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Added multi-thresh simulation to "full" and "short" (currently running).

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Added complete "rect-lp" analysis except figure.
Added multiple appendix figs.
Overhauled normalization options across all condense scripts.

Co-authored-by: Copilot <copilot@github.com>
This commit is contained in:
j-hartling
2026-04-24 16:50:14 +02:00
parent 1a586848e8
commit 5411a309f7
48 changed files with 1549 additions and 300 deletions
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python/fig_invariance_log-hp.py
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@@ -270,7 +270,7 @@ plateau_dot_kwargs = dict(
species_measures = {}
thresh_inds = np.zeros((len(target_species),), dtype=int)
for i, species in enumerate(target_species):
spec_path = search_files(species, dir='../data/inv/log_hp/condensed/')[0]
spec_path = search_files(species, incl=['noise', 'norm-base'], dir='../data/inv/log_hp/condensed/')[0]
spec_data = dict(np.load(spec_path))
measure = spec_data['mean_inv'].mean(axis=-1)
if exclude_zero: