From d265449d75dd614b7d2e6a1f2320d5aa4c2d1d6d Mon Sep 17 00:00:00 2001
From: "a.ott" <a.ott@student.uni-tuebingen.de>
Date: Tue, 28 Jul 2020 09:31:19 +0200
Subject: [PATCH] recalculate the baseline variables

---
 cell_overview.py | 7 ++++++-
 1 file changed, 6 insertions(+), 1 deletion(-)

diff --git a/cell_overview.py b/cell_overview.py
index c98d042..c10be43 100644
--- a/cell_overview.py
+++ b/cell_overview.py
@@ -8,7 +8,12 @@ import os
 def main():
 
     # plot_visualizations("cells/")
-    full_overview("cells/master_table.csv", "cells/")
+    # full_overview("cells/master_table.csv", "cells/")
+
+    for cell_data in icelldata_of_dir("data/invivo_bursty/", test_for_v1_trace=False):
+        baseline = BaselineCellData(cell_data)
+        baseline.save_values(cell_data.get_data_path())
+
 
 
 def move_rejected_cell_data():