Alexander/P-unit_model
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too much sorry future me -.-

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a.ott
2020-02-14 14:33:58 +01:00
parent ef3c88d744
commit a53d6f4a4e
13 changed files with 673 additions and 29 deletions
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4
introduction/introductionBaseline.py
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@@ -106,7 +106,7 @@ def calculate_vector_strength(times, eods, spiketimes, v1s):
relative_spike_times.extend(rel_spikes)
eod_durations.extend(eod_durs)
vs = __vector_strength__(rel_spikes, eod_durs)
vs = __vector_strength__(np.array(rel_spikes), eod_durs)
phases = calculate_phases(rel_spikes, eod_durs)
plot_polar(phases, "test_phase_locking_" + str(recording) + "_with_vs:" + str(round(vs, 3)) + ".png")
@@ -114,7 +114,7 @@ def calculate_vector_strength(times, eods, spiketimes, v1s):
plot_phaselocking_testfigures(times[recording], eods[recording], spiketimes[recording], v1s[recording])
return __vector_strength__(relative_spike_times, eod_durations)
return __vector_strength__(np.array(relative_spike_times), eod_durations)
def eods_around_spikes(time, eod, spiketimes):

2
introduction/test_minimize.py
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@@ -6,7 +6,7 @@ import numpy as np
def main():
guess = np.zeros(3)
fmin = minimize(fun=cost1, x0=guess, args=(3, 20, -25), method="Nelder-Mead")
print(np.mean(fmin["final_simplex"][0], axis=0))
print(fmin)