From 309b30b9fa768e936691a03173bd8c7b9c90dde2 Mon Sep 17 00:00:00 2001
From: alexanderott <a.ott@student.uni-tuebingen.de>
Date: Sun, 3 Jan 2021 13:23:22 +0100
Subject: [PATCH] prepare for 'sam fitting'

---
 run_Fitter.py           | 4 ++--
 run_cellwise_fitting.sh | 2 +-
 2 files changed, 3 insertions(+), 3 deletions(-)

diff --git a/run_Fitter.py b/run_Fitter.py
index 6028e5a..aaa90bb 100644
--- a/run_Fitter.py
+++ b/run_Fitter.py
@@ -14,8 +14,8 @@ from helperFunctions import plot_errors
 
 import multiprocessing as mp
 
-SAVE_DIRECTORY = "./results/ref_and_tau/no_ref_period/"
-SAVE_DIRECTORY_BEST = "./results/ref_and_tau/nrp_best/"
+SAVE_DIRECTORY = "./results/final_sam/"
+SAVE_DIRECTORY_BEST = "./results/final_sam_best/"
 
 # SAVE_DIRECTORY = "./results/ref_and_tau/no_dend_tau/"
 # SAVE_DIRECTORY_BEST = "./results/ref_and_tau/ndt_best/"
diff --git a/run_cellwise_fitting.sh b/run_cellwise_fitting.sh
index 62115e9..55fa4da 100755
--- a/run_cellwise_fitting.sh
+++ b/run_cellwise_fitting.sh
@@ -1,5 +1,5 @@
 
-for file in data/ref_and_dend_set/*; do
+for file in data/final_sam/*; do
     if [ -d "$file" ]; then
         nice python3 run_Fitter.py --cell $file
     fi