Alexander/P-unit_model
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add function to get sam traces

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alexanderott 2021-01-30 15:52:21 +01:00
parent 9eadffee84
commit 8b45d75afa
2 changed files with 13 additions and 0 deletions
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7
parser/CellData.py
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@ -82,6 +82,7 @@ class CellData:
self.sam_eod_freqs = None
self.sam_durations = None
self.sam_trans_amplitudes = None
self.sam_traces = None
self.sampling_interval = None
self.recording_times = None
@ -179,6 +180,12 @@ class CellData:
return contrast
def get_sam_traces(self):
if self.sam_traces is None:
warn("SAM traces might not be sorted in the same way as the spiketimes?!!!")
self.sam_traces = self.parser.get_sam_traces()
return self.sam_traces
def get_sam_spiketimes(self):
self.__read_sam_info__()
return self.sam_spiketimes

6
parser/DataParserFactory.py
View File

@ -40,6 +40,9 @@ class AbstractParser:
def get_fi_frequency_traces(self):
raise NotImplementedError("NOT YET OVERRIDDEN FROM ABSTRACT CLASS")
def get_sam_traces(self):
raise NotImplementedError("NOT YET OVERRIDDEN FROM ABSTRACT CLASS")
def get_sam_info(self):
raise NotImplementedError("NOT YET OVERRIDDEN FROM ABSTRACT CLASS")
@ -279,6 +282,9 @@ class DatParser(AbstractParser):
return trans_amplitudes, intensities, spiketimes
def get_sam_traces(self):
return self.__get_traces__("SAM")
def get_sam_info(self):
contrasts = []
delta_fs = []