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changed for multiple repros

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This commit is contained in:
Carolin Sachgau 2018-11-20 17:21:48 +01:00
parent 1ab2daa258
commit 3bcc6b72ad
1 changed files with 17 additions and 15 deletions
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18
open_nixio_new.py
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@ -18,23 +18,25 @@ for feat in mt.features:
feature_dict.update({feat.data.name[16:]: mt.features[feat.data.name].data[:]}) feature_dict.update({feat.data.name[16:]: mt.features[feat.data.name].data[:]})
tags = b.tags tags = b.tags
intervals_dict = defaultdict(list)
for tag in tags: for tag in tags:
if tag.name.startswith('Baseline'): if tag.name.startswith('Baseline'):
continue continue
curr_comb = tag.metadata["RePro-Info"]["settings"]["object"]
repro_pos, = tag.position repro_pos, = tag.position
repro_ext, = tag.extent repro_ext, = tag.extent
idx_qry = np.logical_and(repro_pos < comb_pos, comb_pos < (repro_pos + repro_ext))
tag_idx = np.flatnonzero(idx_qry)
tag_pos = comb_pos[idx_qry]
tag_idx = np.where(np.logical_and(repro_pos < comb_pos, comb_pos < (repro_pos+repro_ext))) for idx, position in zip(tag_idx, tag_pos):
embed()
quit()
tag_idx_pos = comb_pos[np.logical_and(repro_pos < comb_pos, comb_pos < (repro_pos + repro_ext))]
intervals_dict = defaultdict(list)
for idx, position in enumerate(comb_pos):
if idx == (len(comb_pos)-1): if idx == (len(comb_pos)-1):
break break
curr_speed = feature_dict['speed'][idx] curr_speed = feature_dict['speed'][idx]
curr_pos = comb_pos[idx] curr_pos = comb_pos[idx]
curr_dir = feature_dict['direction'][idx] curr_dir = feature_dict['direction'][idx]
curr_spikes = spikes[(spikes < comb_pos[idx + 1]) & (spikes > comb_pos[idx])] curr_spikes = spikes[(spikes < comb_pos[idx + 1]) & (spikes > comb_pos[idx])]
intervals_dict.update({(tag.name, curr_speed, curr_dir, curr_pos, curr_comb): curr_spikes})
embed()
quit()