific Gabor kernel frequency \newcommand{\kpi}{\kp_i} % Specific Gabor kernel phase \newcommand{\kni}{\kn_i} % Specific Gabor kernel lobe number -\newcommand{\ksi}{\ks_i} % Specific Gabor kernel sign -\newcommand{\rh}{\text{RH}} % Relative Gaussian height for FWRH +% \newcommand{\ksi}{\ks_i} % Specific Gabor kernel sign + +% Math shorthands - Auxiliary kernel parameters: +\newcommand{\fsin}{f_{\text{sin}}} % Carrier frequency +\newcommand{\rh}{h_{\text{rel}}} % Relative Gaussian height for FWRH \newcommand{\fwrh}{\text{FWRH}} % Gaussian full-width at relative height +\newcommand{\off}{\beta_0} % Offset for linear frequency approximation % Math shorthands - Threshold nonlinearity: \newcommand{\thr}{\Theta_i} % Step function threshold value @@ -421,58 +428,62 @@ ascending neuron. We use Gabor kernels as basis functions for creating different template patterns. An arbitrary one-dimensional, real Gabor kernel is generated by multiplication of a Gaussian envelope and a sinusoidal carrier \begin{equation} - k_i(t,\,\kwi,\,\kfi,\,\kpi)\,=\,e^{-\frac{t^{2}}{2{\kwi}^{2}}}\,\cdot\,\sin(\kfi\,t\,+\,\kpi), \qquad \kfi\,=\,2\pi f_{sin} + k_i(t,\,\kwi,\,\kfi,\,\kpi)\,=\,e^{-\frac{t^{2}}{2{\kwi}^{2}}}\,\cdot\,\sin(\kfi\,t\,+\,\kpi), \qquad \kfi\,=\,2\pi\fsin \label{eq:gabor} \end{equation} with Gaussian standard deviation or kernel width $\kwi$, carrier frequency -$\kfi$, and carrier phase $\kpi$. Different combinations of $\kw$, $\kf$, and -$\kp$ result in Gabor kernels with different lobe number $\kn$, which is the -number of half-periods of the carrier that fit under the Gaussian envelope -within reasonable limits of attenuation. These limits are a matter of -definition, since the Gaussian function never fully decays to zero. A good -measure is the Gaussian full-width at relative height, which can be calculated -as +$\kfi$, and carrier phase $\kpi$. Different combinations of $\kw$ and $\kf$ +result in Gabor kernels with different lobe number $\kn$, which is the number +of half-periods of the carrier that fit under the Gaussian envelope within +reasonable limits of attenuation. The interval under the Gaussian envelope that +contains the relevant lobes of the kernel can be defined as Gaussian full-width +measured at relative peak height $\rh$ \begin{equation} - \fwrh(\kw,\,\rh)\,=\,2\,\cdot\,\sqrt{-2\,\ln \rh}\cdot\,\kw, \qquad \rh\,\in\,(0,\,1] + \fwrh(\kw,\,\rh)\,=\,2\,\cdot\,\sqrt{-2\,\cdot\,\ln \rh}\cdot\,\kw, \qquad \rh\,\in\,(0,\,1] \end{equation} With this, an appropriate carrier frequency $\kf$ for obtaining a Gabor kernel -with width $\kw$ and a desired lobe number $\kn$ can be approximated as +with width $\kw$ and desired lobe number $\kn$ can be approximated as +% \begin{equation} +% \kf(\kn,\,\fwrh)\,=\,\frac{0.5\,\cdot\,\kn\,+\,\off}{\fwrh}, \qquad \kn\,\geq\,2\enspace\forall\enspace \kn\,\in\,\mathbb{Z} +% \end{equation} \begin{equation} - \kf(\kn,\,\fwrh)\,=\,\frac{0.5\,\cdot\,\kn\,+\,0.5}{\fwrh} + \kf(\kn,\,\kw,\,\rh)\,=\,\frac{\kn\,+\,\off}{4\,\cdot\,\sqrt{-2\,\cdot\,\ln \rh}}, \qquad \kn\,\geq\,2\enspace\forall\enspace \kn\,\in\,\mathbb{Z} \end{equation} -We restrict the Gabor kernels to be either even functions~(mirror-symmetric, -uneven $\kn$) or odd functions~(point-symmetric, even $\kn$). Under this -condition, phase $\kp$ is related to lobe number $\kn$ by -\begin{equation} - \kp(\kn,\,\ks)\,=\,0.5\,\cdot\,(1\,-\,\text{mod}[\kn,\,2]\,+\,\ks) - \label{eq:gabor_phase} -\end{equation} -which results in the specific phase values shown in -Table\,\mbox{\ref{tab:gabor_phase}}. +where $\off$ is a small positive offset to the near-linear relationship between +$\kf$ and $\kn$ to balance the amplitude of the $\kn$ desired lobes of the +kernel --- which should be maximized --- against the amplitude of the +next-outer lobes, which should not exceed the threshold value determined by +$\rh$. For $\kn=1$, carrier frequency $\kf$ is set to zero, which results in a +simple Gaussian kernel. Carrier phase $\kp$ determines the position of the +kernel lobes relative to the kernel center. By setting $\kp$ to one of only +four specific phase values~(Tab.\,\ref{tab:gabor_phases}), we restrict the +Gabor kernels to be either even functions~(mirror-symmetric, uneven $\kn$) or +odd functions~(point-symmetric, even $\kn$) with either positive or negative +sign, which refers to the sign of the kernel's central lobe (even kernels) or +the left of the two central lobes (odd kernels). \FloatBarrier \begin{table}[!ht] \centering - \captionsetup{width=.55\textwidth} - \caption{} + \captionsetup{width=.46\textwidth} + \caption{Values of phase $\kp$ that are specific for the four major groups + of Gabor kernels.} \begin{tabular}{|ccc|} \hline - sign $\ks$ & even $\kn$ & odd $\kn$\\ + sign & even kernels & odd kernels\\ \hline - +1 & $+\pi\,/\,2$ & $\pi$\\ - -1 & $-\pi\,/\,2$ & $0$\\ + $+$ & $+\pi\,/\,2$ & $\pi$\\ + $-$ & $-\pi\,/\,2$ & $0$\\ \hline \end{tabular} - \label{tab:gabor_phase} + \label{tab:gabor_phases} \end{table} \FloatBarrier - - -\textbf{Stage-specific processing steps and functional approximations:} - -Thresholding nonlinearity in ascending neurons (or further downstream)\\ -- Binarization of AN response traces into "relevant" vs. "irrelevant"\\ -$\rightarrow$ Shifted Heaviside step-function $\nl$ (or steep sigmoid threshold?) -% +These four groups of Gabor kernels allow for the extraction of different types +of signal features, such as the presence of peaks (even, $+$), troughs (even, +$-$), onsets (odd, $+$), and offsets (odd, $-$) at various time scales. +Following the convolutional template matching, each kernel-specific response +$c_i(t)$ is passed through a shifted Heaviside step-function $\nl$ with threshold +value $\thr$ to obtain a binary response \begin{equation} b_i(t,\,\thr)\,=\,\begin{cases} \;1, \quad c_i(t)\,>\,\thr\\ @@ -480,18 +491,23 @@ $\rightarrow$ Shifted Heaviside step-function $\nl$ (or steep sigmoid threshold? \end{cases} \label{eq:binary} \end{equation} -% -Temporal averaging by neurons of the central brain\\ -- Finalized set of slowly changing kernel-specific features (one per AN)\\ -- Different species-specific song patterns are characterized by a distinct combination -of feature values $\rightarrow$ Clusters in high-dimensional feature space\\ -$\rightarrow$ Lowpass filter 1 Hz -% +which can be thought of as a categorization into "relevant" and "irrelevant" +response values. In the grasshopper, these threshold nonlinearities might +either be part of the processing within the ascending neurons or take place +further downstream~(SOURCE). Finally, the responses of the ascending neurons +are assumed to be integrated somewhere in the supraesophageal +ganglion~(\bcite{ronacher1986routes}; \bcite{bauer1987separate}; +\bcite{bhavsar2017brain}). This processing step can be approximated as temporal +averaging of the binary responses $b_i(t)$ by a lowpass filter \begin{equation} f_i(t)\,=\,b_i(t)\,*\,\lp, \qquad \fc\,=\,1\,\text{Hz} \label{eq:lowpass} \end{equation} -% +to obtain a final set of slowly changing kernel-specific features $f_i(t)$. In +the resulting high-dimensional feature space, different species-specific song +patterns are characterized by a distinct combination of feature values, which +can be read out by a simple linear classifier. + \section{Two mechanisms driving the emergence of intensity-invariant song representation} \textbf{Definition of invariance (general, systemic):}\\ @@ -671,4 +687,8 @@ initiation of one behavior over another is categorical (e.g. approach/stay) \section{Conclusions \& outlook} +The model pathway includes a rather large number of Gabor kernels compared to +the 15 to 20 ascending neurons in the grasshopper auditory +system~(\bcite{stumpner1991auditory}). + \end{document} \ No newline at end of file