LisaVial/torus_ephys
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first plot works

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Lisa 2019-08-08 13:16:12 +02:00
parent 9150263bdd
commit b14fc1a294
1 changed files with 11 additions and 4 deletions

15
ephys_analysis.py
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@ -48,9 +48,16 @@ if __name__ == '__main__':
data_set + '.nix'))
print(len(spike_data))
stims = []
# for i in range(len(stim_pos)):
# embed()
# plt.plot(stim_pos)
for i in range(len(stim_pos)):
stim_y = [-38, -38]
plt.plot([stim_pos[i], stim_pos[i] + stim_extent[i]], stim_y, 'k')
plt.plot(dims[:-1], voltage_trace[:-1])
plt.scatter(spike_data[:-1], np.ones(len(spike_data)-1)*np.max(voltage_trace))
spike_y = np.ones(len(spike_data))*80
for j in range(len(spike_data)):
print('length of current spike train: ', len(spike_data))
for k in range(len(spike_data[j])):
print('current spike time is: ', spike_data[j][k])
plt.plot(spike_data[j][k], -40, 'o', color='k')
plt.ylim([-100, -30])
plt.show()