diff --git a/sam_experiments.py b/sam_experiments.py index c46e505..50e6539 100644 --- a/sam_experiments.py +++ b/sam_experiments.py @@ -10,10 +10,11 @@ from CellData import CellData from ModelFit import ModelFit, get_best_fit import os + def main(): sam_analysis("results/invivo_results/2013-01-08-ad-invivo-1/") quit() - modelfit = get_best_fit("results/invivo_results/2013-01-08-ad-invivo-1/") + modelfit = get_best_fit("results/invivo_results/2013-01-08-ad-invivo-1/", use_comparable_error=False) if not os.path.exists(os.path.join(modelfit.get_cell_path(), "samallspikes1.dat")): print("Cell: {} \n Has no measured sam stimuli.") @@ -198,11 +199,6 @@ def sam_analysis(fit_path): plt.close() - - - - - def generate_pdf(model, stimulus, trials=4, sim_length=3, kernel_width=0.005): trials_rate_list = []